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The map label for this gene is yjdC [C]

Identifier: 73538343

GI number: 73538343

Start: 1187074

End: 1187667

Strand: Reverse

Name: yjdC [C]

Synonym: Reut_B4516

Alternate gene names: 73538343

Gene position: 1187667-1187074 (Counterclockwise)

Preceding gene: 73538344

Following gene: 73538342

Centisome position: 43.57

GC content: 63.8

Gene sequence:

>594_bases
ATGTCCGACGAATCCTCCATCGAAGCCCGCCTGCTCGAAGCCACCGAGCAACTTATCTATTCCGGCGGTATCCACGCCAC
CGGCATGGACGCCATCGTCAAAGCGTCGGGTGTGGCCCGCAAAAGCATCTACCGGCTCTATCCCACCAAGGAAGCGCTGG
TCGCGGCAGCGTTGCTGCACCGCGATGCGCGCTGGATGGCATGGTTCATCCGTTCGACGCCGCCCACGGACGATCCATTT
GAGCGCGTGATGTCGATCTTCCCGACGCTGCGGCAATGGTTCGAATCAGAGGGGTTCCACGGCTGCGCCTTCATCAATGC
GGCAGGCGAGACGGAAGATCCGGACAGCGAGATCCGCGCCGTGTCGCGGTTCCACAAGCAGCGGTTACTGGACTACCTGA
ACGAACTCACACAGGCGTGCGGCCTGCCCAATTCCAAGGAGACCGCGCGGCAACTGCTTGTATTGATCGACGGCGCCACC
GCCGTCGCGCTGGTCAGCGGCGATGTCAGAGCCGCCGACAGTGCCGGCAGGGCCGCGGCTCTGCTGCTCGAAGCTTCCCG
GTCCGCCAACGGGCCATCTTCCTCCCACCACTGA

Upstream 100 bases:

>100_bases
GCCGCACTTGGTTTGCCGATAATTTCCCGTTGACACCGGAGAATGATCGTTCTACCATTGTTTCTATCGGAGAACGATCG
TTCTTCCTGGAGTTGCCACT

Downstream 100 bases:

>100_bases
GGTGCTCCCATGTCTTCCAACGCCGAAACCCGTCCGCCACTTCCGCCGTTCACACGCGAATCCGCCATCGAGAAGGTCCG
TCTTGCCGAAGATGGCTGGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcriptional Regulator Tetr Family; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcriptional Regulator Protein TetR Family; Transcriptional Regulatory Protein; Transcription Regulator Protein; TetR-Family Protein Transcriptional Regulator; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Repressor

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSDESSIEARLLEATEQLIYSGGIHATGMDAIVKASGVARKSIYRLYPTKEALVAAALLHRDARWMAWFIRSTPPTDDPF
ERVMSIFPTLRQWFESEGFHGCAFINAAGETEDPDSEIRAVSRFHKQRLLDYLNELTQACGLPNSKETARQLLVLIDGAT
AVALVSGDVRAADSAGRAAALLLEASRSANGPSSSHH

Sequences:

>Translated_197_residues
MSDESSIEARLLEATEQLIYSGGIHATGMDAIVKASGVARKSIYRLYPTKEALVAAALLHRDARWMAWFIRSTPPTDDPF
ERVMSIFPTLRQWFESEGFHGCAFINAAGETEDPDSEIRAVSRFHKQRLLDYLNELTQACGLPNSKETARQLLVLIDGAT
AVALVSGDVRAADSAGRAAALLLEASRSANGPSSSHH
>Mature_196_residues
SDESSIEARLLEATEQLIYSGGIHATGMDAIVKASGVARKSIYRLYPTKEALVAAALLHRDARWMAWFIRSTPPTDDPFE
RVMSIFPTLRQWFESEGFHGCAFINAAGETEDPDSEIRAVSRFHKQRLLDYLNELTQACGLPNSKETARQLLVLIDGATA
VALVSGDVRAADSAGRAAALLLEASRSANGPSSSHH

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21443; Mature: 21312

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDESSIEARLLEATEQLIYSGGIHATGMDAIVKASGVARKSIYRLYPTKEALVAAALLH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RDARWMAWFIRSTPPTDDPFERVMSIFPTLRQWFESEGFHGCAFINAAGETEDPDSEIRA
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH
VSRFHKQRLLDYLNELTQACGLPNSKETARQLLVLIDGATAVALVSGDVRAADSAGRAAA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHH
LLLEASRSANGPSSSHH
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SDESSIEARLLEATEQLIYSGGIHATGMDAIVKASGVARKSIYRLYPTKEALVAAALLH
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RDARWMAWFIRSTPPTDDPFERVMSIFPTLRQWFESEGFHGCAFINAAGETEDPDSEIRA
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH
VSRFHKQRLLDYLNELTQACGLPNSKETARQLLVLIDGATAVALVSGDVRAADSAGRAAA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHH
LLLEASRSANGPSSSHH
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA