Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73542816
Identifier: 73542816
GI number: 73542816
Start: 3443151
End: 3443687
Strand: Reverse
Name: 73542816
Synonym: Reut_A3132
Alternate gene names: NA
Gene position: 3443687-3443151 (Counterclockwise)
Preceding gene: 73542817
Following gene: 73542815
Centisome position: 90.47
GC content: 63.69
Gene sequence:
>537_bases ATGAGCCGCACCGTGAGCCTTTCCATGCGTCGTCTGGGCCTGCTTGCCGCCGCGCTGGCTGCCGGACTGCTGAGCGCGTG CGGTTCCGGCGACGAACAGGCGCTGCGGCAGTGGATGGATGCCACGCGCAACGCCAAAGCCCAGCCGCCCGCGCCCTTGC CCGAACCCAAGCCCTATGTGCCGCGCGAATACGCGGGGCGCAGCGCGCCGGAGCCGTTCGCGCAGACCAAGATCGGCGAA CTCAACAAGATGCTGGCGGAGTCGCCCGAAGCCGGGCGTCGCCGCGAGCCGCTCGAAGACTATCCGCTCGAAAACTTCAA GATGCTCGGCATGATGAAGAAGAACGGCGAGACCTTCGGCATCGTGCGTGTTGATAACAAGATCCACCACGTCAAGGTGG GTCAGTATCTCGGCCAGAGTTACGGCCGGGTGGTCCGCATCACCGATCAGGAGATCGTGTTGCGCGAATTGGTCCGGGAA GGGGTATCCGAGTGGAAAGAGAAAATGACCAGCCTGAAGCTGGAGGTGTCGGCATGA
Upstream 100 bases:
>100_bases TGGAAGCGGTGGCGATGGCCTACCGCACCCTGGACCCGGACGAGCAGGCCGCGCAACGCAAGGCTGCCGCCAATGCCGCC AGGCCCGCCGGAGGTGCCAA
Downstream 100 bases:
>100_bases CCCTGGGTCGCTGGTACCGAGCGCTTGCAGGCGCAATGACGATGACACTTGTGCTGGCCGCCCCGGCGGCGCTCGCACAG GGCAACCAGGTGAAGTCGGT
Product: pilus assembly protein, PilQ
Products: NA
Alternate protein names: Pilus Assembly Protein PilQ; Type IV Pilus Assembly Protein PilP; Type IV Pilus Biogenesis Protein PilP; Type 4 Fimbrial Biogenesis Protein PilP; Lipoprotein; Pilus Assembly Protein; Type IV Pilus Assembly Protein Pilp; Pilus Assembly Protein Pilp; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-4 Assembly Lipoprotein; Fimbrial Assembly Protein; Type IV Fimbrial Biogenesis Protein PilP; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Assembly Protein
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSRTVSLSMRRLGLLAAALAAGLLSACGSGDEQALRQWMDATRNAKAQPPAPLPEPKPYVPREYAGRSAPEPFAQTKIGE LNKMLAESPEAGRRREPLEDYPLENFKMLGMMKKNGETFGIVRVDNKIHHVKVGQYLGQSYGRVVRITDQEIVLRELVRE GVSEWKEKMTSLKLEVSA
Sequences:
>Translated_178_residues MSRTVSLSMRRLGLLAAALAAGLLSACGSGDEQALRQWMDATRNAKAQPPAPLPEPKPYVPREYAGRSAPEPFAQTKIGE LNKMLAESPEAGRRREPLEDYPLENFKMLGMMKKNGETFGIVRVDNKIHHVKVGQYLGQSYGRVVRITDQEIVLRELVRE GVSEWKEKMTSLKLEVSA >Mature_177_residues SRTVSLSMRRLGLLAAALAAGLLSACGSGDEQALRQWMDATRNAKAQPPAPLPEPKPYVPREYAGRSAPEPFAQTKIGEL NKMLAESPEAGRRREPLEDYPLENFKMLGMMKKNGETFGIVRVDNKIHHVKVGQYLGQSYGRVVRITDQEIVLRELVREG VSEWKEKMTSLKLEVSA
Specific function: Unknown
COG id: COG3168
COG function: function code NU; Tfp pilus assembly protein PilP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19836; Mature: 19705
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTVSLSMRRLGLLAAALAAGLLSACGSGDEQALRQWMDATRNAKAQPPAPLPEPKPYV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PREYAGRSAPEPFAQTKIGELNKMLAESPEAGRRREPLEDYPLENFKMLGMMKKNGETFG CHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE IVRVDNKIHHVKVGQYLGQSYGRVVRITDQEIVLRELVREGVSEWKEKMTSLKLEVSA EEEECCCCCEEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCEECC >Mature Secondary Structure SRTVSLSMRRLGLLAAALAAGLLSACGSGDEQALRQWMDATRNAKAQPPAPLPEPKPYV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PREYAGRSAPEPFAQTKIGELNKMLAESPEAGRRREPLEDYPLENFKMLGMMKKNGETFG CHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE IVRVDNKIHHVKVGQYLGQSYGRVVRITDQEIVLRELVREGVSEWKEKMTSLKLEVSA EEEECCCCCEEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA