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The map label for this gene is yhfR [C]

Identifier: 73539122

GI number: 73539122

Start: 2059442

End: 2060146

Strand: Direct

Name: yhfR [C]

Synonym: Reut_B5299

Alternate gene names: 73539122

Gene position: 2059442-2060146 (Clockwise)

Preceding gene: 73539121

Following gene: 73539123

Centisome position: 75.54

GC content: 65.53

Gene sequence:

>705_bases
ATGACCAAACTGAACAGCGTCTCCGACGCGATCATCCGCTCCATCGAATCCGGCGCCCTGCGCGAGGGCGACCGCCTGCC
GTCAGAGGCAGAGCTGGCCGCCATGCACGGCGTAAGCGTCGGCACCATTCAGAAAGCGCTGATCCGGCTGACGCACTCAG
GACTGATCACGCGCGAGCAGGGGCGCGGCACGTTCGTATCCGGTACGCGCGTCGCGCCGGCGGACGTACGCTACCTGCGC
TTCCGCGACGAAGAGGGCAACGAACTGCCGTCGTACGTCCACGCGCGCTCGGTCAAGCGCATCAAGAAGAAGGGGCCGTG
GGCAGACTTCCTCGAAGGCGATGGCTACGTGCGCATCGAGCGCGTGATCAACGTCGGCGGCCGCTTTGACCTGTACAGCG
AGTTCTGGCTGCGCGAGGAAGACTTCGCCCAATTGGGCGGCCTGGACCGCGAGGCACTGGAAAAGAACCTGCGCGAGCTG
ATCGGCCAGCGCCTGTCGCTGCCGACGCTGCGCGTGGACCAGTGGATCCGCTTTGAAAAGCCGCCGGCAACGGTCGCGCG
CCAGCTTGGCATCGACCCCGAGGCTCCGGCCTTCATCATGGAAATGCGCGGCTACACGCTGCGCGACCAGCCGCTCTACT
ACCAGTCGGTCTATGCCGCGCCGTTCACCGAGCGGCTGATGATCGTGCGGGAGAAATCGTCATGA

Upstream 100 bases:

>100_bases
CTATGCGATGGATATCGCATCGGGCACGCAGCTGACCAGCGAGGTGCTCGATGTCCGGGAGACCGCGATCAGTCGATTCG
CACTGAGCCTCTGAGCAACC

Downstream 100 bases:

>100_bases
CGACCCGATGGAATGTCCAAGGCCTGGAGCAATGGACGTCGGCCGTATTCGAATCGTGCGGCGTGGCGCCCGAGCATGCC
GTCGAGGCCGCCGCCGCGCT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcription Regulator Protein; GntR-Family Transcriptional Regulator; Transcriptional Regulator Protein; GntR Family Regulatory Protein; Transcriptional Regulator GntR Family Protein; GntR Family Transcription Regulator Protein; Regulatory Protein GntR HTH

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTKLNSVSDAIIRSIESGALREGDRLPSEAELAAMHGVSVGTIQKALIRLTHSGLITREQGRGTFVSGTRVAPADVRYLR
FRDEEGNELPSYVHARSVKRIKKKGPWADFLEGDGYVRIERVINVGGRFDLYSEFWLREEDFAQLGGLDREALEKNLREL
IGQRLSLPTLRVDQWIRFEKPPATVARQLGIDPEAPAFIMEMRGYTLRDQPLYYQSVYAAPFTERLMIVREKSS

Sequences:

>Translated_234_residues
MTKLNSVSDAIIRSIESGALREGDRLPSEAELAAMHGVSVGTIQKALIRLTHSGLITREQGRGTFVSGTRVAPADVRYLR
FRDEEGNELPSYVHARSVKRIKKKGPWADFLEGDGYVRIERVINVGGRFDLYSEFWLREEDFAQLGGLDREALEKNLREL
IGQRLSLPTLRVDQWIRFEKPPATVARQLGIDPEAPAFIMEMRGYTLRDQPLYYQSVYAAPFTERLMIVREKSS
>Mature_233_residues
TKLNSVSDAIIRSIESGALREGDRLPSEAELAAMHGVSVGTIQKALIRLTHSGLITREQGRGTFVSGTRVAPADVRYLRF
RDEEGNELPSYVHARSVKRIKKKGPWADFLEGDGYVRIERVINVGGRFDLYSEFWLREEDFAQLGGLDREALEKNLRELI
GQRLSLPTLRVDQWIRFEKPPATVARQLGIDPEAPAFIMEMRGYTLRDQPLYYQSVYAAPFTERLMIVREKSS

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26599; Mature: 26468

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLNSVSDAIIRSIESGALREGDRLPSEAELAAMHGVSVGTIQKALIRLTHSGLITREQ
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEC
GRGTFVSGTRVAPADVRYLRFRDEEGNELPSYVHARSVKRIKKKGPWADFLEGDGYVRIE
CCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEE
RVINVGGRFDLYSEFWLREEDFAQLGGLDREALEKNLRELIGQRLSLPTLRVDQWIRFEK
EECCCCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCC
PPATVARQLGIDPEAPAFIMEMRGYTLRDQPLYYQSVYAAPFTERLMIVREKSS
CHHHHHHHHCCCCCCCHHHHHHCCCEECCCCCHHHHHHCCCHHHHEEEEEECCC
>Mature Secondary Structure 
TKLNSVSDAIIRSIESGALREGDRLPSEAELAAMHGVSVGTIQKALIRLTHSGLITREQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEC
GRGTFVSGTRVAPADVRYLRFRDEEGNELPSYVHARSVKRIKKKGPWADFLEGDGYVRIE
CCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEE
RVINVGGRFDLYSEFWLREEDFAQLGGLDREALEKNLRELIGQRLSLPTLRVDQWIRFEK
EECCCCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCC
PPATVARQLGIDPEAPAFIMEMRGYTLRDQPLYYQSVYAAPFTERLMIVREKSS
CHHHHHHHHCCCCCCCHHHHHHCCCEECCCCCHHHHHHCCCHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA