| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is yfiQ [C]
Identifier: 73537662
GI number: 73537662
Start: 437257
End: 439359
Strand: Reverse
Name: yfiQ [C]
Synonym: Reut_B3827
Alternate gene names: 73537662
Gene position: 439359-437257 (Counterclockwise)
Preceding gene: 73537663
Following gene: 73537660
Centisome position: 16.12
GC content: 66.9
Gene sequence:
>2103_bases ATGAACACCACACCCACTGCTATTCCGGACTGCCTGCTCAATCCCCGCTCGGTCGCCATCATCGGCGCATCCGATGAGCC GACCCGCATCGGCGGCCGCCCGATTTCGTCGATGCTGGCCAAGGGCTATGCCGGCCGCATCATGCCCGTCAATCCGAACC GGTCCACGGTGCAGGGCCTGCCGACCTATGCATCGGTTGCCGACCTGCCGGAAGTCCCCGACGTCGCCATCATCGCCGTC CCTGCCCAGCACGCGCTGCAGGCAGTCAAGGCCCTGGCCGAGCGTGGCACCAAGGCCGCGATCCTGTTCACCGCCGGCTT CGCCGAAGTCAGCGAGGAAGGCGCCGCCATGCAGGCCGAAATGGTCGCCATCGCACGCCGCGGCGGCATGCGCCTGCTTG GTCCGAACACGCTGGGCATGGTCAACATGCACAACGGCTTCGTCGGCAGCTTCTCGACCTTCTCGTCATTGGGGGTCTCG CGTCCCGGCCGGGTCGGCATCGTCAGCCAGTCCGGCGCCTATGGCAGCCACCTGGTCAGCTCGGCGATGGAAGCGGGCGT CTATCCGTCGAGCATCGTCATGACCGGCAACGAAGCCGACCTGAACGTCAGCGACATCGTGCGCCTGTTCGCCGCCGACC CGATGACCGACGTGATCGCAGTCTATGCAGAAGGCATCAGCGATGGCCCGGGCCTGGTTGATGCGCTGAAGGCTGCCCAT GCCGCCGGCAAGCCGGTGGTGATGATGAAGGTGGGCCGCAGCGAAGTGGGTGGCGCGGCCGCGCGCTCGCACACCGCTTC CATCGCAGGCGACGACGCGGTGGTCAGCGCGGTGCTGGATGAGCTTGGCGTGGTGCGCGTGCGCACCACCGAGGAAATGC TCGACATCCTGCGCCTGGCCTCGCGCCGCGTGTTCCCCGCCGACAATACGCTGGGCGTGGTGACCATCAGCGGCGGCGCT GGCGTGATCATTTCCGATGCCGCCGAAGACCTCGGCATCCCCATGCCCGAGATGCCGGCCGCGGCCCAGGCCCGCATGCT AGAAAAGCTGCCGATCTGCGCGCCGCGCAACCCGGTGGACGTGACCGCCCAGTTCATCAACGACACGACCCTGGTCACGC CGTTTACCGAGGCCATGATGGGCGAAGGCGGCTACGGCACGCTGCTCGCGTTCTTCAGCTATGCGGCCTCTTACCACACC GTGGCAGACACGCTCCTGCAGCAACTCGCCGACGTGCGCAAGCGCTACCCGGACCGCCTCTACGTGATGGTGGGGCGCGG TGACCCGACCGTCCTGGCACGCTACGAGGAAGCCGGCTTCACGGTATTCGGCGACCCGAGCCGCGCCGTAGCCGCCATCG CCGCGATGGGCCGCTTCGGCCGCGCCCTTGCCGGCAAGACCACTGCGCCGGCACCCCAGGTCCCCGCCGTCACCTTGCCC TCGGCAACGCCCACCGAGGCCGAAGCCAAGGCGCTGCTCGCCGAAGCCGGTATTCCGAGCGCACCGGAACGTGCCTGCGC CGATGAAGAAGCCGCGGTACGCGCCGCGCGCGAGATCGGCTTCCCGCTCGTGCTCAAGATCCTGTCGCCGGACATCCTGC ACAAGTCGGAGATCGGCGGCGTGCTGCTGAACGTGAACAGCGAAGGTGCTGTGCGCGAAGGCTTCGCGCTGCTGCTCGAA CGCGCGCACAAGGCCGTGCCCGATGCGCGCATCGAAGGCGTGCTGGTGGCAAAACAGCTCGTTGGCGGCGTGGAATGCAT TATGGGCATCAACCGTGATCCGGTGTTCGGGCCGATCGCCATGTTTGGTCTTGGCGGTGTGTTTGTGGAAATCCTCAAGG ACGTGGTGTTCCATCGCTGCCCGTTCGGGCCGGATGTTGCCGAAGAGATGATTCGTTCGATCAAGGGAGCGCCGCTGCTG CTGGGCGCTCGCGGGCGGCCGGTTACGGATATTCCTGCGCTGGCGCGTACGCTGTCGCAGCTCTCCGCCTTTGCTGTGGC CGCCGGGCCGCGGTTGCAGTCGATTGATCTGAATCCGGTGCTGGCGATGCCGGAGGGTCAAGGGGCTTATGCGGTGGATG CGGTGATTGAGGTTGGGGAATAA
Upstream 100 bases:
>100_bases ACGGCATGACAAGCCGCACCCGGTGCCGGCCATGGTCCGGCGCCGGCGTTGCGGCCACTACACCGCTACACCATAGGATC CAACAAGACAATCCACCGCC
Downstream 100 bases:
>100_bases GGTGTGGGGGTGGCGTTGATCGGCCCATCGTGCTTGGCCGGCGCCGCCTTTTTTTTGCCGGCCTTGCCGACGGGTTCTGG TTGAGACCGGGTTATCGCTC
Product: CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 700
Protein sequence:
>700_residues MNTTPTAIPDCLLNPRSVAIIGASDEPTRIGGRPISSMLAKGYAGRIMPVNPNRSTVQGLPTYASVADLPEVPDVAIIAV PAQHALQAVKALAERGTKAAILFTAGFAEVSEEGAAMQAEMVAIARRGGMRLLGPNTLGMVNMHNGFVGSFSTFSSLGVS RPGRVGIVSQSGAYGSHLVSSAMEAGVYPSSIVMTGNEADLNVSDIVRLFAADPMTDVIAVYAEGISDGPGLVDALKAAH AAGKPVVMMKVGRSEVGGAAARSHTASIAGDDAVVSAVLDELGVVRVRTTEEMLDILRLASRRVFPADNTLGVVTISGGA GVIISDAAEDLGIPMPEMPAAAQARMLEKLPICAPRNPVDVTAQFINDTTLVTPFTEAMMGEGGYGTLLAFFSYAASYHT VADTLLQQLADVRKRYPDRLYVMVGRGDPTVLARYEEAGFTVFGDPSRAVAAIAAMGRFGRALAGKTTAPAPQVPAVTLP SATPTEAEAKALLAEAGIPSAPERACADEEAAVRAAREIGFPLVLKILSPDILHKSEIGGVLLNVNSEGAVREGFALLLE RAHKAVPDARIEGVLVAKQLVGGVECIMGINRDPVFGPIAMFGLGGVFVEILKDVVFHRCPFGPDVAEEMIRSIKGAPLL LGARGRPVTDIPALARTLSQLSAFAVAAGPRLQSIDLNPVLAMPEGQGAYAVDAVIEVGE
Sequences:
>Translated_700_residues MNTTPTAIPDCLLNPRSVAIIGASDEPTRIGGRPISSMLAKGYAGRIMPVNPNRSTVQGLPTYASVADLPEVPDVAIIAV PAQHALQAVKALAERGTKAAILFTAGFAEVSEEGAAMQAEMVAIARRGGMRLLGPNTLGMVNMHNGFVGSFSTFSSLGVS RPGRVGIVSQSGAYGSHLVSSAMEAGVYPSSIVMTGNEADLNVSDIVRLFAADPMTDVIAVYAEGISDGPGLVDALKAAH AAGKPVVMMKVGRSEVGGAAARSHTASIAGDDAVVSAVLDELGVVRVRTTEEMLDILRLASRRVFPADNTLGVVTISGGA GVIISDAAEDLGIPMPEMPAAAQARMLEKLPICAPRNPVDVTAQFINDTTLVTPFTEAMMGEGGYGTLLAFFSYAASYHT VADTLLQQLADVRKRYPDRLYVMVGRGDPTVLARYEEAGFTVFGDPSRAVAAIAAMGRFGRALAGKTTAPAPQVPAVTLP SATPTEAEAKALLAEAGIPSAPERACADEEAAVRAAREIGFPLVLKILSPDILHKSEIGGVLLNVNSEGAVREGFALLLE RAHKAVPDARIEGVLVAKQLVGGVECIMGINRDPVFGPIAMFGLGGVFVEILKDVVFHRCPFGPDVAEEMIRSIKGAPLL LGARGRPVTDIPALARTLSQLSAFAVAAGPRLQSIDLNPVLAMPEGQGAYAVDAVIEVGE >Mature_700_residues MNTTPTAIPDCLLNPRSVAIIGASDEPTRIGGRPISSMLAKGYAGRIMPVNPNRSTVQGLPTYASVADLPEVPDVAIIAV PAQHALQAVKALAERGTKAAILFTAGFAEVSEEGAAMQAEMVAIARRGGMRLLGPNTLGMVNMHNGFVGSFSTFSSLGVS RPGRVGIVSQSGAYGSHLVSSAMEAGVYPSSIVMTGNEADLNVSDIVRLFAADPMTDVIAVYAEGISDGPGLVDALKAAH AAGKPVVMMKVGRSEVGGAAARSHTASIAGDDAVVSAVLDELGVVRVRTTEEMLDILRLASRRVFPADNTLGVVTISGGA GVIISDAAEDLGIPMPEMPAAAQARMLEKLPICAPRNPVDVTAQFINDTTLVTPFTEAMMGEGGYGTLLAFFSYAASYHT VADTLLQQLADVRKRYPDRLYVMVGRGDPTVLARYEEAGFTVFGDPSRAVAAIAAMGRFGRALAGKTTAPAPQVPAVTLP SATPTEAEAKALLAEAGIPSAPERACADEEAAVRAAREIGFPLVLKILSPDILHKSEIGGVLLNVNSEGAVREGFALLLE RAHKAVPDARIEGVLVAKQLVGGVECIMGINRDPVFGPIAMFGLGGVFVEILKDVVFHRCPFGPDVAEEMIRSIKGAPLL LGARGRPVTDIPALARTLSQLSAFAVAAGPRLQSIDLNPVLAMPEGQGAYAVDAVIEVGE
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=724, Percent_Identity=28.0386740331492, Blast_Score=231, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 72661; Mature: 72661
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTPTAIPDCLLNPRSVAIIGASDEPTRIGGRPISSMLAKGYAGRIMPVNPNRSTVQGL CCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCHHHCCC PTYASVADLPEVPDVAIIAVPAQHALQAVKALAERGTKAAILFTAGFAEVSEEGAAMQAE CCHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCHHHHH MVAIARRGGMRLLGPNTLGMVNMHNGFVGSFSTFSSLGVSRPGRVGIVSQSGAYGSHLVS HHHHHHCCCEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHH SAMEAGVYPSSIVMTGNEADLNVSDIVRLFAADPMTDVIAVYAEGISDGPGLVDALKAAH HHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHH AAGKPVVMMKVGRSEVGGAAARSHTASIAGDDAVVSAVLDELGVVRVRTTEEMLDILRLA CCCCCEEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCEEEEECHHHHHHHHHHH SRRVFPADNTLGVVTISGGAGVIISDAAEDLGIPMPEMPAAAQARMLEKLPICAPRNPVD HCCCCCCCCCEEEEEECCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHH VTAQFINDTTLVTPFTEAMMGEGGYGTLLAFFSYAASYHTVADTLLQQLADVRKRYPDRL HHHHHHCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE YVMVGRGDPTVLARYEEAGFTVFGDPSRAVAAIAAMGRFGRALAGKTTAPAPQVPAVTLP EEEEECCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC SATPTEAEAKALLAEAGIPSAPERACADEEAAVRAAREIGFPLVLKILSPDILHKSEIGG CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCE VLLNVNSEGAVREGFALLLERAHKAVPDARIEGVLVAKQLVGGVECIMGINRDPVFGPIA EEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHH MFGLGGVFVEILKDVVFHRCPFGPDVAEEMIRSIKGAPLLLGARGRPVTDIPALARTLSQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHH LSAFAVAAGPRLQSIDLNPVLAMPEGQGAYAVDAVIEVGE HHHHHHHCCCCEEEECCCCEEECCCCCCCEEEEEEEECCC >Mature Secondary Structure MNTTPTAIPDCLLNPRSVAIIGASDEPTRIGGRPISSMLAKGYAGRIMPVNPNRSTVQGL CCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCHHHCCC PTYASVADLPEVPDVAIIAVPAQHALQAVKALAERGTKAAILFTAGFAEVSEEGAAMQAE CCHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCHHHHH MVAIARRGGMRLLGPNTLGMVNMHNGFVGSFSTFSSLGVSRPGRVGIVSQSGAYGSHLVS HHHHHHCCCEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHH SAMEAGVYPSSIVMTGNEADLNVSDIVRLFAADPMTDVIAVYAEGISDGPGLVDALKAAH HHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHH AAGKPVVMMKVGRSEVGGAAARSHTASIAGDDAVVSAVLDELGVVRVRTTEEMLDILRLA CCCCCEEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCEEEEECHHHHHHHHHHH SRRVFPADNTLGVVTISGGAGVIISDAAEDLGIPMPEMPAAAQARMLEKLPICAPRNPVD HCCCCCCCCCEEEEEECCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHH VTAQFINDTTLVTPFTEAMMGEGGYGTLLAFFSYAASYHTVADTLLQQLADVRKRYPDRL HHHHHHCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE YVMVGRGDPTVLARYEEAGFTVFGDPSRAVAAIAAMGRFGRALAGKTTAPAPQVPAVTLP EEEEECCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC SATPTEAEAKALLAEAGIPSAPERACADEEAAVRAAREIGFPLVLKILSPDILHKSEIGG CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCE VLLNVNSEGAVREGFALLLERAHKAVPDARIEGVLVAKQLVGGVECIMGINRDPVFGPIA EEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHH MFGLGGVFVEILKDVVFHRCPFGPDVAEEMIRSIKGAPLLLGARGRPVTDIPALARTLSQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHH LSAFAVAAGPRLQSIDLNPVLAMPEGQGAYAVDAVIEVGE HHHHHHHCCCCEEEECCCCEEECCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]