Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_007348 |
Length | 2,726,152 |
Click here to switch to the map view.
The map label for this gene is yfiQ [C]
Identifier: 73538383
GI number: 73538383
Start: 1233514
End: 1235661
Strand: Reverse
Name: yfiQ [C]
Synonym: Reut_B4556
Alternate gene names: 73538383
Gene position: 1235661-1233514 (Counterclockwise)
Preceding gene: 73538384
Following gene: 73538376
Centisome position: 45.33
GC content: 66.81
Gene sequence:
>2148_bases ATGTCGTCGCGCAAGCTCTATACCCATGACCAGCTACGGCGCGCGCTGCACCCGCGCAGCATCGCCGTGGTTGGGGCCAC CTCCAACGAACGCTCCTTCGCCGGGCGTTCGATGGCGAACCTGAAGCAGTTCCAGGGCACGGTGCATCTGGTCAATCCCC GCTATGCGGAAGTGAATGGCCAGGTCTGCTATCCATCGCTGTCAGCGCTGCCCGAAGTGCCGGACTGCGTGCTGATTGCC ACCGCACGCGACACGGTCGAGCCAATCGTGCAGGAATGCGCGCGGCTTGGCGTCGGCGGCGTCGTGCTGTTCGCGTCGGG CTATGCCGAGACCGGCAATCCGGAAAAAGCGGCAGACCAGGCGCGGCTGACGGCAATTGCCCGCGAAGGCGGCGTCACGC TGCTGGGCCCGAACAGCATCGGCTATGCAAACTACGTGACCAACGCGCTGGTGTCGTTCACGCCGTTGCCGGCCCGCACC GGCGAACTGCCACCGCATGCCATCGGGCTCGTGAGCCAGTCCGGTGCACTGGCCTTCGCGCTGCAGCAGGCCGCCAACCA CGGCACCGCGTTCAGCCATGTGTTCTCGTGCGGCAATGCGTGCGATATGGACGTTACGGACCAGATCGCCTACCTGGCCG GCGACCCCGCGTGCGCAGCGATTGCTTGCGTGTTCGAGGGCCTGTCGGATGCGAGCCGCATCGTCCGCGCGGCCGAGTTG TGTGCCGCCGCAGGCAAGCCGCTGGTGGTCTACAAGATGGCACGCGGCGCGCTTGGTGCCGCGGCAGCCATGTCGCACAC CGGATCGATGGCGGGGTCGGACCGTGCCTATTCCACGGCGTTGCGCGAGGCTGGCGTGATCCAGGTCGATACGCTGGAAC AGCTGGTGCCGACGACGGTGTTCTTCGCCAAGGCTCCCGCGCCGGTTGCCACGGGCGTAGCGATTGTGTCGGGCTCGGGC GGCGCAGGCATCGTGGCGGCCGACGAAGCGGAACGGTTCAACGTGCCGCTGCCGCAGCCAGCCGACGACACGCGTGCCAT TCTTGAAGCCCACATCCCGGACTTTGGCGCGGCGCGCAATCCATGCGACCTGACCGCACAGGCCACCAACAACTTCGATT CGTTCATCCGCTGCGGCGATGCGGTATTTGCCGATGCACAGTACGGCGCAGCCGTCGTGCCGCTGGTCGTGACCGGCGAC GGCAATGGCCGCCGCTTCGAAGTGTTCAACGAACTGGCGGTCAAGCACGGCAAGATGGCTTGCGGTCTGTGGATGTCGAA CTGGCTGGAAGGTCCCGACGCGCAGGAGGCGGAAGCCCTGCCGCGGCTCGCGCTGTTCCGCTCGGTGTCGCACTGCTTCG CCGCGCTGCGCGCATGGCATGAGCATGAGGCGTGGCGCATGAGCCGGCAAGCCGCGCGGCCGGATCGTCTCACCACCGCG TCTGTCGCCACGGCCGCGCGCGAACGCATTATTGCCGCGCCGGCCGATACGCTGACCGAACGCGAAGCCAAGGATGTACT GGCTGCGTACGGCGTGCCCGTGGTCGGAGAGGCGCTGGCGACCAGCGAACAGGATGCCGTGCGTGCTGCGCAAACCTGCG GCTATCCGGTGGTGCTCAAGGTTGAAAGCCCGGCTATCCCGCACAAATCGGAAGCCGGCGTGATCCGCCTCGGCCTCAAG AATGCCGATGAAGTGGCCGCCGCCTGGCGCGACGTCATGGCCAATGCCCGCAAGGTCACCACCGATGACCGCATCAACGG TGTGCTCGTGCAAAGCCAGGTGCCAGCCGGCGTCGAGATCCTGGTGGGTGCGCGCGTCGATCCGCATCTGGGCCCGTTGC TGATCGTCGGGCTTGGTGGCGTGATGGTCGAGCTGATGCAGGACACAGTGGCTGCAATGGCTCCTGTGTCGGCACAGAAG GCGCGAGACATGCTGGAGCAATTGCGGGGCGTGGCCCTGCTGAAGGGATTCCGCGGCGCCGCGGGTGTGGACATCGCTCG GCTGGCGGAAGTCATCGCCGCGCTGTCCGAGTTCGCGCATGACCAGCGCGATGCGATTGAAGAGTTTGACGTCAACCCGC TGATCTGCACGGCCGACCGCATCGTGGCCGTGGATGCGCTGATCTCGCGGCGCGCGGCGAAGCGCTGA
Upstream 100 bases:
>100_bases GGCGGGTCCGATCGCGTTCCTGTTGTCGGACGCTGCGGGCTACGTGCTCGGCCAGCACCTCGGCGTGAACGGCGGCTTCC ACCTGGCGAGCTGAAGCACT
Downstream 100 bases:
>100_bases TCCGTCAGGAAGCGGGCCGCGTGACGGCCTGCGCCAGCGCCACGAAGTTGCGTGTCGTGGCGATGCTGGTATCGTCCAGC GTCGCCAGCGCCAGCCCGAA
Product: CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 715; Mature: 714
Protein sequence:
>715_residues MSSRKLYTHDQLRRALHPRSIAVVGATSNERSFAGRSMANLKQFQGTVHLVNPRYAEVNGQVCYPSLSALPEVPDCVLIA TARDTVEPIVQECARLGVGGVVLFASGYAETGNPEKAADQARLTAIAREGGVTLLGPNSIGYANYVTNALVSFTPLPART GELPPHAIGLVSQSGALAFALQQAANHGTAFSHVFSCGNACDMDVTDQIAYLAGDPACAAIACVFEGLSDASRIVRAAEL CAAAGKPLVVYKMARGALGAAAAMSHTGSMAGSDRAYSTALREAGVIQVDTLEQLVPTTVFFAKAPAPVATGVAIVSGSG GAGIVAADEAERFNVPLPQPADDTRAILEAHIPDFGAARNPCDLTAQATNNFDSFIRCGDAVFADAQYGAAVVPLVVTGD GNGRRFEVFNELAVKHGKMACGLWMSNWLEGPDAQEAEALPRLALFRSVSHCFAALRAWHEHEAWRMSRQAARPDRLTTA SVATAARERIIAAPADTLTEREAKDVLAAYGVPVVGEALATSEQDAVRAAQTCGYPVVLKVESPAIPHKSEAGVIRLGLK NADEVAAAWRDVMANARKVTTDDRINGVLVQSQVPAGVEILVGARVDPHLGPLLIVGLGGVMVELMQDTVAAMAPVSAQK ARDMLEQLRGVALLKGFRGAAGVDIARLAEVIAALSEFAHDQRDAIEEFDVNPLICTADRIVAVDALISRRAAKR
Sequences:
>Translated_715_residues MSSRKLYTHDQLRRALHPRSIAVVGATSNERSFAGRSMANLKQFQGTVHLVNPRYAEVNGQVCYPSLSALPEVPDCVLIA TARDTVEPIVQECARLGVGGVVLFASGYAETGNPEKAADQARLTAIAREGGVTLLGPNSIGYANYVTNALVSFTPLPART GELPPHAIGLVSQSGALAFALQQAANHGTAFSHVFSCGNACDMDVTDQIAYLAGDPACAAIACVFEGLSDASRIVRAAEL CAAAGKPLVVYKMARGALGAAAAMSHTGSMAGSDRAYSTALREAGVIQVDTLEQLVPTTVFFAKAPAPVATGVAIVSGSG GAGIVAADEAERFNVPLPQPADDTRAILEAHIPDFGAARNPCDLTAQATNNFDSFIRCGDAVFADAQYGAAVVPLVVTGD GNGRRFEVFNELAVKHGKMACGLWMSNWLEGPDAQEAEALPRLALFRSVSHCFAALRAWHEHEAWRMSRQAARPDRLTTA SVATAARERIIAAPADTLTEREAKDVLAAYGVPVVGEALATSEQDAVRAAQTCGYPVVLKVESPAIPHKSEAGVIRLGLK NADEVAAAWRDVMANARKVTTDDRINGVLVQSQVPAGVEILVGARVDPHLGPLLIVGLGGVMVELMQDTVAAMAPVSAQK ARDMLEQLRGVALLKGFRGAAGVDIARLAEVIAALSEFAHDQRDAIEEFDVNPLICTADRIVAVDALISRRAAKR >Mature_714_residues SSRKLYTHDQLRRALHPRSIAVVGATSNERSFAGRSMANLKQFQGTVHLVNPRYAEVNGQVCYPSLSALPEVPDCVLIAT ARDTVEPIVQECARLGVGGVVLFASGYAETGNPEKAADQARLTAIAREGGVTLLGPNSIGYANYVTNALVSFTPLPARTG ELPPHAIGLVSQSGALAFALQQAANHGTAFSHVFSCGNACDMDVTDQIAYLAGDPACAAIACVFEGLSDASRIVRAAELC AAAGKPLVVYKMARGALGAAAAMSHTGSMAGSDRAYSTALREAGVIQVDTLEQLVPTTVFFAKAPAPVATGVAIVSGSGG AGIVAADEAERFNVPLPQPADDTRAILEAHIPDFGAARNPCDLTAQATNNFDSFIRCGDAVFADAQYGAAVVPLVVTGDG NGRRFEVFNELAVKHGKMACGLWMSNWLEGPDAQEAEALPRLALFRSVSHCFAALRAWHEHEAWRMSRQAARPDRLTTAS VATAARERIIAAPADTLTEREAKDVLAAYGVPVVGEALATSEQDAVRAAQTCGYPVVLKVESPAIPHKSEAGVIRLGLKN ADEVAAAWRDVMANARKVTTDDRINGVLVQSQVPAGVEILVGARVDPHLGPLLIVGLGGVMVELMQDTVAAMAPVSAQKA RDMLEQLRGVALLKGFRGAAGVDIARLAEVIAALSEFAHDQRDAIEEFDVNPLICTADRIVAVDALISRRAAKR
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=704, Percent_Identity=27.8409090909091, Blast_Score=212, Evalue=6e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 75098; Mature: 74967
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRKLYTHDQLRRALHPRSIAVVGATSNERSFAGRSMANLKQFQGTVHLVNPRYAEVNG CCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHCCHHHHHHHHHCCEEEEECCEEEECCC QVCYPSLSALPEVPDCVLIATARDTVEPIVQECARLGVGGVVLFASGYAETGNPEKAADQ CEECCCHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH ARLTAIAREGGVTLLGPNSIGYANYVTNALVSFTPLPARTGELPPHAIGLVSQSGALAFA HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHEEEECCCCHHHHH LQQAANHGTAFSHVFSCGNACDMDVTDQIAYLAGDPACAAIACVFEGLSDASRIVRAAEL HHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHH CAAAGKPLVVYKMARGALGAAAAMSHTGSMAGSDRAYSTALREAGVIQVDTLEQLVPTTV HHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHE FFAKAPAPVATGVAIVSGSGGAGIVAADEAERFNVPLPQPADDTRAILEAHIPDFGAARN EEECCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC PCDLTAQATNNFDSFIRCGDAVFADAQYGAAVVPLVVTGDGNGRRFEVFNELAVKHGKMA CCCEEEHHCCCHHHHHHHCCHHEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCHH CGLWMSNWLEGPDAQEAEALPRLALFRSVSHCFAALRAWHEHEAWRMSRQAARPDRLTTA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH SVATAARERIIAAPADTLTEREAKDVLAAYGVPVVGEALATSEQDAVRAAQTCGYPVVLK HHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCEEEE VESPAIPHKSEAGVIRLGLKNADEVAAAWRDVMANARKVTTDDRINGVLVQSQVPAGVEI ECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEE LVGARVDPHLGPLLIVGLGGVMVELMQDTVAAMAPVSAQKARDMLEQLRGVALLKGFRGA EEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC AGVDIARLAEVIAALSEFAHDQRDAIEEFDVNPLICTADRIVAVDALISRRAAKR CCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SSRKLYTHDQLRRALHPRSIAVVGATSNERSFAGRSMANLKQFQGTVHLVNPRYAEVNG CCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHCCHHHHHHHHHCCEEEEECCEEEECCC QVCYPSLSALPEVPDCVLIATARDTVEPIVQECARLGVGGVVLFASGYAETGNPEKAADQ CEECCCHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH ARLTAIAREGGVTLLGPNSIGYANYVTNALVSFTPLPARTGELPPHAIGLVSQSGALAFA HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHEEEECCCCHHHHH LQQAANHGTAFSHVFSCGNACDMDVTDQIAYLAGDPACAAIACVFEGLSDASRIVRAAEL HHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHH CAAAGKPLVVYKMARGALGAAAAMSHTGSMAGSDRAYSTALREAGVIQVDTLEQLVPTTV HHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHE FFAKAPAPVATGVAIVSGSGGAGIVAADEAERFNVPLPQPADDTRAILEAHIPDFGAARN EEECCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC PCDLTAQATNNFDSFIRCGDAVFADAQYGAAVVPLVVTGDGNGRRFEVFNELAVKHGKMA CCCEEEHHCCCHHHHHHHCCHHEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCHH CGLWMSNWLEGPDAQEAEALPRLALFRSVSHCFAALRAWHEHEAWRMSRQAARPDRLTTA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH SVATAARERIIAAPADTLTEREAKDVLAAYGVPVVGEALATSEQDAVRAAQTCGYPVVLK HHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCEEEE VESPAIPHKSEAGVIRLGLKNADEVAAAWRDVMANARKVTTDDRINGVLVQSQVPAGVEI ECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEE LVGARVDPHLGPLLIVGLGGVMVELMQDTVAAMAPVSAQKARDMLEQLRGVALLKGFRGA EEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC AGVDIARLAEVIAALSEFAHDQRDAIEEFDVNPLICTADRIVAVDALISRRAAKR CCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]