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The map label for this gene is ctaC [H]

Identifier: 73538263

GI number: 73538263

Start: 1094643

End: 1095593

Strand: Direct

Name: ctaC [H]

Synonym: Reut_B4435

Alternate gene names: 73538263

Gene position: 1094643-1095593 (Clockwise)

Preceding gene: 73538262

Following gene: 73538264

Centisome position: 40.15

GC content: 67.51

Gene sequence:

>951_bases
ATGAACAGCAGCTTCCATCTGTTTCCCGAGAGTGCGTCGCTGGCAGCCGGGCGCTACGACACCCTGATGCTGTCGCTCAC
CGCGCTGCTCTGTGTGGTCGCGCTCGCGGTGCTGGTGGCGATAGCAGGCTCGGTGATCCGCTACCACGAACACCGGCCGG
CGGACCGCAGCCATCCGCCGCTCGCGAACAAGCCGCTGGAAATTGCCTGGACCACCATCCCGCTGCTGGTCTTCCTGGGC
ATCTTCGCCTGGGCCGCGCATGACTACACGCTGCTCGCGCAAGAGACCGCGGGCGCGCTGCCCGTCACCGTGGTGGCACG
CCAGTGGATGTGGAAGCTCGAGCACGCCAACGGCAAGCGTGAAATCAACGAACTCCACGTCCCGCTGGGGCAGGCCGTGC
AACTGACGATGACCTCGCAGGACGTGATCCACAGCTTCTACGTGCCCGCGTTCCGGATCAAGCAGGACGTGGTGCCGGGC
CGCTACACCACGCTGCGCTTCACCGCGACGCATGCCGGCGTGTATCGGCTGTTCTGCGCGGAGTACTGCGGCACCGACCA
CGCCGCCATGCAGGGGCGCATCGTGGTGATGCCGCCCGCGGAGTTTGCGCGATGGCTGGACGCGGACGTGGGCCCTGAAA
CCACGGCGGCGCGCGGCCGCGCACTGTTCCGGCATTATGGCTGTGCCGCCTGCCACGACGCCGGCGCAACGGTGCAGGCA
CCGAGGCTGGACGGGCTCATGGGCCGCACGGTCACCCTGCAGGATGGACGCGCGGTGACCGCCGACGCGGCCTACGTACG
CGACGCGATCCTGATGCCGCACAAGGACATCGTCGCGGGCTATGCGCCCATCATGCCGACCTACCAGGGCCAGATCGACG
AGCAGGACATTCTCGCCATCATCGAATACCTGCGCAGCATGGGAGCCGCCGATGCGAGCACAAGCCGCTGA

Upstream 100 bases:

>100_bases
CCGTGACGATCCTCGACGGCATCCGGGCCTTGTTCCTTGGCGCGTTCGCCGCGCTGGCCGGCTGGTGGCTGTGGCAACAC
CGGCAGCGGCGGCGCTCATC

Downstream 100 bases:

>100_bases
ACGCGCCAGCACCGTGGCGCAGCCCGATTACCTGAGCGACGGCTTCTCGCTCGCCTCATGGCTGGGCTCGACGGACCACA
AGCGCATTGCGTGGCTGTAC

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNSSFHLFPESASLAAGRYDTLMLSLTALLCVVALAVLVAIAGSVIRYHEHRPADRSHPPLANKPLEIAWTTIPLLVFLG
IFAWAAHDYTLLAQETAGALPVTVVARQWMWKLEHANGKREINELHVPLGQAVQLTMTSQDVIHSFYVPAFRIKQDVVPG
RYTTLRFTATHAGVYRLFCAEYCGTDHAAMQGRIVVMPPAEFARWLDADVGPETTAARGRALFRHYGCAACHDAGATVQA
PRLDGLMGRTVTLQDGRAVTADAAYVRDAILMPHKDIVAGYAPIMPTYQGQIDEQDILAIIEYLRSMGAADASTSR

Sequences:

>Translated_316_residues
MNSSFHLFPESASLAAGRYDTLMLSLTALLCVVALAVLVAIAGSVIRYHEHRPADRSHPPLANKPLEIAWTTIPLLVFLG
IFAWAAHDYTLLAQETAGALPVTVVARQWMWKLEHANGKREINELHVPLGQAVQLTMTSQDVIHSFYVPAFRIKQDVVPG
RYTTLRFTATHAGVYRLFCAEYCGTDHAAMQGRIVVMPPAEFARWLDADVGPETTAARGRALFRHYGCAACHDAGATVQA
PRLDGLMGRTVTLQDGRAVTADAAYVRDAILMPHKDIVAGYAPIMPTYQGQIDEQDILAIIEYLRSMGAADASTSR
>Mature_316_residues
MNSSFHLFPESASLAAGRYDTLMLSLTALLCVVALAVLVAIAGSVIRYHEHRPADRSHPPLANKPLEIAWTTIPLLVFLG
IFAWAAHDYTLLAQETAGALPVTVVARQWMWKLEHANGKREINELHVPLGQAVQLTMTSQDVIHSFYVPAFRIKQDVVPG
RYTTLRFTATHAGVYRLFCAEYCGTDHAAMQGRIVVMPPAEFARWLDADVGPETTAARGRALFRHYGCAACHDAGATVQA
PRLDGLMGRTVTLQDGRAVTADAAYVRDAILMPHKDIVAGYAPIMPTYQGQIDEQDILAIIEYLRSMGAADASTSR

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=161, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1786635, Length=209, Percent_Identity=25.3588516746411, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 34581; Mature: 34581

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSFHLFPESASLAAGRYDTLMLSLTALLCVVALAVLVAIAGSVIRYHEHRPADRSHPP
CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LANKPLEIAWTTIPLLVFLGIFAWAAHDYTLLAQETAGALPVTVVARQWMWKLEHANGKR
CCCCCCEEHHHHHHHHHHHHHHHHHHCCEEEEEHHCCCCCHHHHHHHHHHHHHHCCCCHH
EINELHVPLGQAVQLTMTSQDVIHSFYVPAFRIKQDVVPGRYTTLRFTATHAGVYRLFCA
HHHHHCCCCCCEEEEEECHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHH
EYCGTDHAAMQGRIVVMPPAEFARWLDADVGPETTAARGRALFRHYGCAACHDAGATVQA
HHHCCCCHHHCCEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEC
PRLDGLMGRTVTLQDGRAVTADAAYVRDAILMPHKDIVAGYAPIMPTYQGQIDEQDILAI
CCCCCCCCCEEEECCCCEEECHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHH
IEYLRSMGAADASTSR
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNSSFHLFPESASLAAGRYDTLMLSLTALLCVVALAVLVAIAGSVIRYHEHRPADRSHPP
CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LANKPLEIAWTTIPLLVFLGIFAWAAHDYTLLAQETAGALPVTVVARQWMWKLEHANGKR
CCCCCCEEHHHHHHHHHHHHHHHHHHCCEEEEEHHCCCCCHHHHHHHHHHHHHHCCCCHH
EINELHVPLGQAVQLTMTSQDVIHSFYVPAFRIKQDVVPGRYTTLRFTATHAGVYRLFCA
HHHHHCCCCCCEEEEEECHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHH
EYCGTDHAAMQGRIVVMPPAEFARWLDADVGPETTAARGRALFRHYGCAACHDAGATVQA
HHHCCCCHHHCCEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEC
PRLDGLMGRTVTLQDGRAVTADAAYVRDAILMPHKDIVAGYAPIMPTYQGQIDEQDILAI
CCCCCCCCCEEEECCCCEEECHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHH
IEYLRSMGAADASTSR
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]