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The map label for this gene is ybiX [C]

Identifier: 73538486

GI number: 73538486

Start: 1351965

End: 1352648

Strand: Reverse

Name: ybiX [C]

Synonym: Reut_B4660

Alternate gene names: 73538486

Gene position: 1352648-1351965 (Counterclockwise)

Preceding gene: 73538487

Following gene: 73538482

Centisome position: 49.62

GC content: 64.47

Gene sequence:

>684_bases
ATGATGCTGCAGATTCCGGACGTCCTGTCCAAGGCCCAGGTGGCGCAATGCCGGCAAATGATGGATGTCGCGGACTGGAC
CGATGGCAATGCCACGTCCGGACATCAGTCCGCGCTGGCCAAGCGCAACATGCAACTGCCAGAGGGCTCGCCTGTCGCGC
GGCAAATCGGCGATCTGATCCAGGATGCACTGGGCGCCAACGCGACGTTCTTCTCCGCAGCGCTGCCGCTCAAGGTGTTC
CCGCCGCTGTTCAACCGCTATGAGGGCGGCCAGGCGTTCGACAACCACGTCGACAATGCCATCCGCTACCTGCGCGGCAC
CGGCTTTCGCGTGCGCAGCGATCTTTCCGCGACGCTGTTCCTGACGGAGCCGCAGGACTACGACGGCGGCGAACTCGTGA
TCGAAGACACCTACGGCCAGCACCGCGTCAAACTGCCGGCGGGCTATATGGTGCTGTACCCGGCCACCAGCCTGCACCAC
GTCACGCCCGTCACGCGCGGCGCGCGCGTGTCATCGTTCTTCTGGATCCAGAGCATGGTGCGGGACGAAGGGCAGCGCGC
CTTGCTGTTCGAACTCGACACGCGGATCCAGCAGGTTGCGGAAGAGATGGGGCAAAAGGATTCGGGCGTAGTAGGGTTGA
CCGGCGTCTACCATAACCTGCTGCGCCGCTGGGCCGACGCCTGA

Upstream 100 bases:

>100_bases
CCGCACGTGCTTGGAACAAACTGATAATGATTCCTGTTTGCGTTTGAGGCCGCCTTTACCCTACAATCTTCGATCCCCGA
CCCGAAGGTAGGCACGAGCC

Downstream 100 bases:

>100_bases
CAGCAACGCAAGCGCCAAAGAGCCTGTTAAAACAACAAAAAACCGCGGGCTCCGGCACAAAAAGCCAGAACCCGCGGTTG
CTCGCAACGCTTGAATCCAT

Product: putative hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MMLQIPDVLSKAQVAQCRQMMDVADWTDGNATSGHQSALAKRNMQLPEGSPVARQIGDLIQDALGANATFFSAALPLKVF
PPLFNRYEGGQAFDNHVDNAIRYLRGTGFRVRSDLSATLFLTEPQDYDGGELVIEDTYGQHRVKLPAGYMVLYPATSLHH
VTPVTRGARVSSFFWIQSMVRDEGQRALLFELDTRIQQVAEEMGQKDSGVVGLTGVYHNLLRRWADA

Sequences:

>Translated_227_residues
MMLQIPDVLSKAQVAQCRQMMDVADWTDGNATSGHQSALAKRNMQLPEGSPVARQIGDLIQDALGANATFFSAALPLKVF
PPLFNRYEGGQAFDNHVDNAIRYLRGTGFRVRSDLSATLFLTEPQDYDGGELVIEDTYGQHRVKLPAGYMVLYPATSLHH
VTPVTRGARVSSFFWIQSMVRDEGQRALLFELDTRIQQVAEEMGQKDSGVVGLTGVYHNLLRRWADA
>Mature_227_residues
MMLQIPDVLSKAQVAQCRQMMDVADWTDGNATSGHQSALAKRNMQLPEGSPVARQIGDLIQDALGANATFFSAALPLKVF
PPLFNRYEGGQAFDNHVDNAIRYLRGTGFRVRSDLSATLFLTEPQDYDGGELVIEDTYGQHRVKLPAGYMVLYPATSLHH
VTPVTRGARVSSFFWIQSMVRDEGQRALLFELDTRIQQVAEEMGQKDSGVVGLTGVYHNLLRRWADA

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain

Homologues:

Organism=Escherichia coli, GI87081784, Length=226, Percent_Identity=50.8849557522124, Blast_Score=238, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4660_CUPPJ (Q46S75)

Other databases:

- EMBL:   CP000091
- RefSeq:   YP_298853.1
- ProteinModelPortal:   Q46S75
- GeneID:   3614209
- GenomeReviews:   CP000091_GR
- KEGG:   reu:Reut_B4660
- NMPDR:   fig|264198.3.peg.5331
- HOGENOM:   HBG285605
- OMA:   ADWADGK
- ProtClustDB:   PRK05467
- BioCyc:   REUT264198:REUT_B4660-MONOMER
- HAMAP:   MF_00657
- InterPro:   IPR005123
- InterPro:   IPR006620
- SMART:   SM00702

Pfam domain/function: PF03171 2OG-FeII_Oxy

EC number: 1.14.11.- [C]

Molecular weight: Translated: 25215; Mature: 25215

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS51471 FE2OG_OXY

Important sites: BINDING 169-169

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLQIPDVLSKAQVAQCRQMMDVADWTDGNATSGHQSALAKRNMQLPEGSPVARQIGDLI
CEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
QDALGANATFFSAALPLKVFPPLFNRYEGGQAFDNHVDNAIRYLRGTGFRVRSDLSATLF
HHHHCCCCHHHHHCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEE
LTEPQDYDGGELVIEDTYGQHRVKLPAGYMVLYPATSLHHVTPVTRGARVSSFFWIQSMV
EECCCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHH
RDEGQRALLFELDTRIQQVAEEMGQKDSGVVGLTGVYHNLLRRWADA
HCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMLQIPDVLSKAQVAQCRQMMDVADWTDGNATSGHQSALAKRNMQLPEGSPVARQIGDLI
CEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
QDALGANATFFSAALPLKVFPPLFNRYEGGQAFDNHVDNAIRYLRGTGFRVRSDLSATLF
HHHHCCCCHHHHHCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEE
LTEPQDYDGGELVIEDTYGQHRVKLPAGYMVLYPATSLHHVTPVTRGARVSSFFWIQSMV
EECCCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHH
RDEGQRALLFELDTRIQQVAEEMGQKDSGVVGLTGVYHNLLRRWADA
HCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA