| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is yxjC [H]
Identifier: 73537563
GI number: 73537563
Start: 320882
End: 322273
Strand: Direct
Name: yxjC [H]
Synonym: Reut_B3728
Alternate gene names: 73537563
Gene position: 320882-322273 (Clockwise)
Preceding gene: 73537561
Following gene: 73537564
Centisome position: 11.77
GC content: 66.02
Gene sequence:
>1392_bases ATGTCCTTTGTGATCGTCGTTGCTGCTCTAGCCTTCCTGATGCTTGCCGCCTACCGCGGCTACAGCGTCATCCTGTTTGC CCCGCTGGCCGCCCTTGGCGCCGTGCTGCTGACCGACCCGTCGGCCGTGGCGCCAGCCTTTACAGGCATCTTCATGGAGA AGATGGTCGGTTTCGTGAAGCTGTATTTCCCGGTGTTCCTGCTCGGCGCCGTGTTCGGCAAGGTCATCGAGCTGTCGGGC TACTCGCGCTCGATCGTAGCGGCCGCGATCCGCTACATCGGCAGCTCGCGCGCAAACGCGGTGATCGTCGCCGTGTGCGC GCTGCTGACCTATGGCGGCGTGTCGCTGTTCGTGGTCGTGTTCGCGGTCTATCCGTTCGCGGCGGAGCTTTACCGCCAGA GCAATATCCCTAAACGGCTGATGCCGGGCGCGATCGCGCTGGGCGCGTTCTCGTTCACGATGGATTCGCTGCCCGGTACG CCGCAGATCCAGAACATCATCCCGACCACGTTCTTCAAGACTACCGCCTGGGCGGCGCCCGTGCTGGGCGTAGCCGGTGC GCTGTTCATCATCGTGGTGGGCCTGAGCTACCTGGAATGGCGCCGTCGCGCCGCCATGGCGAAGGGCGAAGGCTATGGCA CGTCGCTGCTGAACGAGCCGGAACCGATCGAGACGGCCCAGCTTCCGAACCCGCTGCTGGCCATCGCGCCGCTGGTGCTG GTCGGCGTGTCCAACTTCGTGCTGACGCGCATGATCCCGCAGTGGTACGGCACGACCGCTGGTCTGGAACTGCCCGGACT GGCCAAGCCGGTAACCGTCCCGGTCGCCTCGGTGGTCGCGATCTGGGCCGTGGAAGGCGCGCTGCTGCTGGGCATCCTGC TCGTGGTCGTGACCGCGTTCGGCACCGTGCGCCAGCGCTTTGCCGAAGGCAGCAAGGCCGCAGTGGGCGGTGCGCTGCTG GCGGCCATGAACACAGCTTCGGAATATGGCTTCGGGGGTGTGATCGCGGCGCTGCCGGGTTTCCTGGTGGTGGGCGATGC GCTGCACAGCATTCCCAACCCGCTCGTCAATGCTGCGGTTTCGGTGAGCGCGCTGGCCGGCATCACCGGCTCGGCGTCGG GTGGCATGAGCATTGCGCTCGCAGCCATGGGCGACACGTTCATCCAGGGCGCGCAGGCGGCGGGCATTCCGATGGAGGTG CTGCACCGCGTGGTGTCGATGGCGAGCGGCGGCATGGACACGCTGCCGCACAACGGCGCGGTGATCACGCTGCTGGCCGT GACCGGCCTTACCCACCGCGACTCGTATCGCGACATCTTCGCCGTCACGACGATCAAGACGCTGGCGGTGTTCTTCGTCA TCCTGGTCTACTACATGACCGGCCTGGTCTGA
Upstream 100 bases:
>100_bases CGTTGGCCGTGTGTTCTGCAACAGATGTAAGTGACCGAGCGCGCTCACGCGCCGGCACCTATATTTCCCCCAGACCAAGA ACAATCCTCGCGGAGACTTC
Downstream 100 bases:
>100_bases CCGTTCCGAACGTTTCCAACGTTTCCCGCAATTCCTGAATCCGCATTGCCATGAATACCCTGAACGGAAAGACCGCGCTC GTGACCGGTTCCACGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MSFVIVVAALAFLMLAAYRGYSVILFAPLAALGAVLLTDPSAVAPAFTGIFMEKMVGFVKLYFPVFLLGAVFGKVIELSG YSRSIVAAAIRYIGSSRANAVIVAVCALLTYGGVSLFVVVFAVYPFAAELYRQSNIPKRLMPGAIALGAFSFTMDSLPGT PQIQNIIPTTFFKTTAWAAPVLGVAGALFIIVVGLSYLEWRRRAAMAKGEGYGTSLLNEPEPIETAQLPNPLLAIAPLVL VGVSNFVLTRMIPQWYGTTAGLELPGLAKPVTVPVASVVAIWAVEGALLLGILLVVVTAFGTVRQRFAEGSKAAVGGALL AAMNTASEYGFGGVIAALPGFLVVGDALHSIPNPLVNAAVSVSALAGITGSASGGMSIALAAMGDTFIQGAQAAGIPMEV LHRVVSMASGGMDTLPHNGAVITLLAVTGLTHRDSYRDIFAVTTIKTLAVFFVILVYYMTGLV
Sequences:
>Translated_463_residues MSFVIVVAALAFLMLAAYRGYSVILFAPLAALGAVLLTDPSAVAPAFTGIFMEKMVGFVKLYFPVFLLGAVFGKVIELSG YSRSIVAAAIRYIGSSRANAVIVAVCALLTYGGVSLFVVVFAVYPFAAELYRQSNIPKRLMPGAIALGAFSFTMDSLPGT PQIQNIIPTTFFKTTAWAAPVLGVAGALFIIVVGLSYLEWRRRAAMAKGEGYGTSLLNEPEPIETAQLPNPLLAIAPLVL VGVSNFVLTRMIPQWYGTTAGLELPGLAKPVTVPVASVVAIWAVEGALLLGILLVVVTAFGTVRQRFAEGSKAAVGGALL AAMNTASEYGFGGVIAALPGFLVVGDALHSIPNPLVNAAVSVSALAGITGSASGGMSIALAAMGDTFIQGAQAAGIPMEV LHRVVSMASGGMDTLPHNGAVITLLAVTGLTHRDSYRDIFAVTTIKTLAVFFVILVYYMTGLV >Mature_462_residues SFVIVVAALAFLMLAAYRGYSVILFAPLAALGAVLLTDPSAVAPAFTGIFMEKMVGFVKLYFPVFLLGAVFGKVIELSGY SRSIVAAAIRYIGSSRANAVIVAVCALLTYGGVSLFVVVFAVYPFAAELYRQSNIPKRLMPGAIALGAFSFTMDSLPGTP QIQNIIPTTFFKTTAWAAPVLGVAGALFIIVVGLSYLEWRRRAAMAKGEGYGTSLLNEPEPIETAQLPNPLLAIAPLVLV GVSNFVLTRMIPQWYGTTAGLELPGLAKPVTVPVASVVAIWAVEGALLLGILLVVVTAFGTVRQRFAEGSKAAVGGALLA AMNTASEYGFGGVIAALPGFLVVGDALHSIPNPLVNAAVSVSALAGITGSASGGMSIALAAMGDTFIQGAQAAGIPMEVL HRVVSMASGGMDTLPHNGAVITLLAVTGLTHRDSYRDIFAVTTIKTLAVFFVILVYYMTGLV
Specific function: Unknown
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004680 [H]
Pfam domain/function: PF03600 CitMHS [H]
EC number: NA
Molecular weight: Translated: 48085; Mature: 47953
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVIVVAALAFLMLAAYRGYSVILFAPLAALGAVLLTDPSAVAPAFTGIFMEKMVGFVK CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LYFPVFLLGAVFGKVIELSGYSRSIVAAAIRYIGSSRANAVIVAVCALLTYGGVSLFVVV HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHH FAVYPFAAELYRQSNIPKRLMPGAIALGAFSFTMDSLPGTPQIQNIIPTTFFKTTAWAAP HHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHH VLGVAGALFIIVVGLSYLEWRRRAAMAKGEGYGTSLLNEPEPIETAQLPNPLLAIAPLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHCCCCHHHHHHHHHH VGVSNFVLTRMIPQWYGTTAGLELPGLAKPVTVPVASVVAIWAVEGALLLGILLVVVTAF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTVRQRFAEGSKAAVGGALLAAMNTASEYGFGGVIAALPGFLVVGDALHSIPNPLVNAAV HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHCCCHHHHHHH SVSALAGITGSASGGMSIALAAMGDTFIQGAQAAGIPMEVLHRVVSMASGGMDTLPHNGA HHHHHHCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC VITLLAVTGLTHRDSYRDIFAVTTIKTLAVFFVILVYYMTGLV EEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFVIVVAALAFLMLAAYRGYSVILFAPLAALGAVLLTDPSAVAPAFTGIFMEKMVGFVK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LYFPVFLLGAVFGKVIELSGYSRSIVAAAIRYIGSSRANAVIVAVCALLTYGGVSLFVVV HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHH FAVYPFAAELYRQSNIPKRLMPGAIALGAFSFTMDSLPGTPQIQNIIPTTFFKTTAWAAP HHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHH VLGVAGALFIIVVGLSYLEWRRRAAMAKGEGYGTSLLNEPEPIETAQLPNPLLAIAPLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHCCCCHHHHHHHHHH VGVSNFVLTRMIPQWYGTTAGLELPGLAKPVTVPVASVVAIWAVEGALLLGILLVVVTAF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTVRQRFAEGSKAAVGGALLAAMNTASEYGFGGVIAALPGFLVVGDALHSIPNPLVNAAV HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHCCCHHHHHHH SVSALAGITGSASGGMSIALAAMGDTFIQGAQAAGIPMEVLHRVVSMASGGMDTLPHNGA HHHHHHCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC VITLLAVTGLTHRDSYRDIFAVTTIKTLAVFFVILVYYMTGLV EEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10568751 [H]