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The map label for this gene is ydeP [H]

Identifier: 73537924

GI number: 73537924

Start: 735297

End: 737621

Strand: Direct

Name: ydeP [H]

Synonym: Reut_B4091

Alternate gene names: 73537924

Gene position: 735297-737621 (Clockwise)

Preceding gene: 73537917

Following gene: 73537925

Centisome position: 26.97

GC content: 64.65

Gene sequence:

>2325_bases
ATGAGCTCGCCGAAGCCCGAGAAAGGCCACATCGCCCCCTACACCCATCCCGCCGCCGGCTGGGGTGCGCTGAAGTACGT
TGCCATCAACCTCGTCAAGGAGCAGGTTGCCGGTGGCAAGTACAAGATGCTGTTCAAGCAGAACCAGGCCGATGGCTTCG
ACTGCCCCGGCTGCGCATGGCCCGATCGACAGCACGCTTCGACCTTCGAGTTCTGCGAGAACGGAGTCAAGGCCGTCGCC
GCGGAAGCGACCAGCATGCGTGTCACGCCCGAGTTTTTCGCGCAGCATACGGTCACGTCGCTGCTCGAACAGACCGATTA
CGAGCTGGAGCAGCACGGCCGCCTCACGCACCCGATGGTGTACGACGCGCAGACCGACAAGTACCGCGCCATTGCGTGGG
ACGAAGCGTTTGCACTGATCGGTCGCCACCTGCGCGCATTGCCGGACCCGAACCAGGCAGCGTTCTATACATCGGGCCGT
GCCAGCAACGAGGCAGCGTTCCTGTACCAGTTGTTCGTGCGCGCCTACGGCACCAACAATTTCCCGGACTGCTCGAACAT
GTGCCACGAGGCCACAAGCCGTGGCCTGCCCAAGACCATTGGCGTAGGCAAGGCAACGGTGGTGCTCGACGACTTCGAGC
ATGCCGACACCATCCTGCTGTTCGGCCACAACGCTGCCACCAACCACCCCCGCATGCTCGGCGAGCTGCGCGAGTGCGCA
CGGCGCGGCGCGACCATTGTGTCGATCAATCCGCTGCGCGAACGCGGCCTGGAGCGCTTTACCAGCCCGCAGCATCCAGT
CGAAATGCTCACCGGCTCCAGCACCAAGATAGCGTCGATGTTCGTGCAGCCGAAGCTCGGCGGGGATTTCGCGCTGATCA
AGGGCATGGCCAAGCGGCTGGTCGAACTCGACGACGAAGCGATCCGGCACGGCCAGGCGCGACTGATCGACGTCGACTTC
GTGCGCGAGCACACGATCGGCTTCGGTGCCTTCGTCGAGGACCTGCGCGTGGAGAGCTGGGCCGATATTGTCGCGGAATC
AGGCGTCCCGCTGCCGGACATCGATGCGCTGGCCCGTGTCTATGCGCGCGGCCAGCGCGTGATTGCGTGCTGGGGCATGG
GCCTGACGCAACACAAGCATTCGGTGCCGACCGTGCAGATCCTGTCGAACCTGATGATGATGCGCGGCAACATCGGCCGG
GCCGGGGCCGGCCTGCTGCCGGTGCGCGGGCATTCGAATGTGCAGGGCGATCGCACCGTCGGCATCGAGGAAAAGCCGGA
CGATGCGTTCCTGGACCGCCTCAAGGCTGCCTTCGGCTTCGAGCCGCCGCGCGACCATGGCTATGACGTGGTGGAAACCA
TCGAGGCGATGCTGGAGGGCAAGGTGAAAGTCTTCATCGGCCTGGGCGGCAACTTCTCGACGGCTACTCCCGATACGCCG
CGTACGCACGAAGGCCTGCGCCAGTGTGCATTGACTGTGAACATTGCCACCAAGCTCAACCGTAGCCACCTGATACACGG
CAAGGAATCGCTGATCCTGCCGACGCTGGGCCGCACGGAGATTGATGAACAGGACGGCGTGGCACAGGGCGTGACCGTCG
AGGATTCGGTCTGCATGGTGCATATCTCGTTCGGCATGAACAAGCCGGCGTCGCCGCACCTGCTGTCCGAGACCGCCATC
GTTGCGCGCATGGCCGCGGCGACGCTGGGCTCGGAGAAGATCGACTGGCTCTGGTACGTGCAGGACTATGCGCGCATCCG
CGATGCGATCGAGATGGTGATCGACGGCTTTGACAACTACAACGAACGCGTTGCCGTGCCAGGCGGCTTCCACCTGACGC
CTGCCGCGTGCAACCGCGAGTGGCACACGCCGTCGGGCAAGGCGCAGTTCCTCGTCCATGCGATCGACAAGGACACCCCG
ATCCACCGCGCGCGCGAGCAGTACGGCGACAAGCTGCTGGTGCTGATGACCACGCGCTCGCACGACCAGTACAACACGAC
AATCTATGGCCTCGACGACCGCTACCGCGGGGTGTTCGGGCTGCGCCGCGTGGTGTTCATCAGCGCGGCCGACCTGGCGC
GGCTGGGACTCTCGGCCGGGCAGCGTGTCGATATCACGAGCGTCTGGGACGACGGCGTGCAACGCCGGGTACAGGACTTC
GAACTGGTTCAGTACGACATTCCCGAAGGTTGCGTCGGTGCGTACTACCCCGAGACCAATCCGCTGGTGCCGCTCGAAAG
CATCGGCGATGGCTGCGGCACGCCGACGTCGAAGTCTGTGCCCGTGCTGCTGACGCCGTCGCGTGTCCAGGCTGCCGCTG
CCTGA

Upstream 100 bases:

>100_bases
CGCACCGCAGGGCGCGCGCCGAACCTACTCTGACGCTACAGGATCTGGCCAAACCGATTGACAGGCCAGTCACCGCCCCC
CGCCAGACAGGACACACGCC

Downstream 100 bases:

>100_bases
CGTAGAAGTATCGCCTCCTATCCTTGCGAGACCATCATGGAATGCACTGAACTCGTTGAACACCACGGCTATGCCGCACG
CAGCATCGTCCGCCACAAGG

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 773

Protein sequence:

>774_residues
MSSPKPEKGHIAPYTHPAAGWGALKYVAINLVKEQVAGGKYKMLFKQNQADGFDCPGCAWPDRQHASTFEFCENGVKAVA
AEATSMRVTPEFFAQHTVTSLLEQTDYELEQHGRLTHPMVYDAQTDKYRAIAWDEAFALIGRHLRALPDPNQAAFYTSGR
ASNEAAFLYQLFVRAYGTNNFPDCSNMCHEATSRGLPKTIGVGKATVVLDDFEHADTILLFGHNAATNHPRMLGELRECA
RRGATIVSINPLRERGLERFTSPQHPVEMLTGSSTKIASMFVQPKLGGDFALIKGMAKRLVELDDEAIRHGQARLIDVDF
VREHTIGFGAFVEDLRVESWADIVAESGVPLPDIDALARVYARGQRVIACWGMGLTQHKHSVPTVQILSNLMMMRGNIGR
AGAGLLPVRGHSNVQGDRTVGIEEKPDDAFLDRLKAAFGFEPPRDHGYDVVETIEAMLEGKVKVFIGLGGNFSTATPDTP
RTHEGLRQCALTVNIATKLNRSHLIHGKESLILPTLGRTEIDEQDGVAQGVTVEDSVCMVHISFGMNKPASPHLLSETAI
VARMAAATLGSEKIDWLWYVQDYARIRDAIEMVIDGFDNYNERVAVPGGFHLTPAACNREWHTPSGKAQFLVHAIDKDTP
IHRAREQYGDKLLVLMTTRSHDQYNTTIYGLDDRYRGVFGLRRVVFISAADLARLGLSAGQRVDITSVWDDGVQRRVQDF
ELVQYDIPEGCVGAYYPETNPLVPLESIGDGCGTPTSKSVPVLLTPSRVQAAAA

Sequences:

>Translated_774_residues
MSSPKPEKGHIAPYTHPAAGWGALKYVAINLVKEQVAGGKYKMLFKQNQADGFDCPGCAWPDRQHASTFEFCENGVKAVA
AEATSMRVTPEFFAQHTVTSLLEQTDYELEQHGRLTHPMVYDAQTDKYRAIAWDEAFALIGRHLRALPDPNQAAFYTSGR
ASNEAAFLYQLFVRAYGTNNFPDCSNMCHEATSRGLPKTIGVGKATVVLDDFEHADTILLFGHNAATNHPRMLGELRECA
RRGATIVSINPLRERGLERFTSPQHPVEMLTGSSTKIASMFVQPKLGGDFALIKGMAKRLVELDDEAIRHGQARLIDVDF
VREHTIGFGAFVEDLRVESWADIVAESGVPLPDIDALARVYARGQRVIACWGMGLTQHKHSVPTVQILSNLMMMRGNIGR
AGAGLLPVRGHSNVQGDRTVGIEEKPDDAFLDRLKAAFGFEPPRDHGYDVVETIEAMLEGKVKVFIGLGGNFSTATPDTP
RTHEGLRQCALTVNIATKLNRSHLIHGKESLILPTLGRTEIDEQDGVAQGVTVEDSVCMVHISFGMNKPASPHLLSETAI
VARMAAATLGSEKIDWLWYVQDYARIRDAIEMVIDGFDNYNERVAVPGGFHLTPAACNREWHTPSGKAQFLVHAIDKDTP
IHRAREQYGDKLLVLMTTRSHDQYNTTIYGLDDRYRGVFGLRRVVFISAADLARLGLSAGQRVDITSVWDDGVQRRVQDF
ELVQYDIPEGCVGAYYPETNPLVPLESIGDGCGTPTSKSVPVLLTPSRVQAAAA
>Mature_773_residues
SSPKPEKGHIAPYTHPAAGWGALKYVAINLVKEQVAGGKYKMLFKQNQADGFDCPGCAWPDRQHASTFEFCENGVKAVAA
EATSMRVTPEFFAQHTVTSLLEQTDYELEQHGRLTHPMVYDAQTDKYRAIAWDEAFALIGRHLRALPDPNQAAFYTSGRA
SNEAAFLYQLFVRAYGTNNFPDCSNMCHEATSRGLPKTIGVGKATVVLDDFEHADTILLFGHNAATNHPRMLGELRECAR
RGATIVSINPLRERGLERFTSPQHPVEMLTGSSTKIASMFVQPKLGGDFALIKGMAKRLVELDDEAIRHGQARLIDVDFV
REHTIGFGAFVEDLRVESWADIVAESGVPLPDIDALARVYARGQRVIACWGMGLTQHKHSVPTVQILSNLMMMRGNIGRA
GAGLLPVRGHSNVQGDRTVGIEEKPDDAFLDRLKAAFGFEPPRDHGYDVVETIEAMLEGKVKVFIGLGGNFSTATPDTPR
THEGLRQCALTVNIATKLNRSHLIHGKESLILPTLGRTEIDEQDGVAQGVTVEDSVCMVHISFGMNKPASPHLLSETAIV
ARMAAATLGSEKIDWLWYVQDYARIRDAIEMVIDGFDNYNERVAVPGGFHLTPAACNREWHTPSGKAQFLVHAIDKDTPI
HRAREQYGDKLLVLMTTRSHDQYNTTIYGLDDRYRGVFGLRRVVFISAADLARLGLSAGQRVDITSVWDDGVQRRVQDFE
LVQYDIPEGCVGAYYPETNPLVPLESIGDGCGTPTSKSVPVLLTPSRVQAAAA

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=762, Percent_Identity=50, Blast_Score=756, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=374, Percent_Identity=30.2139037433155, Blast_Score=152, Evalue=6e-38,
Organism=Escherichia coli, GI3868719, Length=531, Percent_Identity=22.0338983050847, Blast_Score=100, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 85172; Mature: 85040

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPKPEKGHIAPYTHPAAGWGALKYVAINLVKEQVAGGKYKMLFKQNQADGFDCPGCAW
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC
PDRQHASTFEFCENGVKAVAAEATSMRVTPEFFAQHTVTSLLEQTDYELEQHGRLTHPMV
CCCCCCHHHHHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEE
YDAQTDKYRAIAWDEAFALIGRHLRALPDPNQAAFYTSGRASNEAAFLYQLFVRAYGTNN
ECCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC
FPDCSNMCHEATSRGLPKTIGVGKATVVLDDFEHADTILLFGHNAATNHPRMLGELRECA
CCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHH
RRGATIVSINPLRERGLERFTSPQHPVEMLTGSSTKIASMFVQPKLGGDFALIKGMAKRL
HCCCEEEEECHHHHHHHHHHCCCCCCHHHHCCCCCEEEHEEECCCCCCCHHHHHHHHHHH
VELDDEAIRHGQARLIDVDFVREHTIGFGAFVEDLRVESWADIVAESGVPLPDIDALARV
HHCCHHHHHCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
YARGQRVIACWGMGLTQHKHSVPTVQILSNLMMMRGNIGRAGAGLLPVRGHSNVQGDRTV
HHCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEE
GIEEKPDDAFLDRLKAAFGFEPPRDHGYDVVETIEAMLEGKVKVFIGLGGNFSTATPDTP
CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
RTHEGLRQCALTVNIATKLNRSHLIHGKESLILPTLGRTEIDEQDGVAQGVTVEDSVCMV
CHHHHHHHHEEEEEHHHHCCCHHEECCCCCEEEECCCCCCCCCCCCCCCCCEEECCEEEE
HISFGMNKPASPHLLSETAIVARMAAATLGSEKIDWLWYVQDYARIRDAIEMVIDGFDNY
EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCC
NERVAVPGGFHLTPAACNREWHTPSGKAQFLVHAIDKDTPIHRAREQYGDKLLVLMTTRS
CCEEECCCCCEECHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCEEEEEEEECC
HDQYNTTIYGLDDRYRGVFGLRRVVFISAADLARLGLSAGQRVDITSVWDDGVQRRVQDF
CCCCCCEEEECCHHHHHHHHHHHHHEEEHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
ELVQYDIPEGCVGAYYPETNPLVPLESIGDGCGTPTSKSVPVLLTPSRVQAAAA
HEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECCHHHHHCCC
>Mature Secondary Structure 
SSPKPEKGHIAPYTHPAAGWGALKYVAINLVKEQVAGGKYKMLFKQNQADGFDCPGCAW
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC
PDRQHASTFEFCENGVKAVAAEATSMRVTPEFFAQHTVTSLLEQTDYELEQHGRLTHPMV
CCCCCCHHHHHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEE
YDAQTDKYRAIAWDEAFALIGRHLRALPDPNQAAFYTSGRASNEAAFLYQLFVRAYGTNN
ECCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC
FPDCSNMCHEATSRGLPKTIGVGKATVVLDDFEHADTILLFGHNAATNHPRMLGELRECA
CCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHH
RRGATIVSINPLRERGLERFTSPQHPVEMLTGSSTKIASMFVQPKLGGDFALIKGMAKRL
HCCCEEEEECHHHHHHHHHHCCCCCCHHHHCCCCCEEEHEEECCCCCCCHHHHHHHHHHH
VELDDEAIRHGQARLIDVDFVREHTIGFGAFVEDLRVESWADIVAESGVPLPDIDALARV
HHCCHHHHHCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
YARGQRVIACWGMGLTQHKHSVPTVQILSNLMMMRGNIGRAGAGLLPVRGHSNVQGDRTV
HHCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEE
GIEEKPDDAFLDRLKAAFGFEPPRDHGYDVVETIEAMLEGKVKVFIGLGGNFSTATPDTP
CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
RTHEGLRQCALTVNIATKLNRSHLIHGKESLILPTLGRTEIDEQDGVAQGVTVEDSVCMV
CHHHHHHHHEEEEEHHHHCCCHHEECCCCCEEEECCCCCCCCCCCCCCCCCEEECCEEEE
HISFGMNKPASPHLLSETAIVARMAAATLGSEKIDWLWYVQDYARIRDAIEMVIDGFDNY
EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCC
NERVAVPGGFHLTPAACNREWHTPSGKAQFLVHAIDKDTPIHRAREQYGDKLLVLMTTRS
CCEEECCCCCEECHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCEEEEEEEECC
HDQYNTTIYGLDDRYRGVFGLRRVVFISAADLARLGLSAGQRVDITSVWDDGVQRRVQDF
CCCCCCEEEECCHHHHHHHHHHHHHEEEHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
ELVQYDIPEGCVGAYYPETNPLVPLESIGDGCGTPTSKSVPVLLTPSRVQAAAA
HEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]