Click here to switch to the map view.

The map label for this gene is dadA3 [H]

Identifier: 73537561

GI number: 73537561

Start: 317825

End: 319075

Strand: Direct

Name: dadA3 [H]

Synonym: Reut_B3726

Alternate gene names: 73537561

Gene position: 317825-319075 (Clockwise)

Preceding gene: 73537560

Following gene: 73537563

Centisome position: 11.66

GC content: 64.99

Gene sequence:

>1251_bases
ATGTCTCACATGCTCGTCATCGGCGCCGGCATTACCGGCGTCACGACCGCCTATACCCTCGCGAAACTCGGCTATCGCGT
CACCGTACTGGACCGCCAAGACTATCCGGCGATGGAAACGTCTTTCGCCAACGGCGGACAGCTTTCCGCCTGCAATGCCG
AGGTCTGGAACAACGCCGGCACGCTGCTCAAGGGCCTGAAATGGATGATGAAGCGCGATGCGCCGCTGCTGCTGAATCCG
CGTCCATCGTGGCACAAGTATTCGTGGCTCGGCGAATTCGTCGGGCACCTGCGCGGCTATCGCGCCAACACGATCGAAAC
CACGCGGCTGGCCATTGCCGCGCGCGAGCACCTGTTCGCAATGGCCGAGCGCGAGCAGATCGATTTCAATCTCGAGCGCC
GCGGCATCCTGCACTTCTATCACGACCGCCCGAGCTTCGACGCCGCGGGCCGCACCAACCGGATGCTGATGGAGGGCGGG
CTGGAACGCTACGCCGTCACGCCGGAAGAGATTCGCACCATCGAGCCCACGCTGCAGGGCAGCTACTACGGCGGCTACTA
CACGCCGTCCGATTCCACCGGTGATATCCACAAGTTCACGCGCGGCCTGGCCCGTGCTTGCGAGCGGCTCGGCGTGACGT
TCGTGCACGGCGTCGATGTGAAGGCCGTGGACCAGCGCTCCGATGGCGTGGTGATGCGCGTGGCGGCGTCGGAAGCCGCC
GTAGCCGCAGGTCAGGATGGCGGCGAGCGCGAGATCAAGGGGACGGCAGTCGTGGTGTGCGCTGGCGTGGGCAGTCGCCA
TATCGCTGCCATGCTGGGGGATCGGCTAAACGTGTATCCGGTCAAGGGCTACTCGATCACCGTGCATCTCGATGACGTGC
GCAGCGTGAACAATGCGCCGTACGTGAGTTTGCTCGACGAAAGCGCCAAGATCGTGACCAGCCGGCTCGGTGCCGACCGC
TTCCGCGTGGCGGGCACGGCGGAATTCAACGGCCACAATCGCGATATCCGCGCCGATCGCATCGCGCCGCTGGTGTCGTG
GGTGCGGCGCAATTTCGATATCGAAACCTCGCGCGCGGTACCCTGGGCAGGGCTGCGGCCGATGATGCCGGACATGATGC
CGCGTGTTGCGCGTGGCCGTGCTGCCAGGGTCTTCTACAACACAGGGCACGGCCATCTGGGCTGGACGCTGTCGGCCGCG
ACGGCGACGATGATCGGCCAGACCATCGCAACAAGCCATCCCGTCCACTGA

Upstream 100 bases:

>100_bases
ACGGCATGGCCTGGCCATGTCCAAGCTCTCAGGTACCGCGGACAGATGGGGCAGGGGACCGGCAACGGTCAAATTTATCC
TTGCTTCAGGACAATCTGTC

Downstream 100 bases:

>100_bases
CCGCGCTCAGGACTCCGCCGTGCCGGCCGGTGCGATGCGCCCGGCCGCGCGGTGCGCCACGAGCTTCTTGTAGAACGCGG
CGCGGCTGATGCCGATGGCC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSHMLVIGAGITGVTTAYTLAKLGYRVTVLDRQDYPAMETSFANGGQLSACNAEVWNNAGTLLKGLKWMMKRDAPLLLNP
RPSWHKYSWLGEFVGHLRGYRANTIETTRLAIAAREHLFAMAEREQIDFNLERRGILHFYHDRPSFDAAGRTNRMLMEGG
LERYAVTPEEIRTIEPTLQGSYYGGYYTPSDSTGDIHKFTRGLARACERLGVTFVHGVDVKAVDQRSDGVVMRVAASEAA
VAAGQDGGEREIKGTAVVVCAGVGSRHIAAMLGDRLNVYPVKGYSITVHLDDVRSVNNAPYVSLLDESAKIVTSRLGADR
FRVAGTAEFNGHNRDIRADRIAPLVSWVRRNFDIETSRAVPWAGLRPMMPDMMPRVARGRAARVFYNTGHGHLGWTLSAA
TATMIGQTIATSHPVH

Sequences:

>Translated_416_residues
MSHMLVIGAGITGVTTAYTLAKLGYRVTVLDRQDYPAMETSFANGGQLSACNAEVWNNAGTLLKGLKWMMKRDAPLLLNP
RPSWHKYSWLGEFVGHLRGYRANTIETTRLAIAAREHLFAMAEREQIDFNLERRGILHFYHDRPSFDAAGRTNRMLMEGG
LERYAVTPEEIRTIEPTLQGSYYGGYYTPSDSTGDIHKFTRGLARACERLGVTFVHGVDVKAVDQRSDGVVMRVAASEAA
VAAGQDGGEREIKGTAVVVCAGVGSRHIAAMLGDRLNVYPVKGYSITVHLDDVRSVNNAPYVSLLDESAKIVTSRLGADR
FRVAGTAEFNGHNRDIRADRIAPLVSWVRRNFDIETSRAVPWAGLRPMMPDMMPRVARGRAARVFYNTGHGHLGWTLSAA
TATMIGQTIATSHPVH
>Mature_415_residues
SHMLVIGAGITGVTTAYTLAKLGYRVTVLDRQDYPAMETSFANGGQLSACNAEVWNNAGTLLKGLKWMMKRDAPLLLNPR
PSWHKYSWLGEFVGHLRGYRANTIETTRLAIAAREHLFAMAEREQIDFNLERRGILHFYHDRPSFDAAGRTNRMLMEGGL
ERYAVTPEEIRTIEPTLQGSYYGGYYTPSDSTGDIHKFTRGLARACERLGVTFVHGVDVKAVDQRSDGVVMRVAASEAAV
AAGQDGGEREIKGTAVVVCAGVGSRHIAAMLGDRLNVYPVKGYSITVHLDDVRSVNNAPYVSLLDESAKIVTSRLGADRF
RVAGTAEFNGHNRDIRADRIAPLVSWVRRNFDIETSRAVPWAGLRPMMPDMMPRVARGRAARVFYNTGHGHLGWTLSAAT
ATMIGQTIATSHPVH

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=418, Percent_Identity=31.3397129186603, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45817; Mature: 45686

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHMLVIGAGITGVTTAYTLAKLGYRVTVLDRQDYPAMETSFANGGQLSACNAEVWNNAG
CCCEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCCCHHCCCCCCCCEEECCHHHHCCHH
TLLKGLKWMMKRDAPLLLNPRPSWHKYSWLGEFVGHLRGYRANTIETTRLAIAAREHLFA
HHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH
MAEREQIDFNLERRGILHFYHDRPSFDAAGRTNRMLMEGGLERYAVTPEEIRTIEPTLQG
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCHHCCCCHHHHHEECCCCCC
SYYGGYYTPSDSTGDIHKFTRGLARACERLGVTFVHGVDVKAVDQRSDGVVMRVAASEAA
CCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCEEEEEECCCHH
VAAGQDGGEREIKGTAVVVCAGVGSRHIAAMLGDRLNVYPVKGYSITVHLDDVRSVNNAP
EECCCCCCCCEECCEEEEEEECCCCHHHHHHHCCCCEEEEECCEEEEEEEHHHHCCCCCC
YVSLLDESAKIVTSRLGADRFRVAGTAEFNGHNRDIRADRIAPLVSWVRRNFDIETSRAV
EEEEECCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PWAGLRPMMPDMMPRVARGRAARVFYNTGHGHLGWTLSAATATMIGQTIATSHPVH
CCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SHMLVIGAGITGVTTAYTLAKLGYRVTVLDRQDYPAMETSFANGGQLSACNAEVWNNAG
CCEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCCCHHCCCCCCCCEEECCHHHHCCHH
TLLKGLKWMMKRDAPLLLNPRPSWHKYSWLGEFVGHLRGYRANTIETTRLAIAAREHLFA
HHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH
MAEREQIDFNLERRGILHFYHDRPSFDAAGRTNRMLMEGGLERYAVTPEEIRTIEPTLQG
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCHHCCCCHHHHHEECCCCCC
SYYGGYYTPSDSTGDIHKFTRGLARACERLGVTFVHGVDVKAVDQRSDGVVMRVAASEAA
CCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCEEEEEECCCHH
VAAGQDGGEREIKGTAVVVCAGVGSRHIAAMLGDRLNVYPVKGYSITVHLDDVRSVNNAP
EECCCCCCCCEECCEEEEEEECCCCHHHHHHHCCCCEEEEECCEEEEEEEHHHHCCCCCC
YVSLLDESAKIVTSRLGADRFRVAGTAEFNGHNRDIRADRIAPLVSWVRRNFDIETSRAV
EEEEECCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PWAGLRPMMPDMMPRVARGRAARVFYNTGHGHLGWTLSAATATMIGQTIATSHPVH
CCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]