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The map label for this gene is fdhD [H]

Identifier: 73537925

GI number: 73537925

Start: 737658

End: 738530

Strand: Direct

Name: fdhD [H]

Synonym: Reut_B4092

Alternate gene names: 73537925

Gene position: 737658-738530 (Clockwise)

Preceding gene: 73537924

Following gene: 73537926

Centisome position: 27.06

GC content: 64.83

Gene sequence:

>873_bases
ATGGAATGCACTGAACTCGTTGAACACCACGGCTATGCCGCACGCAGCATCGTCCGCCACAAGGGCGGCGCGGTGAAGCC
CGCCATGGACAACGTGGCGGAGGAGCTTCCCGTGGCCCTGGTGTACAACGGCATCTCGCATGCGGTGATGATGGCCACGC
CGCTGGATCTCGAAGCGTTTGCCGTGGGCTTCTCGCTGACCGAAGGCATCGTCAGCCACAACGCGCAGATCCATGACATC
GATGTGCGGGTCCACGCGCACAGCGCCGAAGTGCACCTCCAGATCAGCGAACAGGCCTTCGCCGCGATGAAGGCGCGCAA
GCGCGCGCTGGCCGGCCGCACGGGCTGTGGTGTCTGCGGCATCGAAAGCCTCGAACTGCTCGACCTCGAGCCCACGCCAA
TGCGGATGCCGGCAACGCGGTTGCAGCCGACGCCGGAAATGATCGGCCGCGTGGCAGCCGCGCTGCCTTCGCACCAGCGG
CTGATGTGTGAAACCGGCGGCGTCCACGCGGCGGCATGGTGCAATGCGCACGGGGAAATCCTGCACGTCTTCGAGGATGT
CGGCCGGCATAACGGCCTGGACAAGCTGATCGGCCATCTGGCGATGCAGCGCGTGAACATGAACGACGGCTTCGTCTTCC
TGTCGAGCCGCGCGAGCTATGAACTGGTGCGCAAGGCCGCGCGCATGAACATCCAGATGCTGGCGACCATTTCCGCGCCG
ACGTCGCTGGCCATCCGGATTGCGGCGCAGGCCGGCCTGCGCCTGCTTAGCTTTTGCCGGAAGGACGGCTATGTCGAATA
TACCGGCGCAGCATTCGATGACAGCTGCGGTCCTCAGGCCGAAGGTGTTCTCGAAGGAGCGGCAGCATGCTGA

Upstream 100 bases:

>100_bases
GCCGACGTCGAAGTCTGTGCCCGTGCTGCTGACGCCGTCGCGTGTCCAGGCTGCCGCTGCCTGACGTAGAAGTATCGCCT
CCTATCCTTGCGAGACCATC

Downstream 100 bases:

>100_bases
GCTTCGACGAGGCACAGGCAATCTTCGCCAATGCCGCAGAGCCGGTGCGCGAGACCGAAACCTTATGGCTGGGGCTGGCA
ACCGGCCGCGTGCTGGCCAG

Product: formate dehydrogenase subunit FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MECTELVEHHGYAARSIVRHKGGAVKPAMDNVAEELPVALVYNGISHAVMMATPLDLEAFAVGFSLTEGIVSHNAQIHDI
DVRVHAHSAEVHLQISEQAFAAMKARKRALAGRTGCGVCGIESLELLDLEPTPMRMPATRLQPTPEMIGRVAAALPSHQR
LMCETGGVHAAAWCNAHGEILHVFEDVGRHNGLDKLIGHLAMQRVNMNDGFVFLSSRASYELVRKAARMNIQMLATISAP
TSLAIRIAAQAGLRLLSFCRKDGYVEYTGAAFDDSCGPQAEGVLEGAAAC

Sequences:

>Translated_290_residues
MECTELVEHHGYAARSIVRHKGGAVKPAMDNVAEELPVALVYNGISHAVMMATPLDLEAFAVGFSLTEGIVSHNAQIHDI
DVRVHAHSAEVHLQISEQAFAAMKARKRALAGRTGCGVCGIESLELLDLEPTPMRMPATRLQPTPEMIGRVAAALPSHQR
LMCETGGVHAAAWCNAHGEILHVFEDVGRHNGLDKLIGHLAMQRVNMNDGFVFLSSRASYELVRKAARMNIQMLATISAP
TSLAIRIAAQAGLRLLSFCRKDGYVEYTGAAFDDSCGPQAEGVLEGAAAC
>Mature_290_residues
MECTELVEHHGYAARSIVRHKGGAVKPAMDNVAEELPVALVYNGISHAVMMATPLDLEAFAVGFSLTEGIVSHNAQIHDI
DVRVHAHSAEVHLQISEQAFAAMKARKRALAGRTGCGVCGIESLELLDLEPTPMRMPATRLQPTPEMIGRVAAALPSHQR
LMCETGGVHAAAWCNAHGEILHVFEDVGRHNGLDKLIGHLAMQRVNMNDGFVFLSSRASYELVRKAARMNIQMLATISAP
TSLAIRIAAQAGLRLLSFCRKDGYVEYTGAAFDDSCGPQAEGVLEGAAAC

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=243, Percent_Identity=44.4444444444444, Blast_Score=197, Evalue=9e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31141; Mature: 31141

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECTELVEHHGYAARSIVRHKGGAVKPAMDNVAEELPVALVYNGISHAVMMATPLDLEAF
CCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCHHCEEEEECCCCHHHH
AVGFSLTEGIVSHNAQIHDIDVRVHAHSAEVHLQISEQAFAAMKARKRALAGRTGCGVCG
HHHHHHHHHHHHCCCEEEEEEEEEEEECEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
IESLELLDLEPTPMRMPATRLQPTPEMIGRVAAALPSHQRLMCETGGVHAAAWCNAHGEI
CCCEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCHH
LHVFEDVGRHNGLDKLIGHLAMQRVNMNDGFVFLSSRASYELVRKAARMNIQMLATISAP
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEECCC
TSLAIRIAAQAGLRLLSFCRKDGYVEYTGAAFDDSCGPQAEGVLEGAAAC
CHHEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MECTELVEHHGYAARSIVRHKGGAVKPAMDNVAEELPVALVYNGISHAVMMATPLDLEAF
CCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCHHCEEEEECCCCHHHH
AVGFSLTEGIVSHNAQIHDIDVRVHAHSAEVHLQISEQAFAAMKARKRALAGRTGCGVCG
HHHHHHHHHHHHCCCEEEEEEEEEEEECEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
IESLELLDLEPTPMRMPATRLQPTPEMIGRVAAALPSHQRLMCETGGVHAAAWCNAHGEI
CCCEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCHH
LHVFEDVGRHNGLDKLIGHLAMQRVNMNDGFVFLSSRASYELVRKAARMNIQMLATISAP
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEECCC
TSLAIRIAAQAGLRLLSFCRKDGYVEYTGAAFDDSCGPQAEGVLEGAAAC
CHHEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA