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The map label for this gene is bphR [H]

Identifier: 73538506

GI number: 73538506

Start: 1376539

End: 1377321

Strand: Direct

Name: bphR [H]

Synonym: Reut_B4680

Alternate gene names: 73538506

Gene position: 1376539-1377321 (Clockwise)

Preceding gene: 73538505

Following gene: 73538509

Centisome position: 50.49

GC content: 67.05

Gene sequence:

>783_bases
GTGCCAGCCAAACCCGCCAAGCCCGTCACCATTGATACTGCCGTCCAGGAGTCGCCGGACCTCGGCGGGCGCACGTGGGC
ATCCGTCCTCGAACAGGCGGTTCGCGAAGACATCATCAGCGGGCGTCTGCCGGCGGGCAGCAAACTGCGCCTGAAGGAAC
TGGCCGAGCATTACCAGGCCGGTGTGATCCCACTGCGCGAGGCCCTGTCCCGGTTGTGCACGACCGGCTTTGTACTGGCA
ATCGACCAGAAGGGCTTCCGGGTGGCGGAGCTGTCCCCCGAGGAATTGCTCGACGTCACGCGCGTGCGCCAGCAGATAGA
ATGCCAGGCTCTGCGCGACGCCATCAGGCTCGCGGACATCGCTTGGGAAAGCGATGTGGTAGCGGCGCACCATCGCCTGA
CGCGCATCCCGATGGTGTTGCGCGACCAACGCGGCGCGCTGAACCCAGAGTGGGAAGCCGCACATGTGGCTTTTCACGAT
GCGCTGATCTGGGGCTGCCACTCCCCATGGCTGCGGCGGTTCTCGGCCGTACTGCGCGACCAGACGGCGCGCTATCGGTT
CCTCTCGCTCGCCGTACCCAAGGCCGAACGGAGCCGGGACGTGGCGGCGGAACACGAGGCCATCGTCAGCGCCGTGGTCG
CACGCAACGCTGACCGCGCCTGCAAACTGCTGTCGGACCATTTCCAGCACACCACCGACCTGGTGCTCCAGTACCTTGCC
CGGCAGAAAGGCGGCGCCGCGCCGACGCGCAAACGCAGGGCAGCGGCCGAAGCCCCTGTCTGA

Upstream 100 bases:

>100_bases
CCGTCAGGCGGCATAACCGGGCGGGCGCCGCGGCCCGGCGTCTGGGTCTCGTGAAAATATATAATGATGCAAACCATCTA
TCATTTCCACCGAGCGCCCT

Downstream 100 bases:

>100_bases
CCTGACAGGCGAAATGGGAATGACCACGGAGATAACACGGACTCACTCCCGTGGGGGAGCCGGCCCCATCGTTTCGGGGA
ACGGATGCGCCGGGCTCCGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MPAKPAKPVTIDTAVQESPDLGGRTWASVLEQAVREDIISGRLPAGSKLRLKELAEHYQAGVIPLREALSRLCTTGFVLA
IDQKGFRVAELSPEELLDVTRVRQQIECQALRDAIRLADIAWESDVVAAHHRLTRIPMVLRDQRGALNPEWEAAHVAFHD
ALIWGCHSPWLRRFSAVLRDQTARYRFLSLAVPKAERSRDVAAEHEAIVSAVVARNADRACKLLSDHFQHTTDLVLQYLA
RQKGGAAPTRKRRAAAEAPV

Sequences:

>Translated_260_residues
MPAKPAKPVTIDTAVQESPDLGGRTWASVLEQAVREDIISGRLPAGSKLRLKELAEHYQAGVIPLREALSRLCTTGFVLA
IDQKGFRVAELSPEELLDVTRVRQQIECQALRDAIRLADIAWESDVVAAHHRLTRIPMVLRDQRGALNPEWEAAHVAFHD
ALIWGCHSPWLRRFSAVLRDQTARYRFLSLAVPKAERSRDVAAEHEAIVSAVVARNADRACKLLSDHFQHTTDLVLQYLA
RQKGGAAPTRKRRAAAEAPV
>Mature_259_residues
PAKPAKPVTIDTAVQESPDLGGRTWASVLEQAVREDIISGRLPAGSKLRLKELAEHYQAGVIPLREALSRLCTTGFVLAI
DQKGFRVAELSPEELLDVTRVRQQIECQALRDAIRLADIAWESDVVAAHHRLTRIPMVLRDQRGALNPEWEAAHVAFHDA
LIWGCHSPWLRRFSAVLRDQTARYRFLSLAVPKAERSRDVAAEHEAIVSAVVARNADRACKLLSDHFQHTTDLVLQYLAR
QKGGAAPTRKRRAAAEAPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082149, Length=209, Percent_Identity=36.3636363636364, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28917; Mature: 28786

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKPAKPVTIDTAVQESPDLGGRTWASVLEQAVREDIISGRLPAGSKLRLKELAEHYQA
CCCCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GVIPLREALSRLCTTGFVLAIDQKGFRVAELSPEELLDVTRVRQQIECQALRDAIRLADI
CCHHHHHHHHHHHHCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWESDVVAAHHRLTRIPMVLRDQRGALNPEWEAAHVAFHDALIWGCHSPWLRRFSAVLRD
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QTARYRFLSLAVPKAERSRDVAAEHEAIVSAVVARNADRACKLLSDHFQHTTDLVLQYLA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
RQKGGAAPTRKRRAAAEAPV
HHCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
PAKPAKPVTIDTAVQESPDLGGRTWASVLEQAVREDIISGRLPAGSKLRLKELAEHYQA
CCCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GVIPLREALSRLCTTGFVLAIDQKGFRVAELSPEELLDVTRVRQQIECQALRDAIRLADI
CCHHHHHHHHHHHHCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWESDVVAAHHRLTRIPMVLRDQRGALNPEWEAAHVAFHDALIWGCHSPWLRRFSAVLRD
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QTARYRFLSLAVPKAERSRDVAAEHEAIVSAVVARNADRACKLLSDHFQHTTDLVLQYLA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
RQKGGAAPTRKRRAAAEAPV
HHCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]