Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is fabG [H]
Identifier: 73538384
GI number: 73538384
Start: 1235668
End: 1236438
Strand: Reverse
Name: fabG [H]
Synonym: Reut_B4557
Alternate gene names: 73538384
Gene position: 1236438-1235668 (Counterclockwise)
Preceding gene: 73538385
Following gene: 73538383
Centisome position: 45.35
GC content: 64.72
Gene sequence:
>771_bases ATGTCCGAAATCATGTCCCTCAAGGGGAAAGTCATTGTCATCACCGGCGCCGCGCAGGGCGTGGGCCGTGCCACGGCCGA ACTGGCGCTGAATCTTGGCGCCAAGGTATGCGTCGTTGACCTGCAGCGTGAACCGCTGGAAGCATTCGCGGCGGCCAATC CCGACCACGTGCAGGCTTACATCGGCAGCGTGTCCGATCCTGACTTCGTCGCCGCTTCCATCGAACACGCCATCTCGCGC TTTGGCAAGCTGGACGGCCTGGTGAACTGCGCGGGCATCGTGCGTGCCGCGATGATCGAAAACATGACACTGCAGACCTG GAACCAGGTCCTTGAATGCCACCTGACCGGCGCGTTCCTGTGGCTGCAAGCCGTGGGCTCGCACCTGGTCGAGCGCGCCA AGTCCGGCGAGCAGGTCAAGGGATCGATCGTCAATATCTCGTCGGAAGCGGGGCGTCGCGGCTCCATCGGCCAGATCAAC TACGCGTCGGCCAAGGCCGGCATGCTGGGCATGACCATGAGCGCGGCGCGCGAGTGGGGCAAGTATGGCGTGCGCACCAA CACCGTCTGCCTGGGCATGGTCGAGACGCCGATGACCGAAACCATCCGCAGCGAACGCTTCCGTGATACCTACCTCGCGC AGATTCCGATGGGCCGCTGGGCGCAGCCCGAAGAAGTGGCGGGTCCGATCGCGTTCCTGTTGTCGGACGCTGCGGGCTAC GTGCTCGGCCAGCACCTCGGCGTGAACGGCGGCTTCCACCTGGCGAGCTGA
Upstream 100 bases:
>100_bases ACCCGCCGCCTCGAAGGCTGGCAGGACTGACGCTACACATTGCAAGCCTTCCCACATCGTCACGCGGGAAGGGAAGCCAC TACGACCAAGGAGACCTTCA
Downstream 100 bases:
>100_bases AGCACTATGTCGTCGCGCAAGCTCTATACCCATGACCAGCTACGGCGCGCGCTGCACCCGCGCAGCATCGCCGTGGTTGG GGCCACCTCCAACGAACGCT
Product: Short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSEIMSLKGKVIVITGAAQGVGRATAELALNLGAKVCVVDLQREPLEAFAAANPDHVQAYIGSVSDPDFVAASIEHAISR FGKLDGLVNCAGIVRAAMIENMTLQTWNQVLECHLTGAFLWLQAVGSHLVERAKSGEQVKGSIVNISSEAGRRGSIGQIN YASAKAGMLGMTMSAAREWGKYGVRTNTVCLGMVETPMTETIRSERFRDTYLAQIPMGRWAQPEEVAGPIAFLLSDAAGY VLGQHLGVNGGFHLAS
Sequences:
>Translated_256_residues MSEIMSLKGKVIVITGAAQGVGRATAELALNLGAKVCVVDLQREPLEAFAAANPDHVQAYIGSVSDPDFVAASIEHAISR FGKLDGLVNCAGIVRAAMIENMTLQTWNQVLECHLTGAFLWLQAVGSHLVERAKSGEQVKGSIVNISSEAGRRGSIGQIN YASAKAGMLGMTMSAAREWGKYGVRTNTVCLGMVETPMTETIRSERFRDTYLAQIPMGRWAQPEEVAGPIAFLLSDAAGY VLGQHLGVNGGFHLAS >Mature_255_residues SEIMSLKGKVIVITGAAQGVGRATAELALNLGAKVCVVDLQREPLEAFAAANPDHVQAYIGSVSDPDFVAASIEHAISRF GKLDGLVNCAGIVRAAMIENMTLQTWNQVLECHLTGAFLWLQAVGSHLVERAKSGEQVKGSIVNISSEAGRRGSIGQINY ASAKAGMLGMTMSAAREWGKYGVRTNTVCLGMVETPMTETIRSERFRDTYLAQIPMGRWAQPEEVAGPIAFLLSDAAGYV LGQHLGVNGGFHLAS
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=34.2307692307692, Blast_Score=147, Evalue=8e-36, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=30.8943089430894, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI4758504, Length=229, Percent_Identity=31.8777292576419, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=31.6602316602317, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=29.9595141700405, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI83715985, Length=229, Percent_Identity=30.5676855895196, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=29.9212598425197, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI31542939, Length=252, Percent_Identity=31.3492063492063, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI4503301, Length=254, Percent_Identity=30.3149606299213, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=30.6034482758621, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI4504505, Length=234, Percent_Identity=30.3418803418803, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=29.2490118577075, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI32483357, Length=259, Percent_Identity=24.7104247104247, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI224922801, Length=181, Percent_Identity=33.7016574585635, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI5031737, Length=253, Percent_Identity=24.1106719367589, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1787335, Length=250, Percent_Identity=35.6, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=30.2788844621514, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1790717, Length=259, Percent_Identity=32.046332046332, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=33.976833976834, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1786812, Length=259, Percent_Identity=31.2741312741313, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=33.8645418326693, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789057, Length=262, Percent_Identity=28.6259541984733, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI87082160, Length=256, Percent_Identity=27.734375, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788459, Length=256, Percent_Identity=28.515625, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787905, Length=259, Percent_Identity=29.7297297297297, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1789378, Length=260, Percent_Identity=27.3076923076923, Blast_Score=68, Evalue=6e-13, Organism=Caenorhabditis elegans, GI25147288, Length=255, Percent_Identity=37.2549019607843, Blast_Score=149, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=36.4372469635627, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=29.4339622641509, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17560676, Length=257, Percent_Identity=29.9610894941634, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17538182, Length=268, Percent_Identity=27.6119402985075, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562904, Length=272, Percent_Identity=30.8823529411765, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=32.3308270676692, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=28.996282527881, Blast_Score=98, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17563726, Length=267, Percent_Identity=29.2134831460674, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17538480, Length=277, Percent_Identity=31.7689530685921, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=31.0756972111554, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=28.5185185185185, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562906, Length=270, Percent_Identity=29.6296296296296, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17531453, Length=271, Percent_Identity=29.8892988929889, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17561402, Length=261, Percent_Identity=26.4367816091954, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=28.9473684210526, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=30.3030303030303, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17568967, Length=244, Percent_Identity=28.6885245901639, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=29.6296296296296, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=30.6513409961686, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17536651, Length=261, Percent_Identity=27.9693486590038, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17551412, Length=266, Percent_Identity=31.203007518797, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=26.6666666666667, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193204405, Length=268, Percent_Identity=27.6119402985075, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538486, Length=267, Percent_Identity=32.2097378277154, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17536025, Length=261, Percent_Identity=28.735632183908, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17560220, Length=270, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=26.5625, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17561272, Length=262, Percent_Identity=27.0992366412214, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17508895, Length=201, Percent_Identity=28.3582089552239, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=28.1954887218045, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17564282, Length=209, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193203117, Length=208, Percent_Identity=27.4038461538462, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=217, Percent_Identity=31.3364055299539, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6324126, Length=260, Percent_Identity=29.2307692307692, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322226, Length=198, Percent_Identity=25.2525252525253, Blast_Score=62, Evalue=9e-11, Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=34.9397590361446, Blast_Score=141, Evalue=5e-34, Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=32.421875, Blast_Score=111, Evalue=6e-25, Organism=Drosophila melanogaster, GI24643142, Length=251, Percent_Identity=31.0756972111554, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI21357041, Length=260, Percent_Identity=33.0769230769231, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI17737361, Length=229, Percent_Identity=32.7510917030568, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24644339, Length=266, Percent_Identity=31.9548872180451, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=28.2868525896414, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI28571526, Length=262, Percent_Identity=30.1526717557252, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI18859837, Length=214, Percent_Identity=36.4485981308411, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI24644337, Length=257, Percent_Identity=32.6848249027237, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI221331218, Length=200, Percent_Identity=30.5, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24665243, Length=200, Percent_Identity=30.5, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27205; Mature: 27073
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIMSLKGKVIVITGAAQGVGRATAELALNLGAKVCVVDLQREPLEAFAAANPDHVQAY CCCHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHHH IGSVSDPDFVAASIEHAISRFGKLDGLVNCAGIVRAAMIENMTLQTWNQVLECHLTGAFL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH WLQAVGSHLVERAKSGEQVKGSIVNISSEAGRRGSIGQINYASAKAGMLGMTMSAAREWG HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH KYGVRTNTVCLGMVETPMTETIRSERFRDTYLAQIPMGRWAQPEEVAGPIAFLLSDAAGY HCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH VLGQHLGVNGGFHLAS HHHHHCCCCCCEEECC >Mature Secondary Structure SEIMSLKGKVIVITGAAQGVGRATAELALNLGAKVCVVDLQREPLEAFAAANPDHVQAY CCHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHHH IGSVSDPDFVAASIEHAISRFGKLDGLVNCAGIVRAAMIENMTLQTWNQVLECHLTGAFL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH WLQAVGSHLVERAKSGEQVKGSIVNISSEAGRRGSIGQINYASAKAGMLGMTMSAAREWG HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH KYGVRTNTVCLGMVETPMTETIRSERFRDTYLAQIPMGRWAQPEEVAGPIAFLLSDAAGY HCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH VLGQHLGVNGGFHLAS HHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]