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The map label for this gene is tse [H]

Identifier: 73538912

GI number: 73538912

Start: 1828556

End: 1830436

Strand: Reverse

Name: tse [H]

Synonym: Reut_B5087

Alternate gene names: 73538912

Gene position: 1830436-1828556 (Counterclockwise)

Preceding gene: 73538921

Following gene: 73538911

Centisome position: 67.14

GC content: 68.53

Gene sequence:

>1881_bases
ATGGCCTGGTTGCGAAACCTTGGCATAGGGACCCGCCTGTCCCTGGCCTTTATGCTGGTGGTGCTGTTGCTGATTGGCGT
CGCGGTATTTGGCGTGACGTCGCTGGCTGGGATGAACGCATCCTTGCACCTGACCGTGGAGGGTCGCCTGCTCAAGGTGA
TCGACCTTGGCCATGTCAAGCAAGACGCGCTCGAGATCGGCGTGATCGTGCGTGACGCGGCCCTGACCGAAGATCCCGCG
CTGGTCCAGCAAAATACGCAGCGCATCGACGGCATGCGCAAGGAGATGGGCGCGACGCTCGATGCGCTGGGCAAGCTGAT
CGCGGCTTCCGGCCGTCCCGACCTGCAGAAGACCTTTTCCGATCTGACGTCGGCGCGCGAGGCCTACAACGGCCAGCTCG
ACATGGTGCTGCGCCAGCTCGGCGCGGGCGAGTTCGCCGGCGCGCGGGCGGCCCTTGTGGTGACGTTGCCCGCCGCGCAG
CGCCCGTACTTCGAAAAGCTCGATGAGATCATGGACGGCGGCCGCAACCTTGCGCTGGCCGCGGTCAAGCAAGCCGATGC
GGGGTTTGTCTGGACCCGTAATGTGCTGCTCGGCCTGACCGCGCTGGCCGTGCTGCTCGCGGTGCTGATGGGCACCGCCA
TCACGCGGTCGATCACCGGTCCCGCGCGCCAGGCACTGGAAGCCGCCGAGGCGCTGGCCACGGGCAATCTGCGCCACACG
TTCAACGTGCGCAGCAGCGATGAAATGGGCCGCATGCTGGCGGCGCTCGAACGCGCGTTCCGCCACCTGGCGGCACTCGT
GCATGGCATCCAGCAGGCATCGGGCTCGATCGACGGCGCCACGCGCGAGATCGCCCGCGGCAATACCGATCTGTCGCAGC
GCACGGAACAGCAGGCTGCGTCGCTGGAGCAAACCGCAGCATCGATGGAGCAGCTCACGTCGACGGTGCGCCAGAACGCC
GACAACGCGCGGCAGGCCAACCAGCTCGCGGTCAACGCGTCGGATGTGGCCACGGAAGGCGGCCGCGTCGTGCGCGATGT
GGTCCAGACCATGGACAGCATCTCCAAGTCGTCGTCGCAGGTGGCGGATATCACCGGCGTGATCGAGAGCATTGCGTTCC
AGACCAATATCCTTGCGCTCAACGCTGCGGTCGAGGCGGCGCGCGCGGGCGAGCAGGGGCGCGGCTTTGCGGTGGTGGCG
TCAGAGGTGCGCAATCTCGCGCAGCGCTCGTCCGCTGCCGCCAAGGAAATTGCCGAGCTGATCGGCGGCTCGGTGCGGCA
GGTGCAGGACGGTGCGCGTCAGGCCGAACAGGCGGGCAAGACCATGGACGACATCGTTGGGGCGGTGCGTCGGGTGACGG
ACATCATGGGCGAGATCTCGGCGGCCAGCACGGAGCAGACTTCCGGCATCGAGCAGGTCAGCCTGGCGGTGACGCAGATG
GAAAGCATGACGCAGCAGAACGCCGCGCTGGTCGAACAGGCCGCCGCTGCGGCGGAGAGCCTCATGCAGCAGGCCGGGGG
CCTGGTGAACGAAGTGGGCCGGTTCGACGTCGCACAGGGATCCCCGGCGACGCTCGCGCTGGATGCAGTCGTGCCGCCGC
GCCAAATCGACCCCGCGCCGCTGCCGCCGATGGCGAACCCTGCAGCCCTGGCCGCCCCGCGTGCCCGTGCCGCAGCCGTG
CCTGCGGCCACGCGTCCGCCGGTGCAGCGCAAGCCACAATCGCAGGCTGTACTGGCCAAGCGCGCGCCGGCCGTGCCCGC
AAAGGAGCGTCCGCCGGTCGGCCGACAGCGTCAGGAACCGGTGCTCAAGACCGCCCTGCGACGCCCCACCGGTGCCACAC
AGACGGCCATGGCCGACAGCGGCGACTGGGAAACCTTCTGA

Upstream 100 bases:

>100_bases
TAGGCAGCCGTGCGCCGGTTGTCAGCAGTCACGTCCAGTGACGGCTCTCACGCGCGCGCATGACAAAAATATCAATCACG
GAGTGTTTGGAGGGAGTGAG

Downstream 100 bases:

>100_bases
TCCGACCGTAGCAGTCCCTTCACCATTGCGCCAGCGCCCTCCACGAGAGCGCCGGCGCGAATGTCTCAAAGCGCCTACAA
TGGCGGCTCTTCCTGATCCT

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MAWLRNLGIGTRLSLAFMLVVLLLIGVAVFGVTSLAGMNASLHLTVEGRLLKVIDLGHVKQDALEIGVIVRDAALTEDPA
LVQQNTQRIDGMRKEMGATLDALGKLIAASGRPDLQKTFSDLTSAREAYNGQLDMVLRQLGAGEFAGARAALVVTLPAAQ
RPYFEKLDEIMDGGRNLALAAVKQADAGFVWTRNVLLGLTALAVLLAVLMGTAITRSITGPARQALEAAEALATGNLRHT
FNVRSSDEMGRMLAALERAFRHLAALVHGIQQASGSIDGATREIARGNTDLSQRTEQQAASLEQTAASMEQLTSTVRQNA
DNARQANQLAVNASDVATEGGRVVRDVVQTMDSISKSSSQVADITGVIESIAFQTNILALNAAVEAARAGEQGRGFAVVA
SEVRNLAQRSSAAAKEIAELIGGSVRQVQDGARQAEQAGKTMDDIVGAVRRVTDIMGEISAASTEQTSGIEQVSLAVTQM
ESMTQQNAALVEQAAAAAESLMQQAGGLVNEVGRFDVAQGSPATLALDAVVPPRQIDPAPLPPMANPAALAAPRARAAAV
PAATRPPVQRKPQSQAVLAKRAPAVPAKERPPVGRQRQEPVLKTALRRPTGATQTAMADSGDWETF

Sequences:

>Translated_626_residues
MAWLRNLGIGTRLSLAFMLVVLLLIGVAVFGVTSLAGMNASLHLTVEGRLLKVIDLGHVKQDALEIGVIVRDAALTEDPA
LVQQNTQRIDGMRKEMGATLDALGKLIAASGRPDLQKTFSDLTSAREAYNGQLDMVLRQLGAGEFAGARAALVVTLPAAQ
RPYFEKLDEIMDGGRNLALAAVKQADAGFVWTRNVLLGLTALAVLLAVLMGTAITRSITGPARQALEAAEALATGNLRHT
FNVRSSDEMGRMLAALERAFRHLAALVHGIQQASGSIDGATREIARGNTDLSQRTEQQAASLEQTAASMEQLTSTVRQNA
DNARQANQLAVNASDVATEGGRVVRDVVQTMDSISKSSSQVADITGVIESIAFQTNILALNAAVEAARAGEQGRGFAVVA
SEVRNLAQRSSAAAKEIAELIGGSVRQVQDGARQAEQAGKTMDDIVGAVRRVTDIMGEISAASTEQTSGIEQVSLAVTQM
ESMTQQNAALVEQAAAAAESLMQQAGGLVNEVGRFDVAQGSPATLALDAVVPPRQIDPAPLPPMANPAALAAPRARAAAV
PAATRPPVQRKPQSQAVLAKRAPAVPAKERPPVGRQRQEPVLKTALRRPTGATQTAMADSGDWETF
>Mature_625_residues
AWLRNLGIGTRLSLAFMLVVLLLIGVAVFGVTSLAGMNASLHLTVEGRLLKVIDLGHVKQDALEIGVIVRDAALTEDPAL
VQQNTQRIDGMRKEMGATLDALGKLIAASGRPDLQKTFSDLTSAREAYNGQLDMVLRQLGAGEFAGARAALVVTLPAAQR
PYFEKLDEIMDGGRNLALAAVKQADAGFVWTRNVLLGLTALAVLLAVLMGTAITRSITGPARQALEAAEALATGNLRHTF
NVRSSDEMGRMLAALERAFRHLAALVHGIQQASGSIDGATREIARGNTDLSQRTEQQAASLEQTAASMEQLTSTVRQNAD
NARQANQLAVNASDVATEGGRVVRDVVQTMDSISKSSSQVADITGVIESIAFQTNILALNAAVEAARAGEQGRGFAVVAS
EVRNLAQRSSAAAKEIAELIGGSVRQVQDGARQAEQAGKTMDDIVGAVRRVTDIMGEISAASTEQTSGIEQVSLAVTQME
SMTQQNAALVEQAAAAAESLMQQAGGLVNEVGRFDVAQGSPATLALDAVVPPRQIDPAPLPPMANPAALAAPRARAAAVP
AATRPPVQRKPQSQAVLAKRAPAVPAKERPPVGRQRQEPVLKTALRRPTGATQTAMADSGDWETF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=334, Percent_Identity=55.3892215568862, Blast_Score=298, Evalue=8e-82,
Organism=Escherichia coli, GI2367378, Length=373, Percent_Identity=51.7426273458445, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1787690, Length=326, Percent_Identity=51.840490797546, Blast_Score=284, Evalue=1e-77,
Organism=Escherichia coli, GI1788194, Length=286, Percent_Identity=56.2937062937063, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1789453, Length=315, Percent_Identity=40.9523809523809, Blast_Score=220, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 65736; Mature: 65605

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWLRNLGIGTRLSLAFMLVVLLLIGVAVFGVTSLAGMNASLHLTVEGRLLKVIDLGHVK
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEHHHCCHH
QDALEIGVIVRDAALTEDPALVQQNTQRIDGMRKEMGATLDALGKLIAASGRPDLQKTFS
HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHH
DLTSAREAYNGQLDMVLRQLGAGEFAGARAALVVTLPAAQRPYFEKLDEIMDGGRNLALA
HHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEHH
AVKQADAGFVWTRNVLLGLTALAVLLAVLMGTAITRSITGPARQALEAAEALATGNLRHT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
FNVRSSDEMGRMLAALERAFRHLAALVHGIQQASGSIDGATREIARGNTDLSQRTEQQAA
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHH
SLEQTAASMEQLTSTVRQNADNARQANQLAVNASDVATEGGRVVRDVVQTMDSISKSSSQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VADITGVIESIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSSAAAKEIAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IGGSVRQVQDGARQAEQAGKTMDDIVGAVRRVTDIMGEISAASTEQTSGIEQVSLAVTQM
HCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHH
ESMTQQNAALVEQAAAAAESLMQQAGGLVNEVGRFDVAQGSPATLALDAVVPPRQIDPAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCC
LPPMANPAALAAPRARAAAVPAATRPPVQRKPQSQAVLAKRAPAVPAKERPPVGRQRQEP
CCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCH
VLKTALRRPTGATQTAMADSGDWETF
HHHHHHCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
AWLRNLGIGTRLSLAFMLVVLLLIGVAVFGVTSLAGMNASLHLTVEGRLLKVIDLGHVK
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEHHHCCHH
QDALEIGVIVRDAALTEDPALVQQNTQRIDGMRKEMGATLDALGKLIAASGRPDLQKTFS
HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHH
DLTSAREAYNGQLDMVLRQLGAGEFAGARAALVVTLPAAQRPYFEKLDEIMDGGRNLALA
HHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEHH
AVKQADAGFVWTRNVLLGLTALAVLLAVLMGTAITRSITGPARQALEAAEALATGNLRHT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
FNVRSSDEMGRMLAALERAFRHLAALVHGIQQASGSIDGATREIARGNTDLSQRTEQQAA
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHH
SLEQTAASMEQLTSTVRQNADNARQANQLAVNASDVATEGGRVVRDVVQTMDSISKSSSQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VADITGVIESIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSSAAAKEIAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IGGSVRQVQDGARQAEQAGKTMDDIVGAVRRVTDIMGEISAASTEQTSGIEQVSLAVTQM
HCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHH
ESMTQQNAALVEQAAAAAESLMQQAGGLVNEVGRFDVAQGSPATLALDAVVPPRQIDPAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCC
LPPMANPAALAAPRARAAAVPAATRPPVQRKPQSQAVLAKRAPAVPAKERPPVGRQRQEP
CCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCH
VLKTALRRPTGATQTAMADSGDWETF
HHHHHHCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]