Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_007348 |
Length | 2,726,152 |
Click here to switch to the map view.
The map label for this gene is yfeW [C]
Identifier: 73537688
GI number: 73537688
Start: 468314
End: 469561
Strand: Reverse
Name: yfeW [C]
Synonym: Reut_B3853
Alternate gene names: 73537688
Gene position: 469561-468314 (Counterclockwise)
Preceding gene: 73537689
Following gene: 73537687
Centisome position: 17.22
GC content: 65.38
Gene sequence:
>1248_bases TTGCCTCTCACCCGTGCCCTCGAACACGCGGCTTCCCCCGAACAGGTGGGACTGTCCACCCGGCGGTTGCAGTCGATCTC ATCGGTGATCCATGCCGATGTCGACCGGCGCAAGATCCCCGGCGCAGTCGTGCTTGTGGCGCGCAAGGGCCGGATCGCCT GGTCCGAGGCGTTTGGCTTCGAGCAAGCCGATACGCCGTCGCGCCCGATGCAGCGCCATTCGGTCTTCCGCATTGCCGCG ATGACGCGGCCCATTGTCGGCGTGGCGGCGCTGATATTGATGGAAGAAGGCCGGCTGTCCCTGAACGACCCGGTCGAACG CTACATCCCCGAGTTCGCCAGCCTCCAGGTCGGCGTCGAGTCGGTCGATGCGAATACCGGCGAACGCCGCCTCGCACTCG AACCCGTGCGCCGCGCCATGACCGTTCACGACCTGTTCCGGCACACGTCCGGCCTGACTTACGGGCAGTTCGGCGATTCG CTGGTGCAGCGTCAGTATCGCGAAAGCGGCCTCATGGATCCCGCACAGACCAATGCGGAGATGGTCGCGAAGCTGGCGGC CATCCCGCTGCAATGCCAGCCGGGCGAGGTATTCGAATATGGCATGTCCACCGACGTGCTGGGCCGCATCATCGAGATTG TCTCGGGCATGGACCTCGCCCGCTTCGTCGCGGAGCGCGTGACGCAGCCGCTGCGCATGCATGCCACGGGCTTCCACCTG ATCAGGCAGGACGGTGCCGGGCTGGCACTGCAATCCGGCGCATCCGGAAAATCCACCGCGCTGTTCGACTACGACGAACA CCACCCGCCGCGCTGGCATTCCGGTGGCGCCGGCCTGCTGTCCACGGCCGGCGACTATGCGCGCTTCTGCCAGATGCTGC TCAATGGCGGGGCGCTCGATGGCGTGCGCCTGCTTTCACGCAAGACCGTCGAACTGATGCTTGGCAACCACCTTCCGCAG TCCACGCGATTTGGCGGTTCGACAACCGGGCTCGGCATCAACGCGCCATTGCCTGATCTCGGCCAGGGCCATGGCCTGGC AGTGGGCGTACGCACCGCATCGGGCTTGAGCCCGGTACCCGGTTCCATCGGCGATTTTTACTGGGGCGGCGCGCTCGGGA CCTATTTCTGGGCGGATCCGCAAGAGCAGCTGATCGCCATCCTGATGCTTCAGGAAAACGACCTGGCGACGCGCACCGGA TACCGGTCCCTCTTGCGCAACATCGTATATGCCGCGCTGGAAGACTGA
Upstream 100 bases:
>100_bases TCATTCACCGGACCGCCCCTCTGCCTAGAATCGGCACACATACCGGCACGGCGCATCGCGCCAAGCCTCCTCGATTTGCC GAATCCTGCAGGAGCCTGCA
Downstream 100 bases:
>100_bases GCGGCGACGCTTTGCGGCGACTGGCAGTGCAGCACGCACACGGCGCCACGTACCAATTTTGGAGGAGCAAGCATGAAGAC CATGAACCGGCGCTGGATCC
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MPLTRALEHAASPEQVGLSTRRLQSISSVIHADVDRRKIPGAVVLVARKGRIAWSEAFGFEQADTPSRPMQRHSVFRIAA MTRPIVGVAALILMEEGRLSLNDPVERYIPEFASLQVGVESVDANTGERRLALEPVRRAMTVHDLFRHTSGLTYGQFGDS LVQRQYRESGLMDPAQTNAEMVAKLAAIPLQCQPGEVFEYGMSTDVLGRIIEIVSGMDLARFVAERVTQPLRMHATGFHL IRQDGAGLALQSGASGKSTALFDYDEHHPPRWHSGGAGLLSTAGDYARFCQMLLNGGALDGVRLLSRKTVELMLGNHLPQ STRFGGSTTGLGINAPLPDLGQGHGLAVGVRTASGLSPVPGSIGDFYWGGALGTYFWADPQEQLIAILMLQENDLATRTG YRSLLRNIVYAALED
Sequences:
>Translated_415_residues MPLTRALEHAASPEQVGLSTRRLQSISSVIHADVDRRKIPGAVVLVARKGRIAWSEAFGFEQADTPSRPMQRHSVFRIAA MTRPIVGVAALILMEEGRLSLNDPVERYIPEFASLQVGVESVDANTGERRLALEPVRRAMTVHDLFRHTSGLTYGQFGDS LVQRQYRESGLMDPAQTNAEMVAKLAAIPLQCQPGEVFEYGMSTDVLGRIIEIVSGMDLARFVAERVTQPLRMHATGFHL IRQDGAGLALQSGASGKSTALFDYDEHHPPRWHSGGAGLLSTAGDYARFCQMLLNGGALDGVRLLSRKTVELMLGNHLPQ STRFGGSTTGLGINAPLPDLGQGHGLAVGVRTASGLSPVPGSIGDFYWGGALGTYFWADPQEQLIAILMLQENDLATRTG YRSLLRNIVYAALED >Mature_414_residues PLTRALEHAASPEQVGLSTRRLQSISSVIHADVDRRKIPGAVVLVARKGRIAWSEAFGFEQADTPSRPMQRHSVFRIAAM TRPIVGVAALILMEEGRLSLNDPVERYIPEFASLQVGVESVDANTGERRLALEPVRRAMTVHDLFRHTSGLTYGQFGDSL VQRQYRESGLMDPAQTNAEMVAKLAAIPLQCQPGEVFEYGMSTDVLGRIIEIVSGMDLARFVAERVTQPLRMHATGFHLI RQDGAGLALQSGASGKSTALFDYDEHHPPRWHSGGAGLLSTAGDYARFCQMLLNGGALDGVRLLSRKTVELMLGNHLPQS TRFGGSTTGLGINAPLPDLGQGHGLAVGVRTASGLSPVPGSIGDFYWGGALGTYFWADPQEQLIAILMLQENDLATRTGY RSLLRNIVYAALED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 45024; Mature: 44893
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTRALEHAASPEQVGLSTRRLQSISSVIHADVDRRKIPGAVVLVARKGRIAWSEAFGF CCHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCEEHHHHCCC EQADTPSRPMQRHSVFRIAAMTRPIVGVAALILMEEGRLSLNDPVERYIPEFASLQVGVE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHH SVDANTGERRLALEPVRRAMTVHDLFRHTSGLTYGQFGDSLVQRQYRESGLMDPAQTNAE HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHCCHH MVAKLAAIPLQCQPGEVFEYGMSTDVLGRIIEIVSGMDLARFVAERVTQPLRMHATGFHL HHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH IRQDGAGLALQSGASGKSTALFDYDEHHPPRWHSGGAGLLSTAGDYARFCQMLLNGGALD EEECCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCHH GVRLLSRKTVELMLGNHLPQSTRFGGSTTGLGINAPLPDLGQGHGLAVGVRTASGLSPVP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC GSIGDFYWGGALGTYFWADPQEQLIAILMLQENDLATRTGYRSLLRNIVYAALED CCCCCCHHCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLTRALEHAASPEQVGLSTRRLQSISSVIHADVDRRKIPGAVVLVARKGRIAWSEAFGF CHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCEEHHHHCCC EQADTPSRPMQRHSVFRIAAMTRPIVGVAALILMEEGRLSLNDPVERYIPEFASLQVGVE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHH SVDANTGERRLALEPVRRAMTVHDLFRHTSGLTYGQFGDSLVQRQYRESGLMDPAQTNAE HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHCCHH MVAKLAAIPLQCQPGEVFEYGMSTDVLGRIIEIVSGMDLARFVAERVTQPLRMHATGFHL HHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH IRQDGAGLALQSGASGKSTALFDYDEHHPPRWHSGGAGLLSTAGDYARFCQMLLNGGALD EEECCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCHH GVRLLSRKTVELMLGNHLPQSTRFGGSTTGLGINAPLPDLGQGHGLAVGVRTASGLSPVP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC GSIGDFYWGGALGTYFWADPQEQLIAILMLQENDLATRTGYRSLLRNIVYAALED CCCCCCHHCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]