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The map label for this gene is bkdR [H]

Identifier: 73542900

GI number: 73542900

Start: 3528932

End: 3529423

Strand: Reverse

Name: bkdR [H]

Synonym: Reut_A3216

Alternate gene names: 73542900

Gene position: 3529423-3528932 (Counterclockwise)

Preceding gene: 73542901

Following gene: 73542898

Centisome position: 92.72

GC content: 64.43

Gene sequence:

>492_bases
GTGAGCAAGGTGGAGTTGGACAAGATCGACCGGAAGATCCTGGAGGTCCTGCAGACCAACGGCCGGTTGACCAACCTGGA
GGTGGCCGAGCGCGTGAACCTGTCGCCGAGTCCGTGCTTGCGGCGTATCCGCAGGCTGGAGGAGATCGGCGTGATCCGCC
AGTACGCGGCGCTGCTCGAGCCCGGCAAGATCGGCCTGGGCCTGCTGGCCTATATCAATGTGCGGCTGGAAAAGCACGGC
GGCGCACCGAAGGGCAAGGCGCCGCTCGATCTGTTCCGCGCGGCCATCGGCACCTGGCCGGAAGTCGCGGCGTGCCATGC
CATGACGGGCGAAATGGACCTGCTGCTCAAGGTCTATGTCGAGGACATGGAACACTTTGCGCGCTTCATGCAAGAGCAGT
TGCTGGCGCACCCGTCCGTGATCGACGTTCGCTCCAGCTTTGCGCTGGAAAGCATCAAGGACACCACCGCATTGCCGGTG
GCCGGGGGCTGA

Upstream 100 bases:

>100_bases
TCAAATCTGACGGATTCCACAAAAAATTGCGTACTTGTGCACAACTTGCTAAATTTGCGCAAAAAAATTGCCAATAAACA
TATTGCGGAGCAACGAAATC

Downstream 100 bases:

>100_bases
GCGCGCGGCCAAAACAAAAACGGCGCATCGTCACGATGCGCCGTCTGGCGTGGGGCCGGTGTCAGGCCGGGCCGCGGTGA
TATCAGGCGGTGCGCTTCTG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSKVELDKIDRKILEVLQTNGRLTNLEVAERVNLSPSPCLRRIRRLEEIGVIRQYAALLEPGKIGLGLLAYINVRLEKHG
GAPKGKAPLDLFRAAIGTWPEVAACHAMTGEMDLLLKVYVEDMEHFARFMQEQLLAHPSVIDVRSSFALESIKDTTALPV
AGG

Sequences:

>Translated_163_residues
MSKVELDKIDRKILEVLQTNGRLTNLEVAERVNLSPSPCLRRIRRLEEIGVIRQYAALLEPGKIGLGLLAYINVRLEKHG
GAPKGKAPLDLFRAAIGTWPEVAACHAMTGEMDLLLKVYVEDMEHFARFMQEQLLAHPSVIDVRSSFALESIKDTTALPV
AGG
>Mature_162_residues
SKVELDKIDRKILEVLQTNGRLTNLEVAERVNLSPSPCLRRIRRLEEIGVIRQYAALLEPGKIGLGLLAYINVRLEKHGG
APKGKAPLDLFRAAIGTWPEVAACHAMTGEMDLLLKVYVEDMEHFARFMQEQLLAHPSVIDVRSSFALESIKDTTALPVA
GG

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=156, Percent_Identity=39.7435897435897, Blast_Score=122, Evalue=8e-30,
Organism=Escherichia coli, GI87081742, Length=155, Percent_Identity=40.6451612903226, Blast_Score=119, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18042; Mature: 17911

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVELDKIDRKILEVLQTNGRLTNLEVAERVNLSPSPCLRRIRRLEEIGVIRQYAALLE
CCCCHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PGKIGLGLLAYINVRLEKHGGAPKGKAPLDLFRAAIGTWPEVAACHAMTGEMDLLLKVYV
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH
EDMEHFARFMQEQLLAHPSVIDVRSSFALESIKDTTALPVAGG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKVELDKIDRKILEVLQTNGRLTNLEVAERVNLSPSPCLRRIRRLEEIGVIRQYAALLE
CCCHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PGKIGLGLLAYINVRLEKHGGAPKGKAPLDLFRAAIGTWPEVAACHAMTGEMDLLLKVYV
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH
EDMEHFARFMQEQLLAHPSVIDVRSSFALESIKDTTALPVAGG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]