| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is citB [H]
Identifier: 73538972
GI number: 73538972
Start: 1888087
End: 1889298
Strand: Reverse
Name: citB [H]
Synonym: Reut_B5147
Alternate gene names: 73538972
Gene position: 1889298-1888087 (Counterclockwise)
Preceding gene: 73538973
Following gene: 73538971
Centisome position: 69.3
GC content: 67.16
Gene sequence:
>1212_bases ATGAAGCAGCTTGAGGCACTCGTGCGCGAGGCTGAAGATACGGCCGTCGCGGCCGCGGCCGACATCTCTCAGACCCGTGA ACGCAGGATCATCCCGATCCAGGCGCTGCCGCTGACCGACAACGAAGCCGAGGTTGCCCGCCAGATGCAGATCTGCAATG CCTGTCGCTACTGCGAGGGCTTCTGCGCGGTGTTTCCGGCCATGACGCGGCGCCTGTCCTTCGGCAAGGCGGACATCAAT TACCTGGCCAACCTGTGCCACAACTGCGGTGCCTGCTACCACGCCTGCCAGTACGCGCCGCCGCACGAGTTCGCGGTGAA CGTACCGCAAGCCATGGCGCGGGTGCGTGGCGAGACCTACGCCGAATATGCATGGCCCGCGCCGCTGGGCGCGCTGTACC GGCGCAACGGTCTCACCGTGGCACTGGCGCTGGCCTTTGGCCTCGCCTTGTTCCTGCTGCTGGCCGTGGCGCGCCACGGC GCCTTGTGGCACGCACCGCTGGCCGGCAACTTCTATGCGATCTTTCCGCACAACATGATGGCCGCGATGTTCGGGGCGGT GTTCGGCTTCGCAGTGCTGTCGCTGGGCATCGGTGTGCGGAAGTTCTGGCGCGATGTGTCGCCTGGCCACGCGACGCCGC CTGCCCTGAAGGAGGCCGCCGCTGACGCGCTGACGCTGACCTATCTCGACGGCGGACACGGCCAGGGGTGCAACGAGCAG GACGATCGCTTTACGCTGGCGCGTCGCCGCTTCCATCACCTGACGTTCTACGGCTTCACGGCCTGCTTTGCGTCCACCGG CGTGGCGACGCTGTACCACTACCTGCTGGATCTCCACGCGCCGTATCCGGTGACGAGCCTGCCTGTGATGCTTGGGTCGG CCGGCGGAATCGGGCTGCTCGTCGGCCCTGCTGGCCTGCTATGGCTGAATCTGCGGCGCGACCCCAACCGCGGCGATGCC GCCCAGCGTCCCATGGATCGTGGCTTCATCGCGCTGCTGCTGCTGACCGCGGCTACCGGCCTTGCCTTGCTCGCCGGCCG TGATACCGGCGCCATGGCCACGCTGTTGGCCGTCCACCTCGGCGTGGTGATGGCGCTGTTCGCCACGCTGCCGTTCGGCA AGTTCGCCCACGGCATCTACCGCTGCGCGGCGCTATTGAAGTCGGCCATCGAAAAGCGCCAGCCGAACTCGCTGCAGCTC GGTTCGGACTGA
Upstream 100 bases:
>100_bases GGCTACACGGCGGGCGTCGGCATGTCGATTGGCACCGCCTTCGGCCGTATTGCGGGCACCCGCGCCGCGCGCGCGGCCGC ACAAGCCAAAGGAGTACAAC
Downstream 100 bases:
>100_bases GGCAGTCCCAACCTCCAATGCGCTCAGGCACCGGCGTTTGCTACCCGCGGCGCCGACAAGAACATCATCGAACCCCAAGG AGACAGTCGCATGTTTGACA
Product: 4Fe-4S ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MKQLEALVREAEDTAVAAAADISQTRERRIIPIQALPLTDNEAEVARQMQICNACRYCEGFCAVFPAMTRRLSFGKADIN YLANLCHNCGACYHACQYAPPHEFAVNVPQAMARVRGETYAEYAWPAPLGALYRRNGLTVALALAFGLALFLLLAVARHG ALWHAPLAGNFYAIFPHNMMAAMFGAVFGFAVLSLGIGVRKFWRDVSPGHATPPALKEAAADALTLTYLDGGHGQGCNEQ DDRFTLARRRFHHLTFYGFTACFASTGVATLYHYLLDLHAPYPVTSLPVMLGSAGGIGLLVGPAGLLWLNLRRDPNRGDA AQRPMDRGFIALLLLTAATGLALLAGRDTGAMATLLAVHLGVVMALFATLPFGKFAHGIYRCAALLKSAIEKRQPNSLQL GSD
Sequences:
>Translated_403_residues MKQLEALVREAEDTAVAAAADISQTRERRIIPIQALPLTDNEAEVARQMQICNACRYCEGFCAVFPAMTRRLSFGKADIN YLANLCHNCGACYHACQYAPPHEFAVNVPQAMARVRGETYAEYAWPAPLGALYRRNGLTVALALAFGLALFLLLAVARHG ALWHAPLAGNFYAIFPHNMMAAMFGAVFGFAVLSLGIGVRKFWRDVSPGHATPPALKEAAADALTLTYLDGGHGQGCNEQ DDRFTLARRRFHHLTFYGFTACFASTGVATLYHYLLDLHAPYPVTSLPVMLGSAGGIGLLVGPAGLLWLNLRRDPNRGDA AQRPMDRGFIALLLLTAATGLALLAGRDTGAMATLLAVHLGVVMALFATLPFGKFAHGIYRCAALLKSAIEKRQPNSLQL GSD >Mature_403_residues MKQLEALVREAEDTAVAAAADISQTRERRIIPIQALPLTDNEAEVARQMQICNACRYCEGFCAVFPAMTRRLSFGKADIN YLANLCHNCGACYHACQYAPPHEFAVNVPQAMARVRGETYAEYAWPAPLGALYRRNGLTVALALAFGLALFLLLAVARHG ALWHAPLAGNFYAIFPHNMMAAMFGAVFGFAVLSLGIGVRKFWRDVSPGHATPPALKEAAADALTLTYLDGGHGQGCNEQ DDRFTLARRRFHHLTFYGFTACFASTGVATLYHYLLDLHAPYPVTSLPVMLGSAGGIGLLVGPAGLLWLNLRRDPNRGDA AQRPMDRGFIALLLLTAATGLALLAGRDTGAMATLLAVHLGVVMALFATLPFGKFAHGIYRCAALLKSAIEKRQPNSLQL GSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012830 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43503; Mature: 43503
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLEALVREAEDTAVAAAADISQTRERRIIPIQALPLTDNEAEVARQMQICNACRYCEG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH FCAVFPAMTRRLSFGKADINYLANLCHNCGACYHACQYAPPHEFAVNVPQAMARVRGETY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHCCCHH AEYAWPAPLGALYRRNGLTVALALAFGLALFLLLAVARHGALWHAPLAGNFYAIFPHNMM HHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCHHHH AAMFGAVFGFAVLSLGIGVRKFWRDVSPGHATPPALKEAAADALTLTYLDGGHGQGCNEQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCC DDRFTLARRRFHHLTFYGFTACFASTGVATLYHYLLDLHAPYPVTSLPVMLGSAGGIGLL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEE VGPAGLLWLNLRRDPNRGDAAQRPMDRGFIALLLLTAATGLALLAGRDTGAMATLLAVHL ECCCCEEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH GVVMALFATLPFGKFAHGIYRCAALLKSAIEKRQPNSLQLGSD HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKQLEALVREAEDTAVAAAADISQTRERRIIPIQALPLTDNEAEVARQMQICNACRYCEG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH FCAVFPAMTRRLSFGKADINYLANLCHNCGACYHACQYAPPHEFAVNVPQAMARVRGETY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHCCCHH AEYAWPAPLGALYRRNGLTVALALAFGLALFLLLAVARHGALWHAPLAGNFYAIFPHNMM HHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCHHHH AAMFGAVFGFAVLSLGIGVRKFWRDVSPGHATPPALKEAAADALTLTYLDGGHGQGCNEQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCC DDRFTLARRRFHHLTFYGFTACFASTGVATLYHYLLDLHAPYPVTSLPVMLGSAGGIGLL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEE VGPAGLLWLNLRRDPNRGDAAQRPMDRGFIALLLLTAATGLALLAGRDTGAMATLLAVHL ECCCCEEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH GVVMALFATLPFGKFAHGIYRCAALLKSAIEKRQPNSLQLGSD HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2999088; 3065141 [H]