Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_007348 |
Length | 2,726,152 |
Click here to switch to the map view.
The map label for this gene is 73539143
Identifier: 73539143
GI number: 73539143
Start: 2085060
End: 2086841
Strand: Reverse
Name: 73539143
Synonym: Reut_B5320
Alternate gene names: NA
Gene position: 2086841-2085060 (Counterclockwise)
Preceding gene: 73539146
Following gene: 73539142
Centisome position: 76.55
GC content: 69.64
Gene sequence:
>1782_bases ATGCCATCCGTTCCGTCTGAAGCCGCACCTCGCCTGCACTGGCTGCCCGCGCCCGGGAGCTGGCAATACCACGTGCTGCT CGGCGCGGCGGGCATGCTGGTGCTCGGCCCGCTGGGCGGGATTGCCGCGGCGTACATGAACTTCTCGCTGGGCTTCTTCG TGGGCGGGCAGGTGCTGGCCGGCATACTCGGCTCGGTGGTGACCTGCGGCTACGGCGCGTCCGGCCGGCATGGCGCGAAC TACATCCAGACCGCGGCCGCCTCGGTGGCCGGCATGGGCGGCATGGCGGTGGTGATCCAGGCGATGAGCTGGCTCGGGCT CGCGCAGCCGCCGCTTTGGCAACTCATGGGGTACATGCTGTGCATCGGCATGTATGGCGTCGGCGTCGGCATGCTGTACA CGCCCCTGCTGGTCGACCGCATGCAGCTGACGTTTCCGTCGGGCCTGGCGGTCGCTAATATCCTGCGCGCGCTGACCGAT CCACCGCTGCTACGCCGCGCGGTGTCGCGGTTGGGCGGCGGCATGGCGGTGGGGCTGGCAAGTGGATTGTGGCTGTCCCG TCTCGCGCCGCTGGCCGCGCTCGATATCTCGGCATCGACCTTCGGCGCGGGGATGATCGTCAGCGCGCGCATCGGCATTG CCGCGCTGACCGGCGGGCTCGCAGGCTGGGCGATGACGCCGTACTTCGTCTCGATCGGCTGGCTGGCGCCGGGCGACCCA TACCGCAAGATCACGTTCCTGATCGCGCTCGGCATGATCGTGGGCGCCGCGGTGGTGGACGTTTCGCTGCTGGCGGCGCG CGCATGGCGGCAGTGGCGCGACCGTGCAGCGCCCGCGGTCGCGCGTGTCGACGGGCCTGGCATGCGCTGGGTCGTGGCAT GGGTGCTCCTGTGGGGCGCGGCGGTGGTCGCGGCGGGGGTGGCCTGGTTCGGGCAGCCTCTCGGCTATCAGTTGATGGCG GTGCTGCTGGTAGTGGTGTTTGCGCTGGTCAACGGCATTTCGGTCGGCATGGTCGACCAGAACCCGATCTCGTCGGCGTT CGTGCTGTGCGTGATCCTGATGGCGGCAGCAGGGCTGCGTGCGCCGCACGTCGGCCTGATCGCCGCGACGGTGCTGCTGG TGTCCACCGCCGAGGCCTGCGACATGCAGCAGGACCGCTCGACGGGCTGGCGCCTTGGCAGCCGCCGCATGGTGCAGTTC GGCTATCAGGTGGCGGGGATCATCGTCGGGGCGCTGCTCGCAGTCGCCCTCGCGCGGCTGTTCATGCAGGCGTATCCGGT GCTGGCGCTGGACCAGACCACGCTCACGGCCGACCAGCAGCCAGCGCGCTGGACCTCGGCGATGACCTACAAGATCGTTG GCGTGCTGCGCGGACTGGCCGAGTCGCGCGGCTATCAGCATCTGGCCGTCATCATCGGCGTGGCGATTGGCCTGGTGACT GAAGTGCTGCGCAAGGCGCTGCGCGCGCATGACGGCTACGTGCGTTTTGCTCAATCCGGTCGAACTGGCAGGGCGCTGGA TTTCGCGCTGGACGCCGTCTTGCTGCCTTCGCCGTATGCGTCGTCGTTCGGTGGCTTCGTCAATCTGCCCGCCGCGGCAT GGATGGCGGCCGGCGGCATCGTGGCCGGCCTGACCGAGGGATTCGGCGCGCGTCGCCCAAGCCGTTCCCTGCCAGAGGAC ATGAGCACCCCATCGCTGATTGGCGGCGGCATGATCGCCGGCGACGCGCTGGCCGCGCTGGCCATCGGCATGGCAGGACT GTTGGCCGTCACACGCGGCTGA
Upstream 100 bases:
>100_bases CGACATAATAGTTGCGCACGAAACTAGCGTAAACCCCGGCGTTCGATACTCTCGCCTATGCTTTGCAGGAAGCACTTCTC CGGCTCATTGTGTGTCTGCC
Downstream 100 bases:
>100_bases CTGTCAAATTTTATTGACGCTTCTGTCCAATGTGGGATGGATTGTCAAATCAGATGGCGCGCGTACCATTGCGCCAAGAC TGTCGAACTGGCTTGACTGG
Product: OPT superfamily oligopeptide transporter
Products: NA
Alternate protein names: OPT Superfamily Oligopeptide Transporter
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MPSVPSEAAPRLHWLPAPGSWQYHVLLGAAGMLVLGPLGGIAAAYMNFSLGFFVGGQVLAGILGSVVTCGYGASGRHGAN YIQTAAASVAGMGGMAVVIQAMSWLGLAQPPLWQLMGYMLCIGMYGVGVGMLYTPLLVDRMQLTFPSGLAVANILRALTD PPLLRRAVSRLGGGMAVGLASGLWLSRLAPLAALDISASTFGAGMIVSARIGIAALTGGLAGWAMTPYFVSIGWLAPGDP YRKITFLIALGMIVGAAVVDVSLLAARAWRQWRDRAAPAVARVDGPGMRWVVAWVLLWGAAVVAAGVAWFGQPLGYQLMA VLLVVVFALVNGISVGMVDQNPISSAFVLCVILMAAAGLRAPHVGLIAATVLLVSTAEACDMQQDRSTGWRLGSRRMVQF GYQVAGIIVGALLAVALARLFMQAYPVLALDQTTLTADQQPARWTSAMTYKIVGVLRGLAESRGYQHLAVIIGVAIGLVT EVLRKALRAHDGYVRFAQSGRTGRALDFALDAVLLPSPYASSFGGFVNLPAAAWMAAGGIVAGLTEGFGARRPSRSLPED MSTPSLIGGGMIAGDALAALAIGMAGLLAVTRG
Sequences:
>Translated_593_residues MPSVPSEAAPRLHWLPAPGSWQYHVLLGAAGMLVLGPLGGIAAAYMNFSLGFFVGGQVLAGILGSVVTCGYGASGRHGAN YIQTAAASVAGMGGMAVVIQAMSWLGLAQPPLWQLMGYMLCIGMYGVGVGMLYTPLLVDRMQLTFPSGLAVANILRALTD PPLLRRAVSRLGGGMAVGLASGLWLSRLAPLAALDISASTFGAGMIVSARIGIAALTGGLAGWAMTPYFVSIGWLAPGDP YRKITFLIALGMIVGAAVVDVSLLAARAWRQWRDRAAPAVARVDGPGMRWVVAWVLLWGAAVVAAGVAWFGQPLGYQLMA VLLVVVFALVNGISVGMVDQNPISSAFVLCVILMAAAGLRAPHVGLIAATVLLVSTAEACDMQQDRSTGWRLGSRRMVQF GYQVAGIIVGALLAVALARLFMQAYPVLALDQTTLTADQQPARWTSAMTYKIVGVLRGLAESRGYQHLAVIIGVAIGLVT EVLRKALRAHDGYVRFAQSGRTGRALDFALDAVLLPSPYASSFGGFVNLPAAAWMAAGGIVAGLTEGFGARRPSRSLPED MSTPSLIGGGMIAGDALAALAIGMAGLLAVTRG >Mature_592_residues PSVPSEAAPRLHWLPAPGSWQYHVLLGAAGMLVLGPLGGIAAAYMNFSLGFFVGGQVLAGILGSVVTCGYGASGRHGANY IQTAAASVAGMGGMAVVIQAMSWLGLAQPPLWQLMGYMLCIGMYGVGVGMLYTPLLVDRMQLTFPSGLAVANILRALTDP PLLRRAVSRLGGGMAVGLASGLWLSRLAPLAALDISASTFGAGMIVSARIGIAALTGGLAGWAMTPYFVSIGWLAPGDPY RKITFLIALGMIVGAAVVDVSLLAARAWRQWRDRAAPAVARVDGPGMRWVVAWVLLWGAAVVAAGVAWFGQPLGYQLMAV LLVVVFALVNGISVGMVDQNPISSAFVLCVILMAAAGLRAPHVGLIAATVLLVSTAEACDMQQDRSTGWRLGSRRMVQFG YQVAGIIVGALLAVALARLFMQAYPVLALDQTTLTADQQPARWTSAMTYKIVGVLRGLAESRGYQHLAVIIGVAIGLVTE VLRKALRAHDGYVRFAQSGRTGRALDFALDAVLLPSPYASSFGGFVNLPAAAWMAAGGIVAGLTEGFGARRPSRSLPEDM STPSLIGGGMIAGDALAALAIGMAGLLAVTRG
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61452; Mature: 61321
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVPSEAAPRLHWLPAPGSWQYHVLLGAAGMLVLGPLGGIAAAYMNFSLGFFVGGQVLA CCCCCCCCCCCEEEECCCCCCEEEEHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GILGSVVTCGYGASGRHGANYIQTAAASVAGMGGMAVVIQAMSWLGLAQPPLWQLMGYML HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH CIGMYGVGVGMLYTPLLVDRMQLTFPSGLAVANILRALTDPPLLRRAVSRLGGGMAVGLA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHH SGLWLSRLAPLAALDISASTFGAGMIVSARIGIAALTGGLAGWAMTPYFVSIGWLAPGDP HHHHHHHHCCHHHEECCCHHCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHEECCCCCCCH YRKITFLIALGMIVGAAVVDVSLLAARAWRQWRDRAAPAVARVDGPGMRWVVAWVLLWGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHH AVVAAGVAWFGQPLGYQLMAVLLVVVFALVNGISVGMVDQNPISSAFVLCVILMAAAGLR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCC APHVGLIAATVLLVSTAEACDMQQDRSTGWRLGSRRMVQFGYQVAGIIVGALLAVALARL CCCHHHHHHHHHHHHHHHHHCCHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FMQAYPVLALDQTTLTADQQPARWTSAMTYKIVGVLRGLAESRGYQHLAVIIGVAIGLVT HHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EVLRKALRAHDGYVRFAQSGRTGRALDFALDAVLLPSPYASSFGGFVNLPAAAWMAAGGI HHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCCHHHCCCCEECCHHHHHHHCCH VAGLTEGFGARRPSRSLPEDMSTPSLIGGGMIAGDALAALAIGMAGLLAVTRG HHHHHHCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSVPSEAAPRLHWLPAPGSWQYHVLLGAAGMLVLGPLGGIAAAYMNFSLGFFVGGQVLA CCCCCCCCCCEEEECCCCCCEEEEHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GILGSVVTCGYGASGRHGANYIQTAAASVAGMGGMAVVIQAMSWLGLAQPPLWQLMGYML HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH CIGMYGVGVGMLYTPLLVDRMQLTFPSGLAVANILRALTDPPLLRRAVSRLGGGMAVGLA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHH SGLWLSRLAPLAALDISASTFGAGMIVSARIGIAALTGGLAGWAMTPYFVSIGWLAPGDP HHHHHHHHCCHHHEECCCHHCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHEECCCCCCCH YRKITFLIALGMIVGAAVVDVSLLAARAWRQWRDRAAPAVARVDGPGMRWVVAWVLLWGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHH AVVAAGVAWFGQPLGYQLMAVLLVVVFALVNGISVGMVDQNPISSAFVLCVILMAAAGLR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCC APHVGLIAATVLLVSTAEACDMQQDRSTGWRLGSRRMVQFGYQVAGIIVGALLAVALARL CCCHHHHHHHHHHHHHHHHHCCHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FMQAYPVLALDQTTLTADQQPARWTSAMTYKIVGVLRGLAESRGYQHLAVIIGVAIGLVT HHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EVLRKALRAHDGYVRFAQSGRTGRALDFALDAVLLPSPYASSFGGFVNLPAAAWMAAGGI HHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCCHHHCCCCEECCHHHHHHHCCH VAGLTEGFGARRPSRSLPEDMSTPSLIGGGMIAGDALAALAIGMAGLLAVTRG HHHHHHCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA