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The map label for this gene is ifcA [H]

Identifier: 73538973

GI number: 73538973

Start: 1889285

End: 1890694

Strand: Reverse

Name: ifcA [H]

Synonym: Reut_B5148

Alternate gene names: 73538973

Gene position: 1890694-1889285 (Counterclockwise)

Preceding gene: 73538974

Following gene: 73538972

Centisome position: 69.35

GC content: 66.45

Gene sequence:

>1410_bases
ATGTGGGACGTACTCGTAATCGGCGGGGGCAACGCGGCGCTGTGCGCGGCCCTCATGGCGCGCGAAGCTGGCGCCAGCGT
GCTGCTGCTGGAAGCTGCGCCGAAGGCCTGGCGCGGCGGCAACTCCCAGCACACCCGCAATCTGCGATGCATGCACGATG
CGCCCCAGGACGTGCTGGTCGACAGCTACCCCGAGGAGGAGTACTGGCAGGACCTGCTCAAGGTCACCGGTGGTATCACC
AATGAGGCGCTGGCGCGCCTGGTGATCCGCGCTTCATCGACCTGCCGGCCGTGGATGCGCCGCCACGGCGTACATTTTCA
GCCGCCCCTGTCGGGCGCGCTGCATGTCGCCCGCACCAATGCCTTCTTCATGGGCGGCGGCAAGGCCCTGGTGAATGCCT
ACTATCGCAGCGCCGAAAACCTTGGGGTAGAGATCCGCTACGAAACGCCGGTCGATGCCATCGAACTCGATGGCAGCCGG
TTCGTGGCCGCGCGCAGCGGGGCACAGCGCTTCCAGGCGCGTACCTGCGTGCTGGCCGCGGGCGGCTTCGAATCGAACCG
GGAATGGCTGCGCGAAGCGTGGGGCCGCAACGAGCGCGGCGAATGGCCGGCCGACAACTTCCTGATCCGCGGCACACGGT
TCAATATGGGAGTACTGCTCAAGCACATGATCGAGGCGGGCGCCGATGCTATCGGTGATCCGTCGCAATCGCACTGTGTG
GCCATCGACGCGCGTGCGCCGCCGTATGACGGCGGCATCTGCACGCGCATCGATTGCGTGTCGCTAGGCGTGGTGGTGAA
CCGCGACGCCGAGCGCTTCTATGACGAGGGCGAGGATTTCTGGCCGAAGCGCTACGCGATATGGGGCCGCCTGGTGGCCC
AGCAACCGGGCCAGATCGCTTACTCGATCATCGATGCCAAGGCTATCGGCCGCTTCATGCCGCCGGTCTTCCCCGGCACG
GTAGCCGATACGCTGCCCGAACTCGCGCGCAAGCTGGGTCTGCCGGAACAGGCATTTGTGAAGAGCGTGGCCGACTACAA
CGCCGGCTGCCGGCCCGGCACGTTCGACCATACGACGCTGGATGACTGCCGCACCGAAGGGCTGACGCCGCCGAAGACGC
ACTGGGCACGGCCCATCGACACCGCGCCGTTCTATGGCTATGCGCTGCGTCCTGGCATCACGTTCACCTACCTCGGCCTG
AAGGTCGACGAGCACGCCGCCGTGCATTTTGGCGGCGAGCCGAGCGACAACCTGTTCGTCGCTGGCGAGATGATGGCCGG
CAATGTGCTTGGCAAGGGCTACACGGCGGGCGTCGGCATGTCGATTGGCACCGCCTTCGGCCGTATTGCGGGCACCCGCG
CCGCGCGCGCGGCCGCACAAGCCAAAGGAGTACAACATGAAGCAGCTTGA

Upstream 100 bases:

>100_bases
GGGCGACCCTTCACGATTCCTAAACACCTGTTTCCCGCCCCCTTCTGGCGGGCGCCCGCCCCGCTCAGTACAGTCGCAGC
CAACAACGGAGACTGTACTC

Downstream 100 bases:

>100_bases
GGCACTCGTGCGCGAGGCTGAAGATACGGCCGTCGCGGCCGCGGCCGACATCTCTCAGACCCGTGAACGCAGGATCATCC
CGATCCAGGCGCTGCCGCTG

Product: tricarballylate dehydrogenase

Products: NA

Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MWDVLVIGGGNAALCAALMAREAGASVLLLEAAPKAWRGGNSQHTRNLRCMHDAPQDVLVDSYPEEEYWQDLLKVTGGIT
NEALARLVIRASSTCRPWMRRHGVHFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAENLGVEIRYETPVDAIELDGSR
FVAARSGAQRFQARTCVLAAGGFESNREWLREAWGRNERGEWPADNFLIRGTRFNMGVLLKHMIEAGADAIGDPSQSHCV
AIDARAPPYDGGICTRIDCVSLGVVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIAYSIIDAKAIGRFMPPVFPGT
VADTLPELARKLGLPEQAFVKSVADYNAGCRPGTFDHTTLDDCRTEGLTPPKTHWARPIDTAPFYGYALRPGITFTYLGL
KVDEHAAVHFGGEPSDNLFVAGEMMAGNVLGKGYTAGVGMSIGTAFGRIAGTRAARAAAQAKGVQHEAA

Sequences:

>Translated_469_residues
MWDVLVIGGGNAALCAALMAREAGASVLLLEAAPKAWRGGNSQHTRNLRCMHDAPQDVLVDSYPEEEYWQDLLKVTGGIT
NEALARLVIRASSTCRPWMRRHGVHFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAENLGVEIRYETPVDAIELDGSR
FVAARSGAQRFQARTCVLAAGGFESNREWLREAWGRNERGEWPADNFLIRGTRFNMGVLLKHMIEAGADAIGDPSQSHCV
AIDARAPPYDGGICTRIDCVSLGVVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIAYSIIDAKAIGRFMPPVFPGT
VADTLPELARKLGLPEQAFVKSVADYNAGCRPGTFDHTTLDDCRTEGLTPPKTHWARPIDTAPFYGYALRPGITFTYLGL
KVDEHAAVHFGGEPSDNLFVAGEMMAGNVLGKGYTAGVGMSIGTAFGRIAGTRAARAAAQAKGVQHEAA
>Mature_469_residues
MWDVLVIGGGNAALCAALMAREAGASVLLLEAAPKAWRGGNSQHTRNLRCMHDAPQDVLVDSYPEEEYWQDLLKVTGGIT
NEALARLVIRASSTCRPWMRRHGVHFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAENLGVEIRYETPVDAIELDGSR
FVAARSGAQRFQARTCVLAAGGFESNREWLREAWGRNERGEWPADNFLIRGTRFNMGVLLKHMIEAGADAIGDPSQSHCV
AIDARAPPYDGGICTRIDCVSLGVVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIAYSIIDAKAIGRFMPPVFPGT
VADTLPELARKLGLPEQAFVKSVADYNAGCRPGTFDHTTLDDCRTEGLTPPKTHWARPIDTAPFYGYALRPGITFTYLGL
KVDEHAAVHFGGEPSDNLFVAGEMMAGNVLGKGYTAGVGMSIGTAFGRIAGTRAARAAAQAKGVQHEAA

Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 50896; Mature: 50896

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDVLVIGGGNAALCAALMAREAGASVLLLEAAPKAWRGGNSQHTRNLRCMHDAPQDVLV
CEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCCEEEECCCCCHHHC
DSYPEEEYWQDLLKVTGGITNEALARLVIRASSTCRPWMRRHGVHFQPPLSGALHVARTN
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEECC
AFFMGGGKALVNAYYRSAENLGVEIRYETPVDAIELDGSRFVAARSGAQRFQARTCVLAA
EEEECCCHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCEEEEECCHHHHHHHEEEEEEE
GGFESNREWLREAWGRNERGEWPADNFLIRGTRFNMGVLLKHMIEAGADAIGDPSQSHCV
CCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEE
AIDARAPPYDGGICTRIDCVSLGVVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIA
EEECCCCCCCCCCEEEEEHEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEE
YSIIDAKAIGRFMPPVFPGTVADTLPELARKLGLPEQAFVKSVADYNAGCRPGTFDHTTL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCH
DDCRTEGLTPPKTHWARPIDTAPFYGYALRPGITFTYLGLKVDEHAAVHFGGEPSDNLFV
HHHHHCCCCCCHHHCCCCCCCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEE
AGEMMAGNVLGKGYTAGVGMSIGTAFGRIAGTRAARAAAQAKGVQHEAA
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MWDVLVIGGGNAALCAALMAREAGASVLLLEAAPKAWRGGNSQHTRNLRCMHDAPQDVLV
CEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCCEEEECCCCCHHHC
DSYPEEEYWQDLLKVTGGITNEALARLVIRASSTCRPWMRRHGVHFQPPLSGALHVARTN
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEECC
AFFMGGGKALVNAYYRSAENLGVEIRYETPVDAIELDGSRFVAARSGAQRFQARTCVLAA
EEEECCCHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCEEEEECCHHHHHHHEEEEEEE
GGFESNREWLREAWGRNERGEWPADNFLIRGTRFNMGVLLKHMIEAGADAIGDPSQSHCV
CCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEE
AIDARAPPYDGGICTRIDCVSLGVVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIA
EEECCCCCCCCCCEEEEEHEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEE
YSIIDAKAIGRFMPPVFPGTVADTLPELARKLGLPEQAFVKSVADYNAGCRPGTFDHTTL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCH
DDCRTEGLTPPKTHWARPIDTAPFYGYALRPGITFTYLGLKVDEHAAVHFGGEPSDNLFV
HHHHHCCCCCCHHHCCCCCCCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEE
AGEMMAGNVLGKGYTAGVGMSIGTAFGRIAGTRAARAAAQAKGVQHEAA
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10455032; 10581549 [H]