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The map label for this gene is flhD [H]

Identifier: 73538041

GI number: 73538041

Start: 851392

End: 851709

Strand: Reverse

Name: flhD [H]

Synonym: Reut_B4211

Alternate gene names: 73538041

Gene position: 851709-851392 (Counterclockwise)

Preceding gene: 73538042

Following gene: 73538040

Centisome position: 31.24

GC content: 64.78

Gene sequence:

>318_bases
ATGGACAGCAATGACCTGGTACGTGAGATCAAGGACGTGAATCTGGCCTATCTGCTGCTGGTGCAGCGCCTGATGCGCCA
GAACGAGGCCGAGGCACTGTTCCGGCTCGGCATCGGCAAGGAAGTCGGCCACGCGTTGCGGGCGCTTTCGCCCGCGCAGA
TGCTGGCGCTGGCGCGCTCGAGCATGGTGCTGTGCCGGTTCCGGCTCGACAACGGTGCGTTGCTCGAAGCGCTCGCGGGC
ATCCGGCCCCAGCACGAGCTGTGCAATATGCATACGGCCATCGTGTTGGCCGCACAGGCCCTGGAGGAAGGACGATGA

Upstream 100 bases:

>100_bases
CGCACGTCGGCACCGGCATGGGCAACGCGGACCCAGCCCGCGACCGCCGCGATGCAGGCAGACAACCCGAAGATAAACCC
GTTTGCATGGGAGGCTGGCA

Downstream 100 bases:

>100_bases
AAACCACTGCGCAGACCGCACCGGCGCGCAGCGCGCTGCAGGATGCCAGCGATACCCAGCTTGCCATCGAACTAATCGGC
CTCGGCGCGCGCCCGCAAGT

Product: transcriptional activator FlhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MDSNDLVREIKDVNLAYLLLVQRLMRQNEAEALFRLGIGKEVGHALRALSPAQMLALARSSMVLCRFRLDNGALLEALAG
IRPQHELCNMHTAIVLAAQALEEGR

Sequences:

>Translated_105_residues
MDSNDLVREIKDVNLAYLLLVQRLMRQNEAEALFRLGIGKEVGHALRALSPAQMLALARSSMVLCRFRLDNGALLEALAG
IRPQHELCNMHTAIVLAAQALEEGR
>Mature_105_residues
MDSNDLVREIKDVNLAYLLLVQRLMRQNEAEALFRLGIGKEVGHALRALSPAQMLALARSSMVLCRFRLDNGALLEALAG
IRPQHELCNMHTAIVLAAQALEEGR

Specific function: Transcriptional activator. Involved in the regulation of a number of genetic systems [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FlhD family [H]

Homologues:

Organism=Escherichia coli, GI145693151, Length=103, Percent_Identity=38.8349514563107, Blast_Score=81, Evalue=1e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007911
- ProDom:   PD015582 [H]

Pfam domain/function: PF05247 FlhD [H]

EC number: NA

Molecular weight: Translated: 11635; Mature: 11635

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNDLVREIKDVNLAYLLLVQRLMRQNEAEALFRLGIGKEVGHALRALSPAQMLALARS
CCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH
SMVLCRFRLDNGALLEALAGIRPQHELCNMHTAIVLAAQALEEGR
HHHHHEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSNDLVREIKDVNLAYLLLVQRLMRQNEAEALFRLGIGKEVGHALRALSPAQMLALARS
CCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH
SMVLCRFRLDNGALLEALAGIRPQHELCNMHTAIVLAAQALEEGR
HHHHHEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA