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The map label for this gene is yvoA [H]

Identifier: 73538665

GI number: 73538665

Start: 1548216

End: 1549028

Strand: Reverse

Name: yvoA [H]

Synonym: Reut_B4840

Alternate gene names: 73538665

Gene position: 1549028-1548216 (Counterclockwise)

Preceding gene: 73538666

Following gene: 73538664

Centisome position: 56.82

GC content: 68.27

Gene sequence:

>813_bases
ATGCCTTTGGATGCCAACCCCGATCTTCCCCGCTTTCAGCAAGTCCGGCTGATCCTGCGCGACCGTATCCGCGGCGGCTA
CTACGAGACCGGCATGCCGCTACCCGGCGAGCGCCAGCTAGCCGAAGAATTCGGCGTGGCGCGTGTCACCGTACGCTCGG
CGCTGGCGCGGCTGGAAGAGGAGGGAATGGTTGCGCGTCTGCGCGGCAAGGGCACCGTGCCGACCTTCCGGCATGCGGCA
ACCGCCGCCACGGCGGTGCGCGGCGGATTGCTCGACAACATCGTCAGCGTCAGCAAGCGCACGCGCGTCACGGTCCTGGA
ATGGAAGCGCATGCCGGCCCCGCCGGCAGTCAGCACGGCGCTGGACCTGCCGCCTGGCGCCGCGGTGCTCAAGGTGGTGC
GCGTGCGCAAGTTCAAGGCGCAGCCGATCGCCTATACCGAAGTCTTTGTGCCCGACGACCTGGCCGGCGCGCTCGACCGG
CATACGTTGCAGGACACGCCGATGCTGGTTGCGCTGGAGCAGCACGGCGTGCATGTCGTTTCCGCCGACCAGACGCTGGG
AGCCGCCGTGGCGGATCTCCAGGTTGCCCGCATCCTGCGGCTGAGTCCCGGGGTGCCGCTGCTACGCGTTTCGCGCATCG
CCACGGATCGGCAAGGCCGGCGTGTGCAATACCTGGTGGGCTTGTATCACCCGGAGCGCTACACCTACCAGATGCGCCTG
TCGCGCGTGGGCGGCGCTACGCGGGTCTGGATCGATGCCGATTCGTCGGAGGGTGACGCGGCAGGCAGCACGACGATTTC
GCCGCTGGAGTAA

Upstream 100 bases:

>100_bases
GCGCTGGGCAAGCGCTACGAATAGGGCAGCATCGCTTGTTCAACTAGCGCGACGCGCGTACCGTGGCGGCAATGCCCGTA
CGCTTGTCAGCCTATTGCCC

Downstream 100 bases:

>100_bases
GTGAGGGTGAGTAGTCAAGGCATTGAGCGAGCCTGGGCGATGATCGACACCCTGACTGTAGCCTTGCCGACGTGCCTTAC
CCTTCTGTGGGGAGGGCGCA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MPLDANPDLPRFQQVRLILRDRIRGGYYETGMPLPGERQLAEEFGVARVTVRSALARLEEEGMVARLRGKGTVPTFRHAA
TAATAVRGGLLDNIVSVSKRTRVTVLEWKRMPAPPAVSTALDLPPGAAVLKVVRVRKFKAQPIAYTEVFVPDDLAGALDR
HTLQDTPMLVALEQHGVHVVSADQTLGAAVADLQVARILRLSPGVPLLRVSRIATDRQGRRVQYLVGLYHPERYTYQMRL
SRVGGATRVWIDADSSEGDAAGSTTISPLE

Sequences:

>Translated_270_residues
MPLDANPDLPRFQQVRLILRDRIRGGYYETGMPLPGERQLAEEFGVARVTVRSALARLEEEGMVARLRGKGTVPTFRHAA
TAATAVRGGLLDNIVSVSKRTRVTVLEWKRMPAPPAVSTALDLPPGAAVLKVVRVRKFKAQPIAYTEVFVPDDLAGALDR
HTLQDTPMLVALEQHGVHVVSADQTLGAAVADLQVARILRLSPGVPLLRVSRIATDRQGRRVQYLVGLYHPERYTYQMRL
SRVGGATRVWIDADSSEGDAAGSTTISPLE
>Mature_269_residues
PLDANPDLPRFQQVRLILRDRIRGGYYETGMPLPGERQLAEEFGVARVTVRSALARLEEEGMVARLRGKGTVPTFRHAAT
AATAVRGGLLDNIVSVSKRTRVTVLEWKRMPAPPAVSTALDLPPGAAVLKVVRVRKFKAQPIAYTEVFVPDDLAGALDRH
TLQDTPMLVALEQHGVHVVSADQTLGAAVADLQVARILRLSPGVPLLRVSRIATDRQGRRVQYLVGLYHPERYTYQMRLS
RVGGATRVWIDADSSEGDAAGSTTISPLE

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790118, Length=225, Percent_Identity=28, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87082252, Length=210, Percent_Identity=29.0476190476191, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788418, Length=234, Percent_Identity=24.7863247863248, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786950, Length=234, Percent_Identity=27.3504273504274, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 29528; Mature: 29396

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLDANPDLPRFQQVRLILRDRIRGGYYETGMPLPGERQLAEEFGVARVTVRSALARLEE
CCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
EGMVARLRGKGTVPTFRHAATAATAVRGGLLDNIVSVSKRTRVTVLEWKRMPAPPAVSTA
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHH
LDLPPGAAVLKVVRVRKFKAQPIAYTEVFVPDDLAGALDRHTLQDTPMLVALEQHGVHVV
CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCEEEE
SADQTLGAAVADLQVARILRLSPGVPLLRVSRIATDRQGRRVQYLVGLYHPERYTYQMRL
ECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEHH
SRVGGATRVWIDADSSEGDAAGSTTISPLE
HHCCCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLDANPDLPRFQQVRLILRDRIRGGYYETGMPLPGERQLAEEFGVARVTVRSALARLEE
CCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
EGMVARLRGKGTVPTFRHAATAATAVRGGLLDNIVSVSKRTRVTVLEWKRMPAPPAVSTA
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHH
LDLPPGAAVLKVVRVRKFKAQPIAYTEVFVPDDLAGALDRHTLQDTPMLVALEQHGVHVV
CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCEEEE
SADQTLGAAVADLQVARILRLSPGVPLLRVSRIATDRQGRRVQYLVGLYHPERYTYQMRL
ECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEHH
SRVGGATRVWIDADSSEGDAAGSTTISPLE
HHCCCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]