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The map label for this gene is glxA [H]

Identifier: 73538311

GI number: 73538311

Start: 1153181

End: 1154266

Strand: Direct

Name: glxA [H]

Synonym: Reut_B4484

Alternate gene names: 73538311

Gene position: 1153181-1154266 (Clockwise)

Preceding gene: 73538310

Following gene: 73538317

Centisome position: 42.3

GC content: 61.33

Gene sequence:

>1086_bases
ATGAAGATGAAAATTGCTCTTGTCGTGTTTGATGGGGTTCAGGCGCTGGACGTGGCCGGCCCGATGGACGTATTTGCGGA
AGCCAACCACCTGCTGCCTGCCCATAAGCGCTACGAAGTCACACTGGTCGGTGTTCGCCCCACCAGCGTGATGTGTTCAA
ACGGTATGCAGATCAGCGTGCCTGTTGACTATCGCAACTACCACGACGATTGCGATCTTCTGCTGGTTGCGGGCGGGCCG
CGCGCTCCCGGGATGGAGCCGGACCCGGAGTTCTTGACCTGGCTTCATGACAAGTCGCTGAAAGCGCAAAGATTCGGTGC
CGTGTGCAACGGGGTATTCCTGCTTGCTCATGCCGGGCTCCTCGATGGGCGGGAAGTCACGACGCACTGGTCCGAGACCA
AGCGGCTCCAGGACCATTTCCCTCGTGCGTTCGTGCGGCCGGACAAGATCTTTGTCCGCGACGGCAGCCTGTTCACGTGC
GGCGGCGTCACCGCCGGCATCGACCTCTGCCTCGCGTTGCTTGCTGAAGACTTTGGTCACGCCCTGGCGGTAAAAGTCGC
GAAGCGGCTGATCGTCTATATTCGCCGCGACGGAGGGCAGTCCCAGTACAGCCCGTACCTTGCCGTGGGACCCGAAGAGG
ACTCCATCGTCAGCAAGGCCCGGCGGTACGTGGACGATCACATTGCGGACGCCTTCTCCATCGAGGAACTGGCCGATGCC
GTTGGCGTGAGCCGCCGGACATTCAGCCGCGTCTTCGCCAAACACGCCAAGGTCTCGCCTTCCGTCTTCGTGGAGCAGGT
GCGCGTGGATTTTGCAAAGAAGCTGCTCGAGCAGACCGATGTGCCGCTCAAGACCATCGCGTTCAGGAGTGGATTCCATA
GCTCGACACATATGCGGATGATCTTCTCGCGGCGCCTTGATATCACACCGAAGGAATATCGCCAGCGCCTTCAGGAAACC
GAGGGCCAGTCCGAGAATATGGCGCACTACCACGGCCACGGCCAGCCTGCTTCGCTGCCACACCAGCCAGGACGCGAGGA
TCACCGACGCCCGGCGTCGCATGCGCTTGCCGCTGCGGCACATTGA

Upstream 100 bases:

>100_bases
CATCGACCGCAGTTCGGCATCTTTTCGCCGGGCTGCACGATGGGGATTCGATTGCCCGTACCACTACGCAACACAAGTGG
CTGCTGCCAATGTGACGTAA

Downstream 100 bases:

>100_bases
GCCTGCGTCGACCGGCGCGGGCTGGTGCTGACGGGATGCGTCAGACCAGCTCGCACCAATAACGCCACGGATGCCAGTCA
CCGCCCGGACAGCAGCTCGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKMKIALVVFDGVQALDVAGPMDVFAEANHLLPAHKRYEVTLVGVRPTSVMCSNGMQISVPVDYRNYHDDCDLLLVAGGP
RAPGMEPDPEFLTWLHDKSLKAQRFGAVCNGVFLLAHAGLLDGREVTTHWSETKRLQDHFPRAFVRPDKIFVRDGSLFTC
GGVTAGIDLCLALLAEDFGHALAVKVAKRLIVYIRRDGGQSQYSPYLAVGPEEDSIVSKARRYVDDHIADAFSIEELADA
VGVSRRTFSRVFAKHAKVSPSVFVEQVRVDFAKKLLEQTDVPLKTIAFRSGFHSSTHMRMIFSRRLDITPKEYRQRLQET
EGQSENMAHYHGHGQPASLPHQPGREDHRRPASHALAAAAH

Sequences:

>Translated_361_residues
MKMKIALVVFDGVQALDVAGPMDVFAEANHLLPAHKRYEVTLVGVRPTSVMCSNGMQISVPVDYRNYHDDCDLLLVAGGP
RAPGMEPDPEFLTWLHDKSLKAQRFGAVCNGVFLLAHAGLLDGREVTTHWSETKRLQDHFPRAFVRPDKIFVRDGSLFTC
GGVTAGIDLCLALLAEDFGHALAVKVAKRLIVYIRRDGGQSQYSPYLAVGPEEDSIVSKARRYVDDHIADAFSIEELADA
VGVSRRTFSRVFAKHAKVSPSVFVEQVRVDFAKKLLEQTDVPLKTIAFRSGFHSSTHMRMIFSRRLDITPKEYRQRLQET
EGQSENMAHYHGHGQPASLPHQPGREDHRRPASHALAAAAH
>Mature_361_residues
MKMKIALVVFDGVQALDVAGPMDVFAEANHLLPAHKRYEVTLVGVRPTSVMCSNGMQISVPVDYRNYHDDCDLLLVAGGP
RAPGMEPDPEFLTWLHDKSLKAQRFGAVCNGVFLLAHAGLLDGREVTTHWSETKRLQDHFPRAFVRPDKIFVRDGSLFTC
GGVTAGIDLCLALLAEDFGHALAVKVAKRLIVYIRRDGGQSQYSPYLAVGPEEDSIVSKARRYVDDHIADAFSIEELADA
VGVSRRTFSRVFAKHAKVSPSVFVEQVRVDFAKKLLEQTDVPLKTIAFRSGFHSSTHMRMIFSRRLDITPKEYRQRLQET
EGQSENMAHYHGHGQPASLPHQPGREDHRRPASHALAAAAH

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 40155; Mature: 40155

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKIALVVFDGVQALDVAGPMDVFAEANHLLPAHKRYEVTLVGVRPTSVMCSNGMQISV
CCEEEEEEEECCCHHHHCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCHHEECCCCEEEE
PVDYRNYHDDCDLLLVAGGPRAPGMEPDPEFLTWLHDKSLKAQRFGAVCNGVFLLAHAGL
EECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
LDGREVTTHWSETKRLQDHFPRAFVRPDKIFVRDGSLFTCGGVTAGIDLCLALLAEDFGH
CCCCHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHH
ALAVKVAKRLIVYIRRDGGQSQYSPYLAVGPEEDSIVSKARRYVDDHIADAFSIEELADA
HHHHHHHHHHEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVSRRTFSRVFAKHAKVSPSVFVEQVRVDFAKKLLEQTDVPLKTIAFRSGFHSSTHMRM
HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHH
IFSRRLDITPKEYRQRLQETEGQSENMAHYHGHGQPASLPHQPGREDHRRPASHALAAAA
HHHHCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCHHHCCHHHHHHHHCC
H
C
>Mature Secondary Structure
MKMKIALVVFDGVQALDVAGPMDVFAEANHLLPAHKRYEVTLVGVRPTSVMCSNGMQISV
CCEEEEEEEECCCHHHHCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCHHEECCCCEEEE
PVDYRNYHDDCDLLLVAGGPRAPGMEPDPEFLTWLHDKSLKAQRFGAVCNGVFLLAHAGL
EECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
LDGREVTTHWSETKRLQDHFPRAFVRPDKIFVRDGSLFTCGGVTAGIDLCLALLAEDFGH
CCCCHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHH
ALAVKVAKRLIVYIRRDGGQSQYSPYLAVGPEEDSIVSKARRYVDDHIADAFSIEELADA
HHHHHHHHHHEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVSRRTFSRVFAKHAKVSPSVFVEQVRVDFAKKLLEQTDVPLKTIAFRSGFHSSTHMRM
HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHH
IFSRRLDITPKEYRQRLQETEGQSENMAHYHGHGQPASLPHQPGREDHRRPASHALAAAA
HHHHCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCHHHCCHHHHHHHHCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]