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The map label for this gene is flhC [H]

Identifier: 73538040

GI number: 73538040

Start: 850763

End: 851395

Strand: Reverse

Name: flhC [H]

Synonym: Reut_B4210

Alternate gene names: 73538040

Gene position: 851395-850763 (Counterclockwise)

Preceding gene: 73538041

Following gene: 73538039

Centisome position: 31.23

GC content: 66.35

Gene sequence:

>633_bases
ATGAAAACCACTGCGCAGACCGCACCGGCGCGCAGCGCGCTGCAGGATGCCAGCGATACCCAGCTTGCCATCGAACTAAT
CGGCCTCGGCGCGCGCCCGCAAGTCGTTGAGGCCGAGGTCACGCTGTCGCGCAGCCGCGTGTACCGGCTGTACCGCGAAT
TGACGGGAGGCTCCCCGCCCAAGGGCATGCTGCCGTTCTCCGCCGACTGGTTCGTGACGTGGCGGCCCAATGCGCACGCG
TCCTACCTGCTCAGCGTGCACGAGTACATGCAGCAGCGCGCGGGGTTGCCGGGCATTCGCGCCGTGCTGAACAGTTACCG
CGTCTATGCCGAACACATGAAGGCCAACAACGAGGAATGCCTGATCAGTTTCACTCGCTTCTGGACCCTGGTGCGGTTCT
GTGAAGGCGGGTTGCTGCAGCTGTCAACGTGCCCCTGCTGTGGCGGAAGATTCGTGACGCATGCCCACGAGCCGCTGGCA
TCCTTCATTTGCACGTTGTGTCAGCCACCGTCGCGGGTGCGGCGCAGCGTGCGCCGCGAGACGCCGCATGCCACCGCCAA
CGCGCCTGCGGCCGTCCTCGGCAACCGGCCGCCAGTCGCCATGCCGGGGTTCGGGATGGTGCCTGCGCTATGA

Upstream 100 bases:

>100_bases
GTGCGTTGCTCGAAGCGCTCGCGGGCATCCGGCCCCAGCACGAGCTGTGCAATATGCATACGGCCATCGTGTTGGCCGCA
CAGGCCCTGGAGGAAGGACG

Downstream 100 bases:

>100_bases
GGGCCGTTGTGCCACCGCGATCCCGCGCGCCTGGCAGTCACTCGATACACGCCCGGCAGCCTATGCCGCACAACTGACAC
CGGAGGCTCTATGTCAGGCA

Product: transcriptional activator FlhC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKTTAQTAPARSALQDASDTQLAIELIGLGARPQVVEAEVTLSRSRVYRLYRELTGGSPPKGMLPFSADWFVTWRPNAHA
SYLLSVHEYMQQRAGLPGIRAVLNSYRVYAEHMKANNEECLISFTRFWTLVRFCEGGLLQLSTCPCCGGRFVTHAHEPLA
SFICTLCQPPSRVRRSVRRETPHATANAPAAVLGNRPPVAMPGFGMVPAL

Sequences:

>Translated_210_residues
MKTTAQTAPARSALQDASDTQLAIELIGLGARPQVVEAEVTLSRSRVYRLYRELTGGSPPKGMLPFSADWFVTWRPNAHA
SYLLSVHEYMQQRAGLPGIRAVLNSYRVYAEHMKANNEECLISFTRFWTLVRFCEGGLLQLSTCPCCGGRFVTHAHEPLA
SFICTLCQPPSRVRRSVRRETPHATANAPAAVLGNRPPVAMPGFGMVPAL
>Mature_210_residues
MKTTAQTAPARSALQDASDTQLAIELIGLGARPQVVEAEVTLSRSRVYRLYRELTGGSPPKGMLPFSADWFVTWRPNAHA
SYLLSVHEYMQQRAGLPGIRAVLNSYRVYAEHMKANNEECLISFTRFWTLVRFCEGGLLQLSTCPCCGGRFVTHAHEPLA
SFICTLCQPPSRVRRSVRRETPHATANAPAAVLGNRPPVAMPGFGMVPAL

Specific function: Transcriptional activator. Together with flhD it acts as a compound sigma factor that activates class 2 flagellar genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flhC family [H]

Homologues:

Organism=Escherichia coli, GI1788201, Length=173, Percent_Identity=53.1791907514451, Blast_Score=198, Evalue=3e-52,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007944
- ProDom:   PD016592 [H]

Pfam domain/function: PF05280 FlhC [H]

EC number: NA

Molecular weight: Translated: 23112; Mature: 23112

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTAQTAPARSALQDASDTQLAIELIGLGARPQVVEAEVTLSRSRVYRLYRELTGGSPP
CCCCCCCCHHHHHHHCCCCHHEEHHEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCC
KGMLPFSADWFVTWRPNAHASYLLSVHEYMQQRAGLPGIRAVLNSYRVYAEHMKANNEEC
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHH
LISFTRFWTLVRFCEGGLLQLSTCPCCGGRFVTHAHEPLASFICTLCQPPSRVRRSVRRE
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
TPHATANAPAAVLGNRPPVAMPGFGMVPAL
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTTAQTAPARSALQDASDTQLAIELIGLGARPQVVEAEVTLSRSRVYRLYRELTGGSPP
CCCCCCCCHHHHHHHCCCCHHEEHHEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCC
KGMLPFSADWFVTWRPNAHASYLLSVHEYMQQRAGLPGIRAVLNSYRVYAEHMKANNEEC
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHH
LISFTRFWTLVRFCEGGLLQLSTCPCCGGRFVTHAHEPLASFICTLCQPPSRVRRSVRRE
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
TPHATANAPAAVLGNRPPVAMPGFGMVPAL
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]