Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is yfiQ [C]
Identifier: 73537703
GI number: 73537703
Start: 485804
End: 487939
Strand: Reverse
Name: yfiQ [C]
Synonym: Reut_B3868
Alternate gene names: 73537703
Gene position: 487939-485804 (Counterclockwise)
Preceding gene: 73537704
Following gene: 73537702
Centisome position: 17.9
GC content: 65.73
Gene sequence:
>2136_bases ATGAGCAACCAGGGCATCTGGTTCAGCGACCTCTCGCGGCTGGTCAATCCGAACTCGATCGTGCTGGTCGGTGCGTCCGA AAAGCCGGACAGCATCGGCGGCCGCACGCTCGAGAACCTGACCACGTTCTCCGAATTCAAGGGCGAACTGCTGCTGGTCA ACCCGGGCCGCACCGAGATTCACGGCCGTCCGTGCGTGGCATCGGTCAAGGACCTGAAGGAAGCGCCGGACCTGGCCATC CTGGCCGTGCGCGCCGACATGGTCATCCAGACGCTGCGCGACTGCGGCGAGATGGGCATCAAGTTCGCGATCGTGTTCAC GTCGGGCTTTGGTGAAACCGGCGAAGACGGCCGCGCGGTGGAAGCCGAGATGCGCGAGATCGTCGCCAGCACCGGCATGC GCATCTATGGTCCGAACTGCCCCGGCCTGAACAATATGAACGCGCGCCTGGGCCTGACATTCTCGCCGGCTTGGCGCATC GACCGCCGTCCGGGCCCGATCGGCGTGGCCACGCAGGGCGGCGGCCTGGGCCGTTCGTTCATCCAGGCGATGGACCGTGG CGTGGGTGTGGGCCTGTGGTGCTCGGGCGGCAATGAAGTCGACCTCGAGGTCAGCGACTACATCCACTACATGGCCGACG CCCCCGATATCGAGGTGATCGTCACCACGCTCGAAGGCGTGCGCAATGGCCCGCGCTTCATGGCGGCCGCACTGCATGCG GCCCGACGCGGCAAGCCCATCGTCGCGATCAAGGTCGGCAAGTCGGAATACGGCGCCAAGGCGGCGCAGTCGCACACGGC CGCCATCGCTGGCTCGGCCGAGATCAACAGCGCGGTATTCAGCCAACTCGGGATCATCGAAGTCGACGATATCGATGAAC TGATCGACGTGGCATCGTTGCTCGCGCGCCGCAAGCCGACCGGCAAGGAACAGCTTGCCGTGTACAGCTTCTCGGGCGGC ACCGCCGCGCTGGCGTCCGACATGGTCGGCCTGGCCGGCCTCAAGCTGTCCGAGTTCGCGCCGCACACGATCGAAGCGCT CCGGAATGCCCTGCCCGGCTTCGCCGCGTTCACCAATCCGGTCGACGTGACGGCCGAAGTACTGGTCAATACCGAAGTCA GCTACGCCACGCTCAAGGCCACTGCCGCCGACCCGAATACCGACCTGGTGCTCGTGCCGATCCCGGTCGAGTACGGCAAG ACCACGGCCATGCTGGCCGACAGCATGGTGCACGTGCAGCAGGAAGAAACCAACACGCCGATCGTGCCGGTCTGGATGAG CGACCGCACCGGCGAAGGCCATCGCAAGATGATCGACGGCGGGCTGATGCCGATGCGCGCCGTTGGCAACGCCGTGCTGG CTGTCCAGCGCTTCATTGAATACGGCCGCTGGAAAGCGAAGTTCGAGCGCGAATGGTGTCCTCTGGCTGACGTGAGCACC GCCGAGACCACTGCCAACCTGTCCGAAGCGAAGACCAAGGCGCTGCTGGAACAGGCGGGCGTCCCAACGCCGCAGGGCGT GGTGGCACGCTCGCCGGCTGAGGCCGCGCAGGCGTTCCGCAATGTCGGCAATGGCAAAGCGGTCATGAAAATCGTGAGCG CGGCCATCACGCACAAGACCGATATCGGTGGCGTGCGGCTGGGCATTGCATCCGAAGGTGCGGCCATGGCCGCGTATGAG GAAATCCACGCCAACGGCGTGAAAGCCTGCGACGCCGCGCAGATCGACGGCGTGCTGGTGGAGCCGATGCTGCCCTCCCC GTTCGTGGAAGCCGTGGTGGGCATCCACCGCGATCCGGTGTTCGGCCACGTGTGTACGTTCGGGCTGGGCGGCGTCAGCA TCGAGCTGTTCAAGGATGTGAGCCGCCGCCTGCTGCCGCTCACGCCGGCCTCGGCGCGCGAGATGATCACCGAGACGCGC TGCTATGAACTGCTCAAGGGCTATCGCGGCCAGCCGGCGTTCGATATCGACGCGCTCGTCGACATGCTGGTGAAGCTGTC CGACTTCGTGGGCAAGCATGCCGCGCGCATCGAAGAGCTGGAGATCAACCCCCTCGCGGTGCGTCCGCAGGGTCAGGGAG TGGCTGCGCTGGACGCCGTCCTCTCGTTTCAGGGCATGGAGCCTTCAACATGGTAA
Upstream 100 bases:
>100_bases TCATTGCCTTCATGCGCAAGGCCGTGAACCAGCGTGGCGAAGTCGTGGCGGAAATGGCCGCTACCTGCCTGTTCAAGCGC CGCCCGACGGGAGAAGCGCA
Downstream 100 bases:
>100_bases CGACTGTCAAGACTGAAATCGGCTACACCACCACCGACACGATCATGGTGCGTGGCCTGAACCTCGCCACGGAGATCATC GGCAAGTTCGATTTTGTCGA
Product: CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 711; Mature: 710
Protein sequence:
>711_residues MSNQGIWFSDLSRLVNPNSIVLVGASEKPDSIGGRTLENLTTFSEFKGELLLVNPGRTEIHGRPCVASVKDLKEAPDLAI LAVRADMVIQTLRDCGEMGIKFAIVFTSGFGETGEDGRAVEAEMREIVASTGMRIYGPNCPGLNNMNARLGLTFSPAWRI DRRPGPIGVATQGGGLGRSFIQAMDRGVGVGLWCSGGNEVDLEVSDYIHYMADAPDIEVIVTTLEGVRNGPRFMAAALHA ARRGKPIVAIKVGKSEYGAKAAQSHTAAIAGSAEINSAVFSQLGIIEVDDIDELIDVASLLARRKPTGKEQLAVYSFSGG TAALASDMVGLAGLKLSEFAPHTIEALRNALPGFAAFTNPVDVTAEVLVNTEVSYATLKATAADPNTDLVLVPIPVEYGK TTAMLADSMVHVQQEETNTPIVPVWMSDRTGEGHRKMIDGGLMPMRAVGNAVLAVQRFIEYGRWKAKFEREWCPLADVST AETTANLSEAKTKALLEQAGVPTPQGVVARSPAEAAQAFRNVGNGKAVMKIVSAAITHKTDIGGVRLGIASEGAAMAAYE EIHANGVKACDAAQIDGVLVEPMLPSPFVEAVVGIHRDPVFGHVCTFGLGGVSIELFKDVSRRLLPLTPASAREMITETR CYELLKGYRGQPAFDIDALVDMLVKLSDFVGKHAARIEELEINPLAVRPQGQGVAALDAVLSFQGMEPSTW
Sequences:
>Translated_711_residues MSNQGIWFSDLSRLVNPNSIVLVGASEKPDSIGGRTLENLTTFSEFKGELLLVNPGRTEIHGRPCVASVKDLKEAPDLAI LAVRADMVIQTLRDCGEMGIKFAIVFTSGFGETGEDGRAVEAEMREIVASTGMRIYGPNCPGLNNMNARLGLTFSPAWRI DRRPGPIGVATQGGGLGRSFIQAMDRGVGVGLWCSGGNEVDLEVSDYIHYMADAPDIEVIVTTLEGVRNGPRFMAAALHA ARRGKPIVAIKVGKSEYGAKAAQSHTAAIAGSAEINSAVFSQLGIIEVDDIDELIDVASLLARRKPTGKEQLAVYSFSGG TAALASDMVGLAGLKLSEFAPHTIEALRNALPGFAAFTNPVDVTAEVLVNTEVSYATLKATAADPNTDLVLVPIPVEYGK TTAMLADSMVHVQQEETNTPIVPVWMSDRTGEGHRKMIDGGLMPMRAVGNAVLAVQRFIEYGRWKAKFEREWCPLADVST AETTANLSEAKTKALLEQAGVPTPQGVVARSPAEAAQAFRNVGNGKAVMKIVSAAITHKTDIGGVRLGIASEGAAMAAYE EIHANGVKACDAAQIDGVLVEPMLPSPFVEAVVGIHRDPVFGHVCTFGLGGVSIELFKDVSRRLLPLTPASAREMITETR CYELLKGYRGQPAFDIDALVDMLVKLSDFVGKHAARIEELEINPLAVRPQGQGVAALDAVLSFQGMEPSTW >Mature_710_residues SNQGIWFSDLSRLVNPNSIVLVGASEKPDSIGGRTLENLTTFSEFKGELLLVNPGRTEIHGRPCVASVKDLKEAPDLAIL AVRADMVIQTLRDCGEMGIKFAIVFTSGFGETGEDGRAVEAEMREIVASTGMRIYGPNCPGLNNMNARLGLTFSPAWRID RRPGPIGVATQGGGLGRSFIQAMDRGVGVGLWCSGGNEVDLEVSDYIHYMADAPDIEVIVTTLEGVRNGPRFMAAALHAA RRGKPIVAIKVGKSEYGAKAAQSHTAAIAGSAEINSAVFSQLGIIEVDDIDELIDVASLLARRKPTGKEQLAVYSFSGGT AALASDMVGLAGLKLSEFAPHTIEALRNALPGFAAFTNPVDVTAEVLVNTEVSYATLKATAADPNTDLVLVPIPVEYGKT TAMLADSMVHVQQEETNTPIVPVWMSDRTGEGHRKMIDGGLMPMRAVGNAVLAVQRFIEYGRWKAKFEREWCPLADVSTA ETTANLSEAKTKALLEQAGVPTPQGVVARSPAEAAQAFRNVGNGKAVMKIVSAAITHKTDIGGVRLGIASEGAAMAAYEE IHANGVKACDAAQIDGVLVEPMLPSPFVEAVVGIHRDPVFGHVCTFGLGGVSIELFKDVSRRLLPLTPASAREMITETRC YELLKGYRGQPAFDIDALVDMLVKLSDFVGKHAARIEELEINPLAVRPQGQGVAALDAVLSFQGMEPSTW
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=726, Percent_Identity=25.068870523416, Blast_Score=175, Evalue=8e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 75657; Mature: 75525
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQGIWFSDLSRLVNPNSIVLVGASEKPDSIGGRTLENLTTFSEFKGELLLVNPGRTEI CCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCC HGRPCVASVKDLKEAPDLAILAVRADMVIQTLRDCGEMGIKFAIVFTSGFGETGEDGRAV CCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCHH EAEMREIVASTGMRIYGPNCPGLNNMNARLGLTFSPAWRIDRRPGPIGVATQGGGLGRSF HHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCEEECCCCCCEEEEECCCCCHHHH IQAMDRGVGVGLWCSGGNEVDLEVSDYIHYMADAPDIEVIVTTLEGVRNGPRFMAAALHA HHHHHCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCEEEEEEHHHHCCCHHHHHHHHHH ARRGKPIVAIKVGKSEYGAKAAQSHTAAIAGSAEINSAVFSQLGIIEVDDIDELIDVASL HHCCCCEEEEEECCCHHCCHHHHCCHHEEECCCHHHHHHHHHCCCEEECCHHHHHHHHHH LARRKPTGKEQLAVYSFSGGTAALASDMVGLAGLKLSEFAPHTIEALRNALPGFAAFTNP HHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCHHCCCC VDVTAEVLVNTEVSYATLKATAADPNTDLVLVPIPVEYGKTTAMLADSMVHVQQEETNTP CCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC IVPVWMSDRTGEGHRKMIDGGLMPMRAVGNAVLAVQRFIEYGRWKAKFEREWCPLADVST EEEEEECCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCC AETTANLSEAKTKALLEQAGVPTPQGVVARSPAEAAQAFRNVGNGKAVMKIVSAAITHKT HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC DIGGVRLGIASEGAAMAAYEEIHANGVKACDAAQIDGVLVEPMLPSPFVEAVVGIHRDPV CCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHCCCEEECCCCCCHHHHHHHHCCCCCC FGHVCTFGLGGVSIELFKDVSRRLLPLTPASAREMITETRCYELLKGYRGQPAFDIDALV HHHHHHHCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH DMLVKLSDFVGKHAARIEELEINPLAVRPQGQGVAALDAVLSFQGMEPSTW HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SNQGIWFSDLSRLVNPNSIVLVGASEKPDSIGGRTLENLTTFSEFKGELLLVNPGRTEI CCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCC HGRPCVASVKDLKEAPDLAILAVRADMVIQTLRDCGEMGIKFAIVFTSGFGETGEDGRAV CCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCHH EAEMREIVASTGMRIYGPNCPGLNNMNARLGLTFSPAWRIDRRPGPIGVATQGGGLGRSF HHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCEEECCCCCCEEEEECCCCCHHHH IQAMDRGVGVGLWCSGGNEVDLEVSDYIHYMADAPDIEVIVTTLEGVRNGPRFMAAALHA HHHHHCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCEEEEEEHHHHCCCHHHHHHHHHH ARRGKPIVAIKVGKSEYGAKAAQSHTAAIAGSAEINSAVFSQLGIIEVDDIDELIDVASL HHCCCCEEEEEECCCHHCCHHHHCCHHEEECCCHHHHHHHHHCCCEEECCHHHHHHHHHH LARRKPTGKEQLAVYSFSGGTAALASDMVGLAGLKLSEFAPHTIEALRNALPGFAAFTNP HHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCHHCCCC VDVTAEVLVNTEVSYATLKATAADPNTDLVLVPIPVEYGKTTAMLADSMVHVQQEETNTP CCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC IVPVWMSDRTGEGHRKMIDGGLMPMRAVGNAVLAVQRFIEYGRWKAKFEREWCPLADVST EEEEEECCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCC AETTANLSEAKTKALLEQAGVPTPQGVVARSPAEAAQAFRNVGNGKAVMKIVSAAITHKT HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC DIGGVRLGIASEGAAMAAYEEIHANGVKACDAAQIDGVLVEPMLPSPFVEAVVGIHRDPV CCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHCCCEEECCCCCCHHHHHHHHCCCCCC FGHVCTFGLGGVSIELFKDVSRRLLPLTPASAREMITETRCYELLKGYRGQPAFDIDALV HHHHHHHCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH DMLVKLSDFVGKHAARIEELEINPLAVRPQGQGVAALDAVLSFQGMEPSTW HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]