| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is Dml [H]
Identifier: 73538301
GI number: 73538301
Start: 1141400
End: 1142284
Strand: Direct
Name: Dml [H]
Synonym: Reut_B4474
Alternate gene names: 73538301
Gene position: 1141400-1142284 (Clockwise)
Preceding gene: 73538299
Following gene: 73538302
Centisome position: 41.87
GC content: 65.08
Gene sequence:
>885_bases ATGACTTCATCCGCTTCCTCCCGCAGACAGGCATTCCGGCAGCAGGCCGCGTCAAAGAATGCCCTGCTCATCCCCGGCGC CTTCAACGCCATGAGTGCGCGGGTCATCGAAGACCTCGGCTTCAAGGCCGTGTACCTCACCGGCGCCGGTGTCACCAATA TGTCATTCGGCCTGCCTGACCTCGGTTTCATCGGGCTCAGCGATATCGCCGAGCACACGGCGCGGGTCCGCGATGCGGTG GAACTGCCGTTGCTCGTCGATGCGGATACCGGTTTCGGCAACGCGCTGAACGTGCGCCAGGCCGTACGCACCCTGGAGCG CGCGGGCGCCGATGCGATCCAGCTCGAGGACCAGGTCATGCCGAAGAAATGCGGGCACTTTGCCGGCAAGGATGTCGTGA GCACGGACGAGATGGTGGCCAAGATCCGGGCCGCGACGGACGCGCGCGACGACCCCGACTTCCAGATCGTCGCGCGCACG GATGCCGCGGCCGTGCACGGCATCGAGGATGCGATCGATCGCGGACACCGCTTTGCCGAAGCCGGCGCCGATATCCTGTT CTTCGAGGCGATCGAGGGTCAAAGCGAGATCGCGCGCCTGCCGGGGCTGTTCGATGTGCCGCTGCTGATCAATATCGTGA TCGGCGGAAAAACGCCGGTGCAAGGGCTCGACGCGCTGGAGCGGCTTGGCTACGGCCTGGTGCTCTACGCGAACGCCGCA TTGCAAGGCGCCGTGCGCGGCATGCAGCAGGCACTCGGCAACCTGCAGGCAAACGGCCAGATGGACGAGGATCCCGCCAT CGTCGTGCCATTCAGCGAGCGCCAGCGGCTCGTCAGGAAGCCGATGTACGACGAACTCGATGCTCGCTACAAGACGGATG AGTGA
Upstream 100 bases:
>100_bases GTCGGGCACATCCGCATGATCGCGCCTCACCGATTCGACCTGTCCTGATTGCGCGGCTGTCAGGCTGCCGACGACACGCC GCCTCACCGGAGAACCCCAC
Downstream 100 bases:
>100_bases GTAGGGGACATCATCCGCCTGCGAAGCGCCCGAATGTGCGCCTCCGTCTGACAGCCGGTGCAGAGGCGATCATTTACATG GCCCGGTAAGAATGTGCGGC
Product: 2,3-dimethylmalate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTSSASSRRQAFRQQAASKNALLIPGAFNAMSARVIEDLGFKAVYLTGAGVTNMSFGLPDLGFIGLSDIAEHTARVRDAV ELPLLVDADTGFGNALNVRQAVRTLERAGADAIQLEDQVMPKKCGHFAGKDVVSTDEMVAKIRAATDARDDPDFQIVART DAAAVHGIEDAIDRGHRFAEAGADILFFEAIEGQSEIARLPGLFDVPLLINIVIGGKTPVQGLDALERLGYGLVLYANAA LQGAVRGMQQALGNLQANGQMDEDPAIVVPFSERQRLVRKPMYDELDARYKTDE
Sequences:
>Translated_294_residues MTSSASSRRQAFRQQAASKNALLIPGAFNAMSARVIEDLGFKAVYLTGAGVTNMSFGLPDLGFIGLSDIAEHTARVRDAV ELPLLVDADTGFGNALNVRQAVRTLERAGADAIQLEDQVMPKKCGHFAGKDVVSTDEMVAKIRAATDARDDPDFQIVART DAAAVHGIEDAIDRGHRFAEAGADILFFEAIEGQSEIARLPGLFDVPLLINIVIGGKTPVQGLDALERLGYGLVLYANAA LQGAVRGMQQALGNLQANGQMDEDPAIVVPFSERQRLVRKPMYDELDARYKTDE >Mature_293_residues TSSASSRRQAFRQQAASKNALLIPGAFNAMSARVIEDLGFKAVYLTGAGVTNMSFGLPDLGFIGLSDIAEHTARVRDAVE LPLLVDADTGFGNALNVRQAVRTLERAGADAIQLEDQVMPKKCGHFAGKDVVSTDEMVAKIRAATDARDDPDFQIVARTD AAAVHGIEDAIDRGHRFAEAGADILFFEAIEGQSEIARLPGLFDVPLLINIVIGGKTPVQGLDALERLGYGLVLYANAAL QGAVRGMQQALGNLQANGQMDEDPAIVVPFSERQRLVRKPMYDELDARYKTDE
Specific function: Catalyzes the formation of proponate and pyruvate from (2R,3S)-2,3-dimethylmalate. Has no activity toward dimethylmaleate, malate, citramalate, isocitrate and citrate [H]
COG id: COG2513
COG function: function code G; PEP phosphonomutase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isocitrate lyase/PEP mutase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786525, Length=257, Percent_Identity=42.4124513618677, Blast_Score=191, Evalue=5e-50, Organism=Escherichia coli, GI1790445, Length=150, Percent_Identity=35.3333333333333, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000918 - InterPro: IPR018523 - InterPro: IPR015813 [H]
Pfam domain/function: PF00463 ICL [H]
EC number: =4.1.3.32 [H]
Molecular weight: Translated: 31612; Mature: 31481
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSASSRRQAFRQQAASKNALLIPGAFNAMSARVIEDLGFKAVYLTGAGVTNMSFGLPD CCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC LGFIGLSDIAEHTARVRDAVELPLLVDADTGFGNALNVRQAVRTLERAGADAIQLEDQVM CCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHH PKKCGHFAGKDVVSTDEMVAKIRAATDARDDPDFQIVARTDAAAVHGIEDAIDRGHRFAE HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH AGADILFFEAIEGQSEIARLPGLFDVPLLINIVIGGKTPVQGLDALERLGYGLVLYANAA CCCCEEEEEECCCHHHHHHCCCCCCCHHHEEEEECCCCCHHHHHHHHHCCCCEEEEEHHH LQGAVRGMQQALGNLQANGQMDEDPAIVVPFSERQRLVRKPMYDELDARYKTDE HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHCCCHHHHCCCCCCCC >Mature Secondary Structure TSSASSRRQAFRQQAASKNALLIPGAFNAMSARVIEDLGFKAVYLTGAGVTNMSFGLPD CCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC LGFIGLSDIAEHTARVRDAVELPLLVDADTGFGNALNVRQAVRTLERAGADAIQLEDQVM CCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHH PKKCGHFAGKDVVSTDEMVAKIRAATDARDDPDFQIVARTDAAAVHGIEDAIDRGHRFAE HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH AGADILFFEAIEGQSEIARLPGLFDVPLLINIVIGGKTPVQGLDALERLGYGLVLYANAA CCCCEEEEEECCCHHHHHHCCCCCCCHHHEEEEECCCCCHHHHHHHHHCCCCEEEEEHHH LQGAVRGMQQALGNLQANGQMDEDPAIVVPFSERQRLVRKPMYDELDARYKTDE HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA