Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73542817
Identifier: 73542817
GI number: 73542817
Start: 3443684
End: 3444352
Strand: Reverse
Name: 73542817
Synonym: Reut_A3133
Alternate gene names: NA
Gene position: 3444352-3443684 (Counterclockwise)
Preceding gene: 73542818
Following gene: 73542816
Centisome position: 90.49
GC content: 64.87
Gene sequence:
>669_bases ATGGCGCTCAATACCGAAATCAACCTGGCGGACCTGACAGGCCAGTTCCGCGGGCTCAATATGAACGAGCCCGAGACTTG GCCCACGGCGCCGCGCGTCGTGTTCGCGCTCATCGCGGCGGCTGTCGTGCTGCTGCTCGGCTGGCAGTTCTACTGGAGCG GCAAGACCGAGGAACTCGACCGCCAGCGCGCGGAACAGGAAAACCTCAAGCAGGCCTACCAGTCAAAGGTCGTCCAGGTC GCCAACCTGGAAGCGCTGCGCGAACAGAAGAAGCAGGTGGAGCTGCGGGTGGCGCAGCTCGAGCGCCAGCTTCCGAACAA GACCGAGATGGACGCGCTGCTCGCCGACGTCAACCACGCCGGCGTGGCGCGCGGTCTGCAGTTTGAGCTGTTCAAGCCGC AGGCTGCGGTGCTCAAGCCTTACTTTGCAGAGATCCCGGTGAACCTGAAGGTGACGGGGCGCTATCACGATGTTGCGCAG TTCAACGCCGACGTCGCCGCGCTGTCCCGGATCGTATCGATGCAGAACCTGCAGCTCGCCAATACCAAGGAAGGCGCGCT GACCATGGAAGCGGTGGCGATGGCCTACCGCACCCTGGACCCGGACGAGCAGGCCGCGCAACGCAAGGCTGCCGCCAATG CCGCCAGGCCCGCCGGAGGTGCCAAATGA
Upstream 100 bases:
>100_bases CGATGCGCTTCGCCTACCGCGCTCCCGAAACGCCTGCCGACAAGAAGAACGGCGCGGCAAGCGCGGCCCAGGCACCGGCC GCTAACGGAAAGGCCTGACC
Downstream 100 bases:
>100_bases GCCGCACCGTGAGCCTTTCCATGCGTCGTCTGGGCCTGCTTGCCGCCGCGCTGGCTGCCGGACTGCTGAGCGCGTGCGGT TCCGGCGACGAACAGGCGCT
Product: pilus assembly protein, PilO
Products: NA
Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Protein PilO; Fimbrial Assembly Membrane Protein; Type IV Pilus Assembly Protein PilO; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Pili Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type 4 Fimbrial Biogenesis Protein; Pilus Assembly Protein PilO-Like
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MALNTEINLADLTGQFRGLNMNEPETWPTAPRVVFALIAAAVVLLLGWQFYWSGKTEELDRQRAEQENLKQAYQSKVVQV ANLEALREQKKQVELRVAQLERQLPNKTEMDALLADVNHAGVARGLQFELFKPQAAVLKPYFAEIPVNLKVTGRYHDVAQ FNADVAALSRIVSMQNLQLANTKEGALTMEAVAMAYRTLDPDEQAAQRKAAANAARPAGGAK
Sequences:
>Translated_222_residues MALNTEINLADLTGQFRGLNMNEPETWPTAPRVVFALIAAAVVLLLGWQFYWSGKTEELDRQRAEQENLKQAYQSKVVQV ANLEALREQKKQVELRVAQLERQLPNKTEMDALLADVNHAGVARGLQFELFKPQAAVLKPYFAEIPVNLKVTGRYHDVAQ FNADVAALSRIVSMQNLQLANTKEGALTMEAVAMAYRTLDPDEQAAQRKAAANAARPAGGAK >Mature_221_residues ALNTEINLADLTGQFRGLNMNEPETWPTAPRVVFALIAAAVVLLLGWQFYWSGKTEELDRQRAEQENLKQAYQSKVVQVA NLEALREQKKQVELRVAQLERQLPNKTEMDALLADVNHAGVARGLQFELFKPQAAVLKPYFAEIPVNLKVTGRYHDVAQF NADVAALSRIVSMQNLQLANTKEGALTMEAVAMAYRTLDPDEQAAQRKAAANAARPAGGAK
Specific function: Unknown
COG id: COG3167
COG function: function code NU; Tfp pilus assembly protein PilO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24571; Mature: 24440
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNTEINLADLTGQFRGLNMNEPETWPTAPRVVFALIAAAVVLLLGWQFYWSGKTEELD CCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHH RQRAEQENLKQAYQSKVVQVANLEALREQKKQVELRVAQLERQLPNKTEMDALLADVNHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH GVARGLQFELFKPQAAVLKPYFAEIPVNLKVTGRYHDVAQFNADVAALSRIVSMQNLQLA HHHCCCEEEEECCHHHHHCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEC NTKEGALTMEAVAMAYRTLDPDEQAAQRKAAANAARPAGGAK CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALNTEINLADLTGQFRGLNMNEPETWPTAPRVVFALIAAAVVLLLGWQFYWSGKTEELD CCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHH RQRAEQENLKQAYQSKVVQVANLEALREQKKQVELRVAQLERQLPNKTEMDALLADVNHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH GVARGLQFELFKPQAAVLKPYFAEIPVNLKVTGRYHDVAQFNADVAALSRIVSMQNLQLA HHHCCCEEEEECCHHHHHCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEC NTKEGALTMEAVAMAYRTLDPDEQAAQRKAAANAARPAGGAK CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA