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The map label for this gene is arnD [H]

Identifier: 73537806

GI number: 73537806

Start: 610753

End: 611646

Strand: Reverse

Name: arnD [H]

Synonym: Reut_B3973

Alternate gene names: 73537806

Gene position: 611646-610753 (Counterclockwise)

Preceding gene: 73537807

Following gene: 73537804

Centisome position: 22.44

GC content: 67.9

Gene sequence:

>894_bases
ATGGCCAGAATCGCCCTCAAGGTCGACGTCGACACGCTGCGCGGTACGCGCGAAGGCGTGCCGACGCTGTTGTCCATGCT
GGACGCGGTGCAGGCGCAGGCTACCTTCCTGTACAGCCTGGGACCGGACCACACCGGCTGGGCGCTGCGCCGGGTGTTCC
GGCCGGGTTTCCTCAAGAAGGTGTCGCGCACGTCGGTGGTCTCCAACTATGGCCTGCGCACGCTGATGTACGGCGTGCTA
CTGCCGGGGCCGGACATCGGCCGCAAGGCCGCTGCCGAGATGCGCGCGGCGCGTACGGCCGGACATGAATGCGGCATCCA
CACGTGGGACCATGTCTACTGGCAGGACAACGTGCGCCAGCGCGACCCGGCGTGGACGCGCCGGCAGATGCAGAACGCAT
TCGACCGCTACGTCGATATCTTCGGCGAGGCACCGCCCACGCATGGCGCGGCGGGCTGGCAGATGAACGACGAGGCGTTC
CGCCAGATCGACGACTGGGGCATGGCCTATGCGTCCGACGGACGCGGCACGGCGCCGTATATCCCGACCGTCGGTGGCGT
CGCGTGCCGTCACGTGCAGATGCCCACGACGCTGCCTACGCTAGATGAAATGATCGGCGTGGACGGCCTCACCGAGGACA
ACGTCCATGAGGCCGTGCTGCGGCTCACGGAAGCCACCGTTGGCGACCACGTCTTCACGCTGCATACGGAGCTGGAAGGC
GGCAAGCTCGCGCCCGTGTTCCGCCGCCTGCTGCAGGGCTGGCGCGCGCAGGGGCATGAGCTGGTGTCGATGGCCACGTA
CTACCGGCATATCGACCGCGACACGCTGCCGACGTTGCCGGTGACGTGGGGGTCGATCGAGGGACGCAGCGGCGAGCTGA
TCATCCAGCCCTGA

Upstream 100 bases:

>100_bases
GTGACGATGGAACAGGCGCTGCGCCGGATCTTCGAGGCGTATCGCGAGAAGGTCGTCGAGGCCCGCACGCTGGTCGACGG
CGACAACTGAGTACGGACCC

Downstream 100 bases:

>100_bases
GCATCACCGCCCGGCCGGGCGCGCCTGGCGCCCGGCTTGTTCCCATTGGCCGCTACCGCCGCGCCAGCCGCAGCCCGTTG
AACACCACCAGCAGGCTCGC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MARIALKVDVDTLRGTREGVPTLLSMLDAVQAQATFLYSLGPDHTGWALRRVFRPGFLKKVSRTSVVSNYGLRTLMYGVL
LPGPDIGRKAAAEMRAARTAGHECGIHTWDHVYWQDNVRQRDPAWTRRQMQNAFDRYVDIFGEAPPTHGAAGWQMNDEAF
RQIDDWGMAYASDGRGTAPYIPTVGGVACRHVQMPTTLPTLDEMIGVDGLTEDNVHEAVLRLTEATVGDHVFTLHTELEG
GKLAPVFRRLLQGWRAQGHELVSMATYYRHIDRDTLPTLPVTWGSIEGRSGELIIQP

Sequences:

>Translated_297_residues
MARIALKVDVDTLRGTREGVPTLLSMLDAVQAQATFLYSLGPDHTGWALRRVFRPGFLKKVSRTSVVSNYGLRTLMYGVL
LPGPDIGRKAAAEMRAARTAGHECGIHTWDHVYWQDNVRQRDPAWTRRQMQNAFDRYVDIFGEAPPTHGAAGWQMNDEAF
RQIDDWGMAYASDGRGTAPYIPTVGGVACRHVQMPTTLPTLDEMIGVDGLTEDNVHEAVLRLTEATVGDHVFTLHTELEG
GKLAPVFRRLLQGWRAQGHELVSMATYYRHIDRDTLPTLPVTWGSIEGRSGELIIQP
>Mature_296_residues
ARIALKVDVDTLRGTREGVPTLLSMLDAVQAQATFLYSLGPDHTGWALRRVFRPGFLKKVSRTSVVSNYGLRTLMYGVLL
PGPDIGRKAAAEMRAARTAGHECGIHTWDHVYWQDNVRQRDPAWTRRQMQNAFDRYVDIFGEAPPTHGAAGWQMNDEAFR
QIDDWGMAYASDGRGTAPYIPTVGGVACRHVQMPTTLPTLDEMIGVDGLTEDNVHEAVLRLTEATVGDHVFTLHTELEGG
KLAPVFRRLLQGWRAQGHELVSMATYYRHIDRDTLPTLPVTWGSIEGRSGELIIQP

Specific function: Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial p

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788590, Length=300, Percent_Identity=35.3333333333333, Blast_Score=160, Evalue=8e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 33119; Mature: 32988

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIALKVDVDTLRGTREGVPTLLSMLDAVQAQATFLYSLGPDHTGWALRRVFRPGFLKK
CCEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCHHHHH
VSRTSVVSNYGLRTLMYGVLLPGPDIGRKAAAEMRAARTAGHECGIHTWDHVYWQDNVRQ
HHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCC
RDPAWTRRQMQNAFDRYVDIFGEAPPTHGAAGWQMNDEAFRQIDDWGMAYASDGRGTAPY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCC
IPTVGGVACRHVQMPTTLPTLDEMIGVDGLTEDNVHEAVLRLTEATVGDHVFTLHTELEG
CCCCCCHHEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCC
GKLAPVFRRLLQGWRAQGHELVSMATYYRHIDRDTLPTLPVTWGSIEGRSGELIIQP
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCEEECC
>Mature Secondary Structure 
ARIALKVDVDTLRGTREGVPTLLSMLDAVQAQATFLYSLGPDHTGWALRRVFRPGFLKK
CEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCHHHHH
VSRTSVVSNYGLRTLMYGVLLPGPDIGRKAAAEMRAARTAGHECGIHTWDHVYWQDNVRQ
HHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCC
RDPAWTRRQMQNAFDRYVDIFGEAPPTHGAAGWQMNDEAFRQIDDWGMAYASDGRGTAPY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCC
IPTVGGVACRHVQMPTTLPTLDEMIGVDGLTEDNVHEAVLRLTEATVGDHVFTLHTELEG
CCCCCCHHEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCC
GKLAPVFRRLLQGWRAQGHELVSMATYYRHIDRDTLPTLPVTWGSIEGRSGELIIQP
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA