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The map label for this gene is arnB [H]

Identifier: 73537810

GI number: 73537810

Start: 614597

End: 615772

Strand: Reverse

Name: arnB [H]

Synonym: Reut_B3977

Alternate gene names: 73537810

Gene position: 615772-614597 (Counterclockwise)

Preceding gene: 73537811

Following gene: 73537809

Centisome position: 22.59

GC content: 66.24

Gene sequence:

>1176_bases
ATGACCGCTACCGCCGCTTCCGAATTCCTTCCCTTCGTCCGGCCCGAGATCGACGCGGACACCATTGCCGAAGTCGGCAA
GGTGCTGGCATCCGGCTGGATCACCTCCGGCCCGAAGATGCAGGCGTTCGAGGACGCCCTGTCCCAGCTCTTTGGCGGAC
GCCCCGTGCGCACCTTCGCCAATGGCTCGGCCACGATGGAAATCGCGCTGCGGATCGCGGACATCGGCCCCGGCGATGAA
GTCATCACCACGCCGATCACGTGGGTCGCCACCGCGAACGTGGTGCTCGCCGTGGGCGCGAAGCCCGTGTTCGTCGACAT
CGACCCGCGCACGCGCAATATCGACCTCGACGCCGTGGAAGCGGCCATCACGCCGCGTACGCGCGCCATCATGCCGGTGT
ACCTGTCTGGCCTGCCGGTCGACATGGACCGCCTCTATGCGATCGCCACCAAATACAATCTGCGCGTGATCGAAGATGCC
GCGCAGGCCATCGATTCGCGCTGGCAAGGCAAGCGCATCGGCGCCTTTGGCGACCTGGTCAGCTTCAGCTTCCAGGCCAA
CAAGAACATCACCAGCGTCGAGGGCGGCTGCCTGGTGATGAACACGCCGGAAGAAGCCGTGCGCGCCGAACGCCTGCGCC
TGCAGGGCGTGATCCGCTCGGGCATGGACGGCATGGACGTCGAAGAGCCCGGTGGCAAGTTCAACCTGACCGACGTGAAT
GCCGCGATCGGCCTCGCGCAGCTCGCAAAGCTCGACGCCATCACCGCGCGCCGCGCCGCACTGGCCGAGACCTATTTCCG
ATGCGCCGCCGACGCGGGGCTGGCCGAACTCGGCATTGAACTGCCCCAGCCGCTGGACCCGCAGCAAGCCACGACCAACT
GGCACATGTTCCAGGTCGTGCTGCCCACGGAGCGCCTCGAAGGCGGCCCGCAGCAGGCTCGCCAGAACGTGATGCAGGCC
ATGCGCGAGCGCGGCATCGGCACCGGCGTGCACTATCCCCCGATTCACCTTTTCACCTACTACCGTTCCCTTGGCTGGCG
CGCTGGCATGCTGCCGCACGCCGAACGCATCGGTCGCGGCATCGTCACGCTGCCGCTGTTCCCCGCCATGCAAGCCGCCG
ATGTGGAACGGGTCTGCGCAACTCTCAGCGAAACATGCAAACGTCTCTCCAAATGA

Upstream 100 bases:

>100_bases
CGCGTGTTCGGCATCCTGCTGATCCTGGCCGGCGTGTTCCTGATCGCGCGCTCGTGATCCGGCGCCCCTTTATGCTGCAT
ACCTACTGGCAAGCTACCCG

Downstream 100 bases:

>100_bases
GCCCGGTCGAGGTTTCGGTCGTCATTCCGGTCTACAACGAAGAAGACGGGCTGCAAGCCCTGTTCGATCGTCTGTATCCG
GCGCTCGATGGCCTTGGTGA

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTATAASEFLPFVRPEIDADTIAEVGKVLASGWITSGPKMQAFEDALSQLFGGRPVRTFANGSATMEIALRIADIGPGDE
VITTPITWVATANVVLAVGAKPVFVDIDPRTRNIDLDAVEAAITPRTRAIMPVYLSGLPVDMDRLYAIATKYNLRVIEDA
AQAIDSRWQGKRIGAFGDLVSFSFQANKNITSVEGGCLVMNTPEEAVRAERLRLQGVIRSGMDGMDVEEPGGKFNLTDVN
AAIGLAQLAKLDAITARRAALAETYFRCAADAGLAELGIELPQPLDPQQATTNWHMFQVVLPTERLEGGPQQARQNVMQA
MRERGIGTGVHYPPIHLFTYYRSLGWRAGMLPHAERIGRGIVTLPLFPAMQAADVERVCATLSETCKRLSK

Sequences:

>Translated_391_residues
MTATAASEFLPFVRPEIDADTIAEVGKVLASGWITSGPKMQAFEDALSQLFGGRPVRTFANGSATMEIALRIADIGPGDE
VITTPITWVATANVVLAVGAKPVFVDIDPRTRNIDLDAVEAAITPRTRAIMPVYLSGLPVDMDRLYAIATKYNLRVIEDA
AQAIDSRWQGKRIGAFGDLVSFSFQANKNITSVEGGCLVMNTPEEAVRAERLRLQGVIRSGMDGMDVEEPGGKFNLTDVN
AAIGLAQLAKLDAITARRAALAETYFRCAADAGLAELGIELPQPLDPQQATTNWHMFQVVLPTERLEGGPQQARQNVMQA
MRERGIGTGVHYPPIHLFTYYRSLGWRAGMLPHAERIGRGIVTLPLFPAMQAADVERVCATLSETCKRLSK
>Mature_390_residues
TATAASEFLPFVRPEIDADTIAEVGKVLASGWITSGPKMQAFEDALSQLFGGRPVRTFANGSATMEIALRIADIGPGDEV
ITTPITWVATANVVLAVGAKPVFVDIDPRTRNIDLDAVEAAITPRTRAIMPVYLSGLPVDMDRLYAIATKYNLRVIEDAA
QAIDSRWQGKRIGAFGDLVSFSFQANKNITSVEGGCLVMNTPEEAVRAERLRLQGVIRSGMDGMDVEEPGGKFNLTDVNA
AIGLAQLAKLDAITARRAALAETYFRCAADAGLAELGIELPQPLDPQQATTNWHMFQVVLPTERLEGGPQQARQNVMQAM
RERGIGTGVHYPPIHLFTYYRSLGWRAGMLPHAERIGRGIVTLPLFPAMQAADVERVCATLSETCKRLSK

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=389, Percent_Identity=40.8740359897172, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI2367285, Length=381, Percent_Identity=34.1207349081365, Blast_Score=178, Evalue=5e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 42393; Mature: 42262

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATAASEFLPFVRPEIDADTIAEVGKVLASGWITSGPKMQAFEDALSQLFGGRPVRTFA
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEC
NGSATMEIALRIADIGPGDEVITTPITWVATANVVLAVGAKPVFVDIDPRTRNIDLDAVE
CCCEEEEEEEEEECCCCCCCEEECCCCEEEECCEEEEECCCEEEEEECCCCCCCCHHHHH
AAITPRTRAIMPVYLSGLPVDMDRLYAIATKYNLRVIEDAAQAIDSRWQGKRIGAFGDLV
HHCCCCCCEEEEHEECCCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHCCCCCCCCHHHHH
SFSFQANKNITSVEGGCLVMNTPEEAVRAERLRLQGVIRSGMDGMDVEEPGGKFNLTDVN
EEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHH
AAIGLAQLAKLDAITARRAALAETYFRCAADAGLAELGIELPQPLDPQQATTNWHMFQVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEEE
LPTERLEGGPQQARQNVMQAMRERGIGTGVHYPPIHLFTYYRSLGWRAGMLPHAERIGRG
ECHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCC
IVTLPLFPAMQAADVERVCATLSETCKRLSK
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TATAASEFLPFVRPEIDADTIAEVGKVLASGWITSGPKMQAFEDALSQLFGGRPVRTFA
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEC
NGSATMEIALRIADIGPGDEVITTPITWVATANVVLAVGAKPVFVDIDPRTRNIDLDAVE
CCCEEEEEEEEEECCCCCCCEEECCCCEEEECCEEEEECCCEEEEEECCCCCCCCHHHHH
AAITPRTRAIMPVYLSGLPVDMDRLYAIATKYNLRVIEDAAQAIDSRWQGKRIGAFGDLV
HHCCCCCCEEEEHEECCCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHCCCCCCCCHHHHH
SFSFQANKNITSVEGGCLVMNTPEEAVRAERLRLQGVIRSGMDGMDVEEPGGKFNLTDVN
EEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHH
AAIGLAQLAKLDAITARRAALAETYFRCAADAGLAELGIELPQPLDPQQATTNWHMFQVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEEE
LPTERLEGGPQQARQNVMQAMRERGIGTGVHYPPIHLFTYYRSLGWRAGMLPHAERIGRG
ECHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCC
IVTLPLFPAMQAADVERVCATLSETCKRLSK
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA