| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is dsbE [C]
Identifier: 73542933
GI number: 73542933
Start: 3564363
End: 3564860
Strand: Reverse
Name: dsbE [C]
Synonym: Reut_A3250
Alternate gene names: 73542933
Gene position: 3564860-3564363 (Counterclockwise)
Preceding gene: 73542934
Following gene: 73542932
Centisome position: 93.65
GC content: 67.87
Gene sequence:
>498_bases ATGCTGCGCGTCCGTTCATCGCTCATCGCGTGGCTGCTGGCTTTCGGCCTGATGGCCGGTGCCGGCGGCGCCCGCGCGCT GGAGGTGGGCGACACGGTGCGCCTGCCCGATGTGCAGACGCTGGACGGACGCACGCTGACCGCTGCATCGCTTGCCGGCA AGCCGTTGATCGTCGAGGTATGGGCGTCGTGGTGCCCGTTCTGCGCCATGCAGAACCCGCGCCTGCAGAAGCTCTACGAA CGCACGCGCGGCACGCGACTGCAGGTGCTGACCATCAGCATCGACAAGGATCCGCGCGAGGCAACCGAGTACCTGCGCAA GCGCGGCTACACCTTCCCGGTCACCATGGACTCGCCGGCACTGCGTACGGCAATCAGCCCGCGCAAGGGCCTGCCGGAGC TGTACGTGATCGATGCACGCGGGCGCGTGGTGCAGAAGGAAGTGGGCGAGATGCTCGAAGACGAAGTCGCGGCGCTCGAC CGCTACGCCAAGCCCTGA
Upstream 100 bases:
>100_bases GCGCTTCGGCCACAAGGGCATCCTGACCGAAGCGCAGATTCGCGACGTGATGGCGCTGCTGCTGGACCCGGCTTCGCCGG TCAACCAGTAAGGGCACGGC
Downstream 100 bases:
>100_bases ATTACGCCTTGCCGCGTGTGCCAACGTTTATCGGCGCGCGGCCAACATGAAACCGATGCCGGAAGCGCCTTGCATGCCCT GCACGGCGCCCACCGGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: Redoxin Domain Protein; Thioredoxin Family Protein; Cytochrome C Biogenesis Protein; Thioredoxin; Redoxin; ThiolDisulfide Interchange Protein; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase-Like Protein; Thioredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins; Thiol-Disulfide Isomerase-Like Thioredoxin; Antioxidant AhpC/TSA Family; Thioredoxin Signature Protein; ThiolDisulfide Interchange Protein TlpA; Redoxin Protein; Thiol-Disulfide Oxidoreductase; Thioredoxin-Like; Peroxiredoxin; AhpC/TSA Family Protein; Thioredoxin Fold Harboring Protein; TlpA Family-Like Protein Disulfide Reductase Lipoprotein; AhpC/TSA Family; Disulfite Reductase/Thioredoxin SoxW Homolog
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLRVRSSLIAWLLAFGLMAGAGGARALEVGDTVRLPDVQTLDGRTLTAASLAGKPLIVEVWASWCPFCAMQNPRLQKLYE RTRGTRLQVLTISIDKDPREATEYLRKRGYTFPVTMDSPALRTAISPRKGLPELYVIDARGRVVQKEVGEMLEDEVAALD RYAKP
Sequences:
>Translated_165_residues MLRVRSSLIAWLLAFGLMAGAGGARALEVGDTVRLPDVQTLDGRTLTAASLAGKPLIVEVWASWCPFCAMQNPRLQKLYE RTRGTRLQVLTISIDKDPREATEYLRKRGYTFPVTMDSPALRTAISPRKGLPELYVIDARGRVVQKEVGEMLEDEVAALD RYAKP >Mature_165_residues MLRVRSSLIAWLLAFGLMAGAGGARALEVGDTVRLPDVQTLDGRTLTAASLAGKPLIVEVWASWCPFCAMQNPRLQKLYE RTRGTRLQVLTISIDKDPREATEYLRKRGYTFPVTMDSPALRTAISPRKGLPELYVIDARGRVVQKEVGEMLEDEVAALD RYAKP
Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18332; Mature: 18332
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRVRSSLIAWLLAFGLMAGAGGARALEVGDTVRLPDVQTLDGRTLTAASLAGKPLIVEV CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCEEEHHHHCCCCHHHHH WASWCPFCAMQNPRLQKLYERTRGTRLQVLTISIDKDPREATEYLRKRGYTFPVTMDSPA HHHHCCHHHCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCCCEEEEEECCHH LRTAISPRKGLPELYVIDARGRVVQKEVGEMLEDEVAALDRYAKP HHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLRVRSSLIAWLLAFGLMAGAGGARALEVGDTVRLPDVQTLDGRTLTAASLAGKPLIVEV CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCEEEHHHHCCCCHHHHH WASWCPFCAMQNPRLQKLYERTRGTRLQVLTISIDKDPREATEYLRKRGYTFPVTMDSPA HHHHCCHHHCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCCCEEEEEECCHH LRTAISPRKGLPELYVIDARGRVVQKEVGEMLEDEVAALDRYAKP HHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA