| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is gudP [H]
Identifier: 73537524
GI number: 73537524
Start: 273554
End: 274930
Strand: Direct
Name: gudP [H]
Synonym: Reut_B3689
Alternate gene names: 73537524
Gene position: 273554-274930 (Clockwise)
Preceding gene: 73537522
Following gene: 73537525
Centisome position: 10.03
GC content: 65.0
Gene sequence:
>1377_bases ATGAACGCAAGCCCCACTTCCACCTCGACGACCGCAGCCGGCAGCGCAGCCACCGCGCGCCGCACCAACATCCGTTACTG GATCCTGGCGATGATCTTCATCGTCACCACGGTCAACTATGCCGACCGCGCCACGCTGTCGATCACGGGCCCCGCCATGC GCGAGGCCTTCGGTTTCAGCGCCGTGCAGATGGGCTATATCTTCTCGGCCTTCAGCTGGGCCTATGTCATGGCACAGATT CCGGGCGGCTGGCTGCTTGACCGCTTTGGCGCGCGCCGAATCTATGCGGCCAGTATCTGCCTGTGGTCGGTGTTCACGCT CCTGCAGGGCTGGGTGGGTGTGTTCGCCTCCATGGGCGCGGTGATGACCGTGCTGTTCATGTTGCGCTTTGCCGTGGGCC TGGCCGAGTCCCCCGCATTTCCGGCCAATGCCAAGGTGGTCGCGAGCTGGTTCCCCACGTCGGAGCGCGGCACGGCGTCG GCCATCTTCAACGCGGCGCAGTACTTCGCGGCCGTGGTGTTCACGCCGCTGATGGCATGGGTCACGCATAGCTGGGGCTG GCACCACGTCTATCTGTGGATGGGCGTGATCGGCATGGCGCTGGCCTTGCTGTGGCTCAAGGTCATGCGTAGCCCAGCCG ACCATCCCGCGGTCAATCGCGCGGAACTCGAGCACATCGAGCAGGGCGGCGGCCTGATCCACATGAACGAAGGCGCGGCG CGCGGTGCCGGCAAGGCCGCGGCGCCGGCGGGCTGGTTCTATGCACGCCAGCTGCTGAGCAACCGCATGCTGGCCGGCGT CTACCTGGGCCAGTACTGCATCAACGTGCTGACCTATTTCTTCCTGACCTGGTTTCCGGTGTACCTGGTGCAGGCGCGCG GCATGTCGATCCTCAAGGCAGGTTTCGTGGCGTCGCTGCCGGCAATCTGCGGCTTCCTTGGCGGCGTGCTGGGCGGCATG ATTTCCGACGCGCTGCTGCGCCGCGGCCATACGCTGACTGTCGCCCGCAAGGTGCCCATCGTGGCCGGCATGCTGCTGTC GGTCAGCATGATCGCCTGCAACTATGTCGATGCCGAATGGCTCGTCGTCGGCTTCATGGCGCTGGCCTTCTTCGGCAAGG GCATCGGCGCGCTGGGCTGGGCCGTCGTGGCGGATACCGCGCCCAAGGAAGTGATCGGCCTGGCGGGCAGCATCTTCAAT ACGTTCGGCAATATCGCCGGCATCGTTACGCCGATCGCGATCGGCTATATCCTGAGCGTCACCGGCTCCTTCAACGGCGC GCTGGTGTTCGTCGGAGTCCATGCACTGGTCACGGTGCTGAGCTACCTGGTGATCGTCAAGGACATTCGCCGCGTGGAAC TCAGGCACCCGCAATAA
Upstream 100 bases:
>100_bases CACTACGATGCCCCGATCCGATCCCTATAATCTCAGTCATACGACGACATATCTCAATCCGCCTTTTGCCGTGTGGCAAG CAGGGCCATGAGGAGACCTG
Downstream 100 bases:
>100_bases CCGCAGGAAGCACAAGCATGTCAGAACACGATTCGCAGGCAGTCAAGGCGCCGCTCTATATCCGCATCCATCCCGAGGAC AACGTGGCCATCGTCGCGAA
Product: D-galactonate transporter
Products: NA
Alternate protein names: D-glucarate permease [H]
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MNASPTSTSTTAAGSAATARRTNIRYWILAMIFIVTTVNYADRATLSITGPAMREAFGFSAVQMGYIFSAFSWAYVMAQI PGGWLLDRFGARRIYAASICLWSVFTLLQGWVGVFASMGAVMTVLFMLRFAVGLAESPAFPANAKVVASWFPTSERGTAS AIFNAAQYFAAVVFTPLMAWVTHSWGWHHVYLWMGVIGMALALLWLKVMRSPADHPAVNRAELEHIEQGGGLIHMNEGAA RGAGKAAAPAGWFYARQLLSNRMLAGVYLGQYCINVLTYFFLTWFPVYLVQARGMSILKAGFVASLPAICGFLGGVLGGM ISDALLRRGHTLTVARKVPIVAGMLLSVSMIACNYVDAEWLVVGFMALAFFGKGIGALGWAVVADTAPKEVIGLAGSIFN TFGNIAGIVTPIAIGYILSVTGSFNGALVFVGVHALVTVLSYLVIVKDIRRVELRHPQ
Sequences:
>Translated_458_residues MNASPTSTSTTAAGSAATARRTNIRYWILAMIFIVTTVNYADRATLSITGPAMREAFGFSAVQMGYIFSAFSWAYVMAQI PGGWLLDRFGARRIYAASICLWSVFTLLQGWVGVFASMGAVMTVLFMLRFAVGLAESPAFPANAKVVASWFPTSERGTAS AIFNAAQYFAAVVFTPLMAWVTHSWGWHHVYLWMGVIGMALALLWLKVMRSPADHPAVNRAELEHIEQGGGLIHMNEGAA RGAGKAAAPAGWFYARQLLSNRMLAGVYLGQYCINVLTYFFLTWFPVYLVQARGMSILKAGFVASLPAICGFLGGVLGGM ISDALLRRGHTLTVARKVPIVAGMLLSVSMIACNYVDAEWLVVGFMALAFFGKGIGALGWAVVADTAPKEVIGLAGSIFN TFGNIAGIVTPIAIGYILSVTGSFNGALVFVGVHALVTVLSYLVIVKDIRRVELRHPQ >Mature_458_residues MNASPTSTSTTAAGSAATARRTNIRYWILAMIFIVTTVNYADRATLSITGPAMREAFGFSAVQMGYIFSAFSWAYVMAQI PGGWLLDRFGARRIYAASICLWSVFTLLQGWVGVFASMGAVMTVLFMLRFAVGLAESPAFPANAKVVASWFPTSERGTAS AIFNAAQYFAAVVFTPLMAWVTHSWGWHHVYLWMGVIGMALALLWLKVMRSPADHPAVNRAELEHIEQGGGLIHMNEGAA RGAGKAAAPAGWFYARQLLSNRMLAGVYLGQYCINVLTYFFLTWFPVYLVQARGMSILKAGFVASLPAICGFLGGVLGGM ISDALLRRGHTLTVARKVPIVAGMLLSVSMIACNYVDAEWLVVGFMALAFFGKGIGALGWAVVADTAPKEVIGLAGSIFN TFGNIAGIVTPIAIGYILSVTGSFNGALVFVGVHALVTVLSYLVIVKDIRRVELRHPQ
Specific function: Uptake of D-glucarate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI9966811, Length=388, Percent_Identity=26.2886597938144, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI21322234, Length=397, Percent_Identity=27.2040302267003, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI9945322, Length=369, Percent_Identity=26.5582655826558, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI6912666, Length=409, Percent_Identity=25.1833740831296, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI4885441, Length=385, Percent_Identity=23.6363636363636, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI5031955, Length=319, Percent_Identity=23.8244514106583, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI148743791, Length=404, Percent_Identity=24.2574257425743, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI223718438, Length=196, Percent_Identity=30.1020408163265, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI154350196, Length=425, Percent_Identity=22.1176470588235, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI148728191, Length=330, Percent_Identity=23.9393939393939, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI256219598, Length=394, Percent_Identity=22.0812182741117, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4503847, Length=394, Percent_Identity=22.0812182741117, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI256219483, Length=394, Percent_Identity=22.0812182741117, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI256219543, Length=300, Percent_Identity=23.6666666666667, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1789152, Length=447, Percent_Identity=62.8635346756152, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI1789515, Length=437, Percent_Identity=57.20823798627, Blast_Score=525, Evalue=1e-150, Organism=Escherichia coli, GI87082320, Length=439, Percent_Identity=39.8633257403189, Blast_Score=342, Evalue=4e-95, Organism=Escherichia coli, GI2367379, Length=433, Percent_Identity=29.5612009237875, Blast_Score=185, Evalue=7e-48, Organism=Escherichia coli, GI2367193, Length=326, Percent_Identity=27.3006134969325, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1788573, Length=465, Percent_Identity=24.7311827956989, Blast_Score=89, Evalue=5e-19, Organism=Caenorhabditis elegans, GI115533556, Length=439, Percent_Identity=27.3348519362187, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI115533554, Length=442, Percent_Identity=26.9230769230769, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17560030, Length=366, Percent_Identity=23.7704918032787, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17552542, Length=416, Percent_Identity=24.5192307692308, Blast_Score=88, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17535049, Length=419, Percent_Identity=23.1503579952267, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193205400, Length=287, Percent_Identity=22.6480836236934, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI32565916, Length=266, Percent_Identity=21.4285714285714, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI32565914, Length=266, Percent_Identity=21.4285714285714, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71991453, Length=385, Percent_Identity=21.2987012987013, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71991448, Length=385, Percent_Identity=21.2987012987013, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI25151055, Length=249, Percent_Identity=22.0883534136546, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17554148, Length=364, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193208223, Length=296, Percent_Identity=26.0135135135135, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71997452, Length=383, Percent_Identity=23.2375979112272, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17562692, Length=330, Percent_Identity=21.8181818181818, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17570335, Length=247, Percent_Identity=22.6720647773279, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71983953, Length=271, Percent_Identity=23.6162361623616, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI193207426, Length=296, Percent_Identity=23.3108108108108, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17537329, Length=276, Percent_Identity=24.6376811594203, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24641682, Length=397, Percent_Identity=25.1889168765743, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI45550460, Length=421, Percent_Identity=26.1282660332542, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24639764, Length=412, Percent_Identity=27.1844660194175, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24583789, Length=404, Percent_Identity=25, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24648416, Length=443, Percent_Identity=24.3792325056433, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI21356189, Length=443, Percent_Identity=24.3792325056433, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24655255, Length=381, Percent_Identity=26.246719160105, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24654215, Length=377, Percent_Identity=26.790450928382, Blast_Score=98, Evalue=9e-21, Organism=Drosophila melanogaster, GI19922400, Length=421, Percent_Identity=26.1282660332542, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI28573708, Length=453, Percent_Identity=24.9448123620309, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573707, Length=453, Percent_Identity=24.9448123620309, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24584153, Length=410, Percent_Identity=24.8780487804878, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI28573299, Length=330, Percent_Identity=23.3333333333333, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24580790, Length=410, Percent_Identity=23.9024390243902, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI62484226, Length=359, Percent_Identity=25.3481894150418, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24655271, Length=412, Percent_Identity=22.0873786407767, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI20130135, Length=412, Percent_Identity=22.0873786407767, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI20130167, Length=408, Percent_Identity=23.0392156862745, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI20129235, Length=391, Percent_Identity=25.0639386189258, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24658658, Length=415, Percent_Identity=23.6144578313253, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45550364, Length=448, Percent_Identity=24.7767857142857, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24653727, Length=429, Percent_Identity=24.2424242424242, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24658666, Length=389, Percent_Identity=23.1362467866324, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19920686, Length=419, Percent_Identity=22.673031026253, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24658674, Length=414, Percent_Identity=22.463768115942, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49256; Mature: 49256
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASPTSTSTTAAGSAATARRTNIRYWILAMIFIVTTVNYADRATLSITGPAMREAFGFS CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHCHH AVQMGYIFSAFSWAYVMAQIPGGWLLDRFGARRIYAASICLWSVFTLLQGWVGVFASMGA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMTVLFMLRFAVGLAESPAFPANAKVVASWFPTSERGTASAIFNAAQYFAAVVFTPLMAW HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VTHSWGWHHVYLWMGVIGMALALLWLKVMRSPADHPAVNRAELEHIEQGGGLIHMNEGAA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCCC RGAGKAAAPAGWFYARQLLSNRMLAGVYLGQYCINVLTYFFLTWFPVYLVQARGMSILKA CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GFVASLPAICGFLGGVLGGMISDALLRRGHTLTVARKVPIVAGMLLSVSMIACNYVDAEW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHH LVVGFMALAFFGKGIGALGWAVVADTAPKEVIGLAGSIFNTFGNIAGIVTPIAIGYILSV HHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGSFNGALVFVGVHALVTVLSYLVIVKDIRRVELRHPQ CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNASPTSTSTTAAGSAATARRTNIRYWILAMIFIVTTVNYADRATLSITGPAMREAFGFS CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHCHH AVQMGYIFSAFSWAYVMAQIPGGWLLDRFGARRIYAASICLWSVFTLLQGWVGVFASMGA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMTVLFMLRFAVGLAESPAFPANAKVVASWFPTSERGTASAIFNAAQYFAAVVFTPLMAW HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VTHSWGWHHVYLWMGVIGMALALLWLKVMRSPADHPAVNRAELEHIEQGGGLIHMNEGAA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCCC RGAGKAAAPAGWFYARQLLSNRMLAGVYLGQYCINVLTYFFLTWFPVYLVQARGMSILKA CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GFVASLPAICGFLGGVLGGMISDALLRRGHTLTVARKVPIVAGMLLSVSMIACNYVDAEW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHH LVVGFMALAFFGKGIGALGWAVVADTAPKEVIGLAGSIFNTFGNIAGIVTPIAIGYILSV HHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGSFNGALVFVGVHALVTVLSYLVIVKDIRRVELRHPQ CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 9772162; 10762278 [H]