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The map label for this gene is lpsJ [H]

Identifier: 73538310

GI number: 73538310

Start: 1152201

End: 1152779

Strand: Direct

Name: lpsJ [H]

Synonym: Reut_B4483

Alternate gene names: 73538310

Gene position: 1152201-1152779 (Clockwise)

Preceding gene: 73538309

Following gene: 73538311

Centisome position: 42.26

GC content: 59.07

Gene sequence:

>579_bases
ATGGTATGGACCACCAACGAGATGGTTGAGCGCGCGACGACGCAGATCAACGATGGGGATTTTGTCTATCTGGGCCCGGG
CCTGCCCGCGGCGGTGGCCAGTCGGATTCCGGCCGAAACTGAAGTCTGGCTGCATGTCCACGACGGCATTCCTGGATTCA
TGCACTATCCAACTGACGATTTCATGGATGCAGGATTCATTGCCGGCAGCCAGGGACAATGCACCGAAGCCAGACCCAGG
GAGATCTACCATTCCACGGACTCCTTCGCGGAAATGACCAGCCTGTCCATGGATCTGGCGATCCTCGACGCAAGCGGCGC
ACATGGAAACGGTATCGACATTGCCAGGTGGGCAATCGGATGCGGCGCAAAGCACGTCGTACTGCTGCTTGGAGGCGTTC
GCAGCATCAAGGACATCACCGATCTCCTGACGAGCAGCCGGGGCGACGGCGTCTCCTACAGGGTCATCTCGGACCAGGCT
GTCATCGATGTCACCGATCAAGGCATGGCCTTTGTCGAAGGAGCGGTTGGCGTAGCGCCGGCCGAAACTGAGAAGCCGAA
ATCGCTTCAGTTCGCTTGA

Upstream 100 bases:

>100_bases
TATGGCGAGTTCCGTGCGTCCGTGGAAAGTCAGATCCGCTACGGGGAGTCCCCACAGTGTGCGGAAGTCGATAGCCTGAA
ATGAACAGGAGGTAAGCGGG

Downstream 100 bases:

>100_bases
CGCCGCCACCCGGCGTATCACGGATGGCGCGGATATCCGCGCCAGTCAACGGATGGATCTGATGGTCATTCCGCCGCTCA
TCACCAGCCGTCCCTGACGC

Product: 3-oxoacid CoA-transferase subunit B

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MVWTTNEMVERATTQINDGDFVYLGPGLPAAVASRIPAETEVWLHVHDGIPGFMHYPTDDFMDAGFIAGSQGQCTEARPR
EIYHSTDSFAEMTSLSMDLAILDASGAHGNGIDIARWAIGCGAKHVVLLLGGVRSIKDITDLLTSSRGDGVSYRVISDQA
VIDVTDQGMAFVEGAVGVAPAETEKPKSLQFA

Sequences:

>Translated_192_residues
MVWTTNEMVERATTQINDGDFVYLGPGLPAAVASRIPAETEVWLHVHDGIPGFMHYPTDDFMDAGFIAGSQGQCTEARPR
EIYHSTDSFAEMTSLSMDLAILDASGAHGNGIDIARWAIGCGAKHVVLLLGGVRSIKDITDLLTSSRGDGVSYRVISDQA
VIDVTDQGMAFVEGAVGVAPAETEKPKSLQFA
>Mature_192_residues
MVWTTNEMVERATTQINDGDFVYLGPGLPAAVASRIPAETEVWLHVHDGIPGFMHYPTDDFMDAGFIAGSQGQCTEARPR
EIYHSTDSFAEMTSLSMDLAILDASGAHGNGIDIARWAIGCGAKHVVLLLGGVRSIKDITDLLTSSRGDGVSYRVISDQA
VIDVTDQGMAFVEGAVGVAPAETEKPKSLQFA

Specific function: Unknown

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 20485; Mature: 20485

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWTTNEMVERATTQINDGDFVYLGPGLPAAVASRIPAETEVWLHVHDGIPGFMHYPTDD
CCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCEECCCHH
FMDAGFIAGSQGQCTEARPREIYHSTDSFAEMTSLSMDLAILDASGAHGNGIDIARWAIG
HCCCCEEECCCCCCCCCCCHHHHCCCHHHHHHHHCEEEEEEEECCCCCCCCCCHHHHHHC
CGAKHVVLLLGGVRSIKDITDLLTSSRGDGVSYRVISDQAVIDVTDQGMAFVEGAVGVAP
CCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCEEECCCCCCCC
AETEKPKSLQFA
CCCCCCCCCCCC
>Mature Secondary Structure
MVWTTNEMVERATTQINDGDFVYLGPGLPAAVASRIPAETEVWLHVHDGIPGFMHYPTDD
CCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCEECCCHH
FMDAGFIAGSQGQCTEARPREIYHSTDSFAEMTSLSMDLAILDASGAHGNGIDIARWAIG
HCCCCEEECCCCCCCCCCCHHHHCCCHHHHHHHHCEEEEEEEECCCCCCCCCCHHHHHHC
CGAKHVVLLLGGVRSIKDITDLLTSSRGDGVSYRVISDQAVIDVTDQGMAFVEGAVGVAP
CCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCEEECCCCCCCC
AETEKPKSLQFA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]