| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is yebQ [C]
Identifier: 73538911
GI number: 73538911
Start: 1826792
End: 1828381
Strand: Reverse
Name: yebQ [C]
Synonym: Reut_B5086
Alternate gene names: 73538911
Gene position: 1828381-1826792 (Counterclockwise)
Preceding gene: 73538912
Following gene: 73538909
Centisome position: 67.07
GC content: 68.81
Gene sequence:
>1590_bases ATGACCGCCGTTCCTTCCCAGTCGCCGCACGCGGCCGATACTTCGCCTTCCTCGTCCTCCCCAACCGTCCCGACCGCCCC GACCGCCACCAGCGAACCGCCGGTCATGCAGATCCTGTTCGGGCTGATGCTGGCCATCCTGCTCGGCGCGCTGGAACAGT CGATCGTCGCGGTAGTGCTGCCCGAGATCGCGCTGCAGCTGCGCGGCTTCGAGGACATGGCCTGGGTGATCTCGGCCTAC CTCGTCGCCTCGACCGTGGCCACGCCGATCTACGGCAAGCTCTCCGACGTGCTGGGCCGGCGCTCGGTACTGTCGTTTTC CATCCTGCTGTTCCTGGTCGCCTCGGCGGTGTGTGCGCTGGCCCAAACCATGCCGCAGCTGATCCTCGCGCGAATCCTGC AAGGCCTGGGCGGAGGCGGACTGATCTCGGTGTCGCAGGCGGCCATTGCCGACGTGGTGCCGCTGCGGGACCGCGGCCGC TACCAGGGTTACGTGAGCGGCGTGTGGGCGGTGGCCAGCATGGCCGGGCCGGTGATCGGCGGGTACCTCGCGCATTACCT GTCCTGGCGCTGGATTTTCTGGATCAATCTGCCGCTGGCCCTGCTGGCGCTGGTCGTGGTGCGCCGTGCACTGCGCTTCC TGCCGGTCAGCGGCCGGCGCCATCGCATTGACTATCTCGGCGCGCTGCTGTTCGGCGGCGGCCTCAGCGGCGTGCTGGTG TTCCTGACGCGGCTGGGGCAGGGGCATTCCCCGCTGCGGACGGATTCGCTGGCGCTGCTGATCGCCGGCCTTGTCGCCAT CGCGCTGTTCGTCTGGCAAGAAAAGCGTGCGGCGGATCCCGTGATTCCGCTGGCCATGCTGGGCGTGCCGACCGTGGCGA TCTGCTGTGCCACGCTGTTCTTCTGCTTCTTCCAGCTCATCGCCATGTCGGTGTTGCTGCCGCTGCGTTTCCAGGTAGTG GGCGGAGCCGCGGCCGATGCCGCTGCGCTGCGGCTGGTGCCGCTTACGCTAGCGATTCCGTTCGGCGCCTACGCGTCGGG GCGCATCATGTCGCGCACTGGCCGCTACAAGCCGCTGCAGATGGCGGGCGCCTCCGTGGCGCCTCTGGCGATTGTCGCAC TCGCCTTTGTCGATCCGGCCGCGGTCTGGCTGTGCGTGCTGGTAATGGTGATTCTTGGCTTTTCGATCGGCTTGCAGCTG CCGAGCGGCCTGGTCGCCACGCAAAATGCCGTGCCGCCTCAGCAGGTGGGCATTGCGACGGCACTGACGGCGTTTTCGCG CATGCTCGGTGGCGCCGTCGGCGTGGCGGTGCTGACCACTGTGCTGATTGCGCTGCTGCGCCATAGCGGGATGGCCGTGA CCGACCTGGCCGGCGGCGAGGACGTGCTGATGAGCATGTTCCGCCGCGCGCTGGCCCCTGACACCCCGGCCGCCGACGCC GCTGCCGTACGACAGGCCGCCGAGTACGCCTTCCGCCTGCTGTTCCTGATGAGCGCGGCGGTGTCGTTGCTGGCACCGTT CCTGGTCATGCGCCTGCGGGAAGCCACCTTGCGAGGCAGCCCCGCGGCTGCCTCGGCGGCGGCCGAGTAG
Upstream 100 bases:
>100_bases CTACAATGGCGGCTCTTCCTGATCCTCGTAGCAAGGGCAGGCCGGTCCACCTGGCGCATGCGGCGCCTTACGGCCGCCAT GCCTGCCGCCGCTGGTGTCG
Downstream 100 bases:
>100_bases CTCTCGGTCTCAGGCGCCGCGCGCCACCCGCCGCCGCGCGCGCGCCGCCAGCCCCGGCCCCAGGGCCCAGCGCAACGTCG GGGCCAGCACCCGCATGCCG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MTAVPSQSPHAADTSPSSSSPTVPTAPTATSEPPVMQILFGLMLAILLGALEQSIVAVVLPEIALQLRGFEDMAWVISAY LVASTVATPIYGKLSDVLGRRSVLSFSILLFLVASAVCALAQTMPQLILARILQGLGGGGLISVSQAAIADVVPLRDRGR YQGYVSGVWAVASMAGPVIGGYLAHYLSWRWIFWINLPLALLALVVVRRALRFLPVSGRRHRIDYLGALLFGGGLSGVLV FLTRLGQGHSPLRTDSLALLIAGLVAIALFVWQEKRAADPVIPLAMLGVPTVAICCATLFFCFFQLIAMSVLLPLRFQVV GGAAADAAALRLVPLTLAIPFGAYASGRIMSRTGRYKPLQMAGASVAPLAIVALAFVDPAAVWLCVLVMVILGFSIGLQL PSGLVATQNAVPPQQVGIATALTAFSRMLGGAVGVAVLTTVLIALLRHSGMAVTDLAGGEDVLMSMFRRALAPDTPAADA AAVRQAAEYAFRLLFLMSAAVSLLAPFLVMRLREATLRGSPAAASAAAE
Sequences:
>Translated_529_residues MTAVPSQSPHAADTSPSSSSPTVPTAPTATSEPPVMQILFGLMLAILLGALEQSIVAVVLPEIALQLRGFEDMAWVISAY LVASTVATPIYGKLSDVLGRRSVLSFSILLFLVASAVCALAQTMPQLILARILQGLGGGGLISVSQAAIADVVPLRDRGR YQGYVSGVWAVASMAGPVIGGYLAHYLSWRWIFWINLPLALLALVVVRRALRFLPVSGRRHRIDYLGALLFGGGLSGVLV FLTRLGQGHSPLRTDSLALLIAGLVAIALFVWQEKRAADPVIPLAMLGVPTVAICCATLFFCFFQLIAMSVLLPLRFQVV GGAAADAAALRLVPLTLAIPFGAYASGRIMSRTGRYKPLQMAGASVAPLAIVALAFVDPAAVWLCVLVMVILGFSIGLQL PSGLVATQNAVPPQQVGIATALTAFSRMLGGAVGVAVLTTVLIALLRHSGMAVTDLAGGEDVLMSMFRRALAPDTPAADA AAVRQAAEYAFRLLFLMSAAVSLLAPFLVMRLREATLRGSPAAASAAAE >Mature_528_residues TAVPSQSPHAADTSPSSSSPTVPTAPTATSEPPVMQILFGLMLAILLGALEQSIVAVVLPEIALQLRGFEDMAWVISAYL VASTVATPIYGKLSDVLGRRSVLSFSILLFLVASAVCALAQTMPQLILARILQGLGGGGLISVSQAAIADVVPLRDRGRY QGYVSGVWAVASMAGPVIGGYLAHYLSWRWIFWINLPLALLALVVVRRALRFLPVSGRRHRIDYLGALLFGGGLSGVLVF LTRLGQGHSPLRTDSLALLIAGLVAIALFVWQEKRAADPVIPLAMLGVPTVAICCATLFFCFFQLIAMSVLLPLRFQVVG GAAADAAALRLVPLTLAIPFGAYASGRIMSRTGRYKPLQMAGASVAPLAIVALAFVDPAAVWLCVLVMVILGFSIGLQLP SGLVATQNAVPPQQVGIATALTAFSRMLGGAVGVAVLTTVLIALLRHSGMAVTDLAGGEDVLMSMFRRALAPDTPAADAA AVRQAAEYAFRLLFLMSAAVSLLAPFLVMRLREATLRGSPAAASAAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=423, Percent_Identity=30.7328605200946, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1790195, Length=405, Percent_Identity=26.1728395061728, Blast_Score=122, Evalue=8e-29, Organism=Escherichia coli, GI1789042, Length=406, Percent_Identity=25.8620689655172, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1788710, Length=442, Percent_Identity=25.3393665158371, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1788392, Length=401, Percent_Identity=26.1845386533666, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1788509, Length=118, Percent_Identity=33.8983050847458, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1790146, Length=170, Percent_Identity=27.6470588235294, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI87082159, Length=107, Percent_Identity=37.3831775700935, Blast_Score=63, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323735, Length=335, Percent_Identity=27.1641791044776, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6322958, Length=458, Percent_Identity=23.1441048034935, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6319770, Length=407, Percent_Identity=27.5184275184275, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6325455, Length=168, Percent_Identity=30.3571428571429, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321663, Length=149, Percent_Identity=31.5436241610738, Blast_Score=95, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6319783, Length=379, Percent_Identity=23.7467018469657, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6322071, Length=192, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322070, Length=104, Percent_Identity=37.5, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324264, Length=195, Percent_Identity=28.7179487179487, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001958 - InterPro: IPR011991 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 55282; Mature: 55150
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVPSQSPHAADTSPSSSSPTVPTAPTATSEPPVMQILFGLMLAILLGALEQSIVAVVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH PEIALQLRGFEDMAWVISAYLVASTVATPIYGKLSDVLGRRSVLSFSILLFLVASAVCAL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQTMPQLILARILQGLGGGGLISVSQAAIADVVPLRDRGRYQGYVSGVWAVASMAGPVIG HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH GYLAHYLSWRWIFWINLPLALLALVVVRRALRFLPVSGRRHRIDYLGALLFGGGLSGVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH FLTRLGQGHSPLRTDSLALLIAGLVAIALFVWQEKRAADPVIPLAMLGVPTVAICCATLF HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FCFFQLIAMSVLLPLRFQVVGGAAADAAALRLVPLTLAIPFGAYASGRIMSRTGRYKPLQ HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCHH MAGASVAPLAIVALAFVDPAAVWLCVLVMVILGFSIGLQLPSGLVATQNAVPPQQVGIAT HCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH ALTAFSRMLGGAVGVAVLTTVLIALLRHSGMAVTDLAGGEDVLMSMFRRALAPDTPAADA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHH AAVRQAAEYAFRLLFLMSAAVSLLAPFLVMRLREATLRGSPAAASAAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure TAVPSQSPHAADTSPSSSSPTVPTAPTATSEPPVMQILFGLMLAILLGALEQSIVAVVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH PEIALQLRGFEDMAWVISAYLVASTVATPIYGKLSDVLGRRSVLSFSILLFLVASAVCAL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQTMPQLILARILQGLGGGGLISVSQAAIADVVPLRDRGRYQGYVSGVWAVASMAGPVIG HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH GYLAHYLSWRWIFWINLPLALLALVVVRRALRFLPVSGRRHRIDYLGALLFGGGLSGVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH FLTRLGQGHSPLRTDSLALLIAGLVAIALFVWQEKRAADPVIPLAMLGVPTVAICCATLF HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FCFFQLIAMSVLLPLRFQVVGGAAADAAALRLVPLTLAIPFGAYASGRIMSRTGRYKPLQ HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCHH MAGASVAPLAIVALAFVDPAAVWLCVLVMVILGFSIGLQLPSGLVATQNAVPPQQVGIAT HCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH ALTAFSRMLGGAVGVAVLTTVLIALLRHSGMAVTDLAGGEDVLMSMFRRALAPDTPAADA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHH AAVRQAAEYAFRLLFLMSAAVSLLAPFLVMRLREATLRGSPAAASAAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]