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The map label for this gene is arnC [H]

Identifier: 73537809

GI number: 73537809

Start: 613641

End: 614618

Strand: Reverse

Name: arnC [H]

Synonym: Reut_B3976

Alternate gene names: 73537809

Gene position: 614618-613641 (Counterclockwise)

Preceding gene: 73537810

Following gene: 73537808

Centisome position: 22.55

GC content: 62.68

Gene sequence:

>978_bases
ATGCAAACGTCTCTCCAAATGAGCCCGGTCGAGGTTTCGGTCGTCATTCCGGTCTACAACGAAGAAGACGGGCTGCAAGC
CCTGTTCGATCGTCTGTATCCGGCGCTCGATGGCCTTGGTGACTCGTACGAGGTCATTTTCATCAATGACGGCAGCGTCG
ACCGCTCGGCGGCCATGCTCGCCGCGCAGTTCCACAAGCGCCCGGACGTGACCCGGGTGGTGCTGTTCAACGGCAATTTC
GGCCAGCACATGGCCATCCTGGCCGGCTTCGAGCACACGCGCGGCAAGATCGTGATCACGCTGGACGCAGACCTGCAGAA
CCCACCCGAGGAAATCCCGCGTCTCGTGCAGACCATGCGCGAAGGCCATGACTACGTCGGCACGATCCGCCGCCAGCGCA
ACGACACGGCGTTTCGCCGCTATGCGTCGCGCGCCATGAATGGCCTGCGCGAGCGGATCACGAAGATCCGCATGACGGAC
CAGGGCTGCATGCTGCGCGCGTATGACCGCAATGTGGTCGACACGATCAACGCCTGCCGCGAGGTCAACACGTTCATTCC
CGCGCTGGCCTACACGTTTGCGTCGAGCCCGGTGGAAATCGAAGTCGGCCACGAGCAGCGTCATGCCGGCGAGTCGAAGT
ACTCGCTGTACCAGCTCATCCGCCTGAACTTCGACCTGGTGACCGGTTTCTCGATCGTTCCGCTGCAATGGTTCTCGGCC
ATCGGTACGGTACTGTCGCTGTTGTCCGGCGTGCTGTTCGTGGTGCTGCTGATGCGCCGGTTCCTGTTCGGCTCGGAAGT
GCAGGGTGTGTTCACCCTGTTCGCCATGAACTTCTTCCTGATCGGCATCCTGCTGTTCGGCCTGGGCCTGCTCGGCGAAT
ACGTGGGCCGCATCTACCAGGAAGTGCGCGACCGGCCGCGCTACCGTATCAAGGCCGTCCTTGAGGCGGAGCCTTCCCGC
CACCGGACGGAGGCATGA

Upstream 100 bases:

>100_bases
CGCACGCCGAACGCATCGGTCGCGGCATCGTCACGCTGCCGCTGTTCCCCGCCATGCAAGCCGCCGATGTGGAACGGGTC
TGCGCAACTCTCAGCGAAAC

Downstream 100 bases:

>100_bases
TGCGCGCAGTCGTCTTTGGCTACCACAACGTCGGCGACCGCTGCCTGCGCGTGCTGCACGCGCGCGGCGTCGATGTGGCG
CTGGTCGTCACGCACCGTGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MQTSLQMSPVEVSVVIPVYNEEDGLQALFDRLYPALDGLGDSYEVIFINDGSVDRSAAMLAAQFHKRPDVTRVVLFNGNF
GQHMAILAGFEHTRGKIVITLDADLQNPPEEIPRLVQTMREGHDYVGTIRRQRNDTAFRRYASRAMNGLRERITKIRMTD
QGCMLRAYDRNVVDTINACREVNTFIPALAYTFASSPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSA
IGTVLSLLSGVLFVVLLMRRFLFGSEVQGVFTLFAMNFFLIGILLFGLGLLGEYVGRIYQEVRDRPRYRIKAVLEAEPSR
HRTEA

Sequences:

>Translated_325_residues
MQTSLQMSPVEVSVVIPVYNEEDGLQALFDRLYPALDGLGDSYEVIFINDGSVDRSAAMLAAQFHKRPDVTRVVLFNGNF
GQHMAILAGFEHTRGKIVITLDADLQNPPEEIPRLVQTMREGHDYVGTIRRQRNDTAFRRYASRAMNGLRERITKIRMTD
QGCMLRAYDRNVVDTINACREVNTFIPALAYTFASSPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSA
IGTVLSLLSGVLFVVLLMRRFLFGSEVQGVFTLFAMNFFLIGILLFGLGLLGEYVGRIYQEVRDRPRYRIKAVLEAEPSR
HRTEA
>Mature_325_residues
MQTSLQMSPVEVSVVIPVYNEEDGLQALFDRLYPALDGLGDSYEVIFINDGSVDRSAAMLAAQFHKRPDVTRVVLFNGNF
GQHMAILAGFEHTRGKIVITLDADLQNPPEEIPRLVQTMREGHDYVGTIRRQRNDTAFRRYASRAMNGLRERITKIRMTD
QGCMLRAYDRNVVDTINACREVNTFIPALAYTFASSPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSA
IGTVLSLLSGVLFVVLLMRRFLFGSEVQGVFTLFAMNFFLIGILLFGLGLLGEYVGRIYQEVRDRPRYRIKAVLEAEPSR
HRTEA

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=236, Percent_Identity=27.5423728813559, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1788588, Length=323, Percent_Identity=48.297213622291, Blast_Score=299, Evalue=2e-82,
Organism=Escherichia coli, GI1788692, Length=305, Percent_Identity=30.8196721311475, Blast_Score=163, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6325441, Length=121, Percent_Identity=32.2314049586777, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24585265, Length=178, Percent_Identity=28.6516853932584, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36864; Mature: 36864

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTSLQMSPVEVSVVIPVYNEEDGLQALFDRLYPALDGLGDSYEVIFINDGSVDRSAAML
CCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHH
AAQFHKRPDVTRVVLFNGNFGQHMAILAGFEHTRGKIVITLDADLQNPPEEIPRLVQTMR
HHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
EGHDYVGTIRRQRNDTAFRRYASRAMNGLRERITKIRMTDQGCMLRAYDRNVVDTINACR
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHH
EVNTFIPALAYTFASSPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSA
HHHHHHHHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IGTVLSLLSGVLFVVLLMRRFLFGSEVQGVFTLFAMNFFLIGILLFGLGLLGEYVGRIYQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVRDRPRYRIKAVLEAEPSRHRTEA
HHHCCCCCEEHHEEECCCCCCCCCC
>Mature Secondary Structure
MQTSLQMSPVEVSVVIPVYNEEDGLQALFDRLYPALDGLGDSYEVIFINDGSVDRSAAML
CCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHH
AAQFHKRPDVTRVVLFNGNFGQHMAILAGFEHTRGKIVITLDADLQNPPEEIPRLVQTMR
HHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
EGHDYVGTIRRQRNDTAFRRYASRAMNGLRERITKIRMTDQGCMLRAYDRNVVDTINACR
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHH
EVNTFIPALAYTFASSPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSA
HHHHHHHHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IGTVLSLLSGVLFVVLLMRRFLFGSEVQGVFTLFAMNFFLIGILLFGLGLLGEYVGRIYQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVRDRPRYRIKAVLEAEPSRHRTEA
HHHCCCCCEEHHEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA