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The map label for this gene is 73538262

Identifier: 73538262

GI number: 73538262

Start: 1093864

End: 1094646

Strand: Direct

Name: 73538262

Synonym: Reut_B4434

Alternate gene names: NA

Gene position: 1093864-1094646 (Clockwise)

Preceding gene: 73538261

Following gene: 73538263

Centisome position: 40.12

GC content: 68.71

Gene sequence:

>783_bases
ATGAACCTGCGATGGATCTGCGTCCTCACGGCCACCTGCCTCACGCTGTACGCGCAGGCCAGCCCGCTCGCGCTCCCCGA
TCCGCCCGATATGGCATTCGCGCCGACCCTGGGCAAGCAGGTGCCGCTCGATCTGGTCTTCCGCGACGACGACGGTACGC
CGGTTCGGCTGCGCGAACTGTCGGCGCATCGGCCGGTGATTCTCGTCCCCGGCTACTACCATTGCCCCAACCTGTGCAGC
ACGGTCATGGATGGCGTGCTGGAATCGCTGGCCCAGGCACATCTGCCACGCGGCGCGTGGCGCGTGGTCGCCTTCAGCAT
CGACAGCGGCGAGACAGTCGCCGTGGCCGCTGCGAAGAAGCAAAGCTATGGCGCGCTGGTGGCCGCTTCCGGCGGGAACC
TGCATATGCTGACCGGCGATACCGCAGCCGTCGGCACGTTGATGCAGGCCATCGGCATGCGCGTTTCCCGCCCACCCGGC
GCAAGCGAGATCGCCCATGCCGCGGGCTTTGCCGTGCTGACCCCCGACGGCCGCATCGCCCAGGCCTTCAACGGCGTGCG
TTTCGATGCATCGGCCCTGCGCACCGCCATCGAGCGCGCCTCGGCCGGGAAGGTCGGCTCTCCGGCGCAGCAGTTGCTGA
TGCGCTGCGTCCACTTCGATCCGCTGACCGGACGCTACACCGTGACGATCCTCGACGGCATCCGGGCCTTGTTCCTTGGC
GCGTTCGCCGCGCTGGCCGGCTGGTGGCTGTGGCAACACCGGCAGCGGCGGCGCTCATCATGA

Upstream 100 bases:

>100_bases
TCAAAGGCTGGGGCTGGGTCGACAAGCGCGCCGGTGTCGCCCATATCCCGGTGGAGCGGGCCATGGCATTGATGGCCGAA
ACACCGCCGGAGCCCGCACG

Downstream 100 bases:

>100_bases
ACAGCAGCTTCCATCTGTTTCCCGAGAGTGCGTCGCTGGCAGCCGGGCGCTACGACACCCTGATGCTGTCGCTCACCGCG
CTGCTCTGTGTGGTCGCGCT

Product: SCO1/SenC family protein

Products: NA

Alternate protein names: SCO1/SenC Family Protein; SenC/PrrC; SCO1/SenC/PrrC Family Protein; Cytochrome C Oxidase Synthesis Factor; SenC/PrrC-Like; Respiratory System Biogenesis Protein

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNLRWICVLTATCLTLYAQASPLALPDPPDMAFAPTLGKQVPLDLVFRDDDGTPVRLRELSAHRPVILVPGYYHCPNLCS
TVMDGVLESLAQAHLPRGAWRVVAFSIDSGETVAVAAAKKQSYGALVAASGGNLHMLTGDTAAVGTLMQAIGMRVSRPPG
ASEIAHAAGFAVLTPDGRIAQAFNGVRFDASALRTAIERASAGKVGSPAQQLLMRCVHFDPLTGRYTVTILDGIRALFLG
AFAALAGWWLWQHRQRRRSS

Sequences:

>Translated_260_residues
MNLRWICVLTATCLTLYAQASPLALPDPPDMAFAPTLGKQVPLDLVFRDDDGTPVRLRELSAHRPVILVPGYYHCPNLCS
TVMDGVLESLAQAHLPRGAWRVVAFSIDSGETVAVAAAKKQSYGALVAASGGNLHMLTGDTAAVGTLMQAIGMRVSRPPG
ASEIAHAAGFAVLTPDGRIAQAFNGVRFDASALRTAIERASAGKVGSPAQQLLMRCVHFDPLTGRYTVTILDGIRALFLG
AFAALAGWWLWQHRQRRRSS
>Mature_260_residues
MNLRWICVLTATCLTLYAQASPLALPDPPDMAFAPTLGKQVPLDLVFRDDDGTPVRLRELSAHRPVILVPGYYHCPNLCS
TVMDGVLESLAQAHLPRGAWRVVAFSIDSGETVAVAAAKKQSYGALVAASGGNLHMLTGDTAAVGTLMQAIGMRVSRPPG
ASEIAHAAGFAVLTPDGRIAQAFNGVRFDASALRTAIERASAGKVGSPAQQLLMRCVHFDPLTGRYTVTILDGIRALFLG
AFAALAGWWLWQHRQRRRSS

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27799; Mature: 27799

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRWICVLTATCLTLYAQASPLALPDPPDMAFAPTLGKQVPLDLVFRDDDGTPVRLREL
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEC
SAHRPVILVPGYYHCPNLCSTVMDGVLESLAQAHLPRGAWRVVAFSIDSGETVAVAAAKK
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEECC
QSYGALVAASGGNLHMLTGDTAAVGTLMQAIGMRVSRPPGASEIAHAAGFAVLTPDGRIA
CCCCEEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEEECCCCHHH
QAFNGVRFDASALRTAIERASAGKVGSPAQQLLMRCVHFDPLTGRYTVTILDGIRALFLG
HHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH
AFAALAGWWLWQHRQRRRSS
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLRWICVLTATCLTLYAQASPLALPDPPDMAFAPTLGKQVPLDLVFRDDDGTPVRLREL
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEC
SAHRPVILVPGYYHCPNLCSTVMDGVLESLAQAHLPRGAWRVVAFSIDSGETVAVAAAKK
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEECC
QSYGALVAASGGNLHMLTGDTAAVGTLMQAIGMRVSRPPGASEIAHAAGFAVLTPDGRIA
CCCCEEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEEECCCCHHH
QAFNGVRFDASALRTAIERASAGKVGSPAQQLLMRCVHFDPLTGRYTVTILDGIRALFLG
HHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH
AFAALAGWWLWQHRQRRRSS
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA