| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73542748
Identifier: 73542748
GI number: 73542748
Start: 3371378
End: 3373765
Strand: Reverse
Name: 73542748
Synonym: Reut_A3064
Alternate gene names: NA
Gene position: 3373765-3371378 (Counterclockwise)
Preceding gene: 73542750
Following gene: 73542747
Centisome position: 88.63
GC content: 68.59
Gene sequence:
>2388_bases ATGTCGTTTCCCCTGAAGCACACCAGCGCGCTGGTGGCAGCCGTCTGCATCGCGATCGCGCCGGCCATGGCGGAGGCGGC AACGCCGCCAAAGGCGGTGACGCCGCTGGACTGGCCGCGCAACTTCGATGCCGCTAGCGAGCATGTGGAGCTGTACCAGC CCGAGATCGAGAAATGGGAGGGCAACCGCATGTCCGGCCGTGCCGCGGTCGCGGTCGGTGCGAAGGACGGGACGCCGACT TACGGTGTGGTCCACTTCTCGGCGGTCGCCGATATCGACAAGCCCTCAGCGCTGGTGCAGCTGACGCAGATCACCATCGA AAGCGTCGAGGTGCCGACGCGTCCCGAAGCCGCCGATCAGGTGCGCAACGCGCTGCTGGCCCGGCTGCCGGCGGGCGGCC TGACGGTGCCGCTCGACGAACTGCAGGCCAGCTACGCCGTCTCGCGCCAGCTGGCCAGTGCGACGAAGGTGCCCGTGAAG AACGATGCGCCGCAGATCATCTTTGCCACCACGCCGACGCTGCTGGTCCACGTGGACGGTGATCCGGCGTGGCGCAACGT GCCCGGTACCTCCTACGAACGCGCGCTGAACAGCCGCGCAATGCTGCTGCGCGAGCCCGGCGGCGAGCTGTACCTGCAGG CGGCGGGCTACTGGTTCCGTTCGGAGTCCGCTGGCGGCGCGTGGGAAGTCATGTCGACGGTACCCAAGGGCCTGCAGGCC GCGGCGACCAAGGCGGCAGCCGCTTCCAGGCCCGATGCCATGCTGCCGTCCGACGGCAAGCGCCCGGCGCGTGCGCCGGC CATCCAACTCGCAACCCGGCCGACCGAGCTTGTGGTGACGAGCGGTGCGCCACAGATGACGCCGGTGGGTGGCGGCGGGC TGCTGACGATGTCGAATGCCGATCATGCCGTGTTCGTCGATCCGGCGTCCAACAACTACTACGTGCTGGTGTCCGGACGC TGGTTCCGCGCGCCGATGCTGACCGGCCCGTGGCAATACGTGCCTGGCGGCGAGCTGCCAGCCGATTTCGCAAAGATTTC GCCGAACGACGCCAAGGCCAACGTGCTGGTGTCCGTGCCCGGCACGCCGCAGGCGAAGGAAGCCGTGATCGCCGCCACGA TCCCGCAGACCGCGAACGTCTCGCGCGCGAAGGCGGCGCTGACGGTGGCCTATGATGGCGCGCCGCGCTTTGTGTCGATC ACCGGTACCTCGCTGAGCTACGCGGTCAATACCGGTACGCCGGTGATCGAGGTGGACAGCAGTCACTACTACGCCGTGGC CAACGGCGTCTGGTTCACGGCTCCCGTCCCGACGGGCGCCTGGCGCGTGGCGACCGAAGTGCCGTCGGCGATCTACACGA TCCCGCCGAGCTCGCCGGTCTACTACGTGACCTATGTGCGCATCTATTCGGTCACGCCCGATACGGTCGTGGTCGGCTAC ACGCCGGGCTACATGGGCGTGGTTGTCAGCGCCGACGGCACCGTGGTGTACGGCACGGGCTACGTCTATCCGGCGTACCT GGGCGCGGTCTACTACGGCTACCCGGTCACGTACGGCTATGGCGCCGGCTTCGGCATCGGCCTGGCCGAGGGCTTTGCGT TCGGCTTTGCCGCGGGCGCGTTCTGGGGCGCGGCATCGCCGTACTGGGGACCGTACTGGTGGGGCGGCCCGTACAACTGG AATTACGTGAACGTGAACCAGGCCAACTTCTATGGCCGCTGGGGACAGGGCACGGTCACGCATGCGCAGGGCTGGAATGC CTGGACGGGTACGGAATGGCGCGGCACCGCGGCGTCCGGGTTCAACCCGGCCACGGGGGCGCATTTCCAGGGCAGCCGCG GCGCCGCCTTCAATCCCTATTCGGGCAATTACGCAGCGGGACGGCAGGGCTCGTTCGCCAACCCGTCGACAGGGCGCGAA GGTGCCGGACGCGGCGGTGTCGTCGGCAACGAGTACACCGGCAACTACGCGGCTGGCCGTCAGGTCGCTGGCTATAACGC GCAGACGGGCCGCGTGGGCGCTGCGGAGGCTGGTATTGCCGGAAATACCCAGACCGGCGAACACACGGCGGGCAGCCGTG GCTTTGTCGCCAATCCCGACAAGGGCAATGCGGTGGCGTGGAACAACGGCAATGTGTACGCCGGCCATGACGGTTCCGTG TACCAGCACACCGACAGCGGCTGGCAAAAGCACACGCCCGGCGGCTGGGAACCCGTGCAGCCCAATAACGAAGTCACCGG CCGGCTGGAACAGCAGCGCCAGGCGCGCGACATCGGCCAGCAACGATTCCAGGGCGCGGCGCAGCAATGGCAGGGCGGCG GCCGCTTCGGCGGTGGGGGCGGTGGCTTCCGCGGAGGCGGCCGATTCCACGGCGGCTTCCGGCGATGA
Upstream 100 bases:
>100_bases GGGTGCTCGTTGTGCAGTATCGTGCCCAACGTTCGTCCGGCCTGCCCTTGGGGCATCGCAGCGGGGCCATGCAGCGGACT GTCCCTACCTGGAGATTGCC
Downstream 100 bases:
>100_bases GTCGTCTTTGCCAGGCGCACAGACAACGCTGAATCCGCCCGCCGGCATGCGCATCGGCATGCACGTCGAAATGAGTAAAC ACGGCCACAAAAAGTTTGAA
Product: carbohydrate-binding family V/XII protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 795; Mature: 794
Protein sequence:
>795_residues MSFPLKHTSALVAAVCIAIAPAMAEAATPPKAVTPLDWPRNFDAASEHVELYQPEIEKWEGNRMSGRAAVAVGAKDGTPT YGVVHFSAVADIDKPSALVQLTQITIESVEVPTRPEAADQVRNALLARLPAGGLTVPLDELQASYAVSRQLASATKVPVK NDAPQIIFATTPTLLVHVDGDPAWRNVPGTSYERALNSRAMLLREPGGELYLQAAGYWFRSESAGGAWEVMSTVPKGLQA AATKAAAASRPDAMLPSDGKRPARAPAIQLATRPTELVVTSGAPQMTPVGGGGLLTMSNADHAVFVDPASNNYYVLVSGR WFRAPMLTGPWQYVPGGELPADFAKISPNDAKANVLVSVPGTPQAKEAVIAATIPQTANVSRAKAALTVAYDGAPRFVSI TGTSLSYAVNTGTPVIEVDSSHYYAVANGVWFTAPVPTGAWRVATEVPSAIYTIPPSSPVYYVTYVRIYSVTPDTVVVGY TPGYMGVVVSADGTVVYGTGYVYPAYLGAVYYGYPVTYGYGAGFGIGLAEGFAFGFAAGAFWGAASPYWGPYWWGGPYNW NYVNVNQANFYGRWGQGTVTHAQGWNAWTGTEWRGTAASGFNPATGAHFQGSRGAAFNPYSGNYAAGRQGSFANPSTGRE GAGRGGVVGNEYTGNYAAGRQVAGYNAQTGRVGAAEAGIAGNTQTGEHTAGSRGFVANPDKGNAVAWNNGNVYAGHDGSV YQHTDSGWQKHTPGGWEPVQPNNEVTGRLEQQRQARDIGQQRFQGAAQQWQGGGRFGGGGGGFRGGGRFHGGFRR
Sequences:
>Translated_795_residues MSFPLKHTSALVAAVCIAIAPAMAEAATPPKAVTPLDWPRNFDAASEHVELYQPEIEKWEGNRMSGRAAVAVGAKDGTPT YGVVHFSAVADIDKPSALVQLTQITIESVEVPTRPEAADQVRNALLARLPAGGLTVPLDELQASYAVSRQLASATKVPVK NDAPQIIFATTPTLLVHVDGDPAWRNVPGTSYERALNSRAMLLREPGGELYLQAAGYWFRSESAGGAWEVMSTVPKGLQA AATKAAAASRPDAMLPSDGKRPARAPAIQLATRPTELVVTSGAPQMTPVGGGGLLTMSNADHAVFVDPASNNYYVLVSGR WFRAPMLTGPWQYVPGGELPADFAKISPNDAKANVLVSVPGTPQAKEAVIAATIPQTANVSRAKAALTVAYDGAPRFVSI TGTSLSYAVNTGTPVIEVDSSHYYAVANGVWFTAPVPTGAWRVATEVPSAIYTIPPSSPVYYVTYVRIYSVTPDTVVVGY TPGYMGVVVSADGTVVYGTGYVYPAYLGAVYYGYPVTYGYGAGFGIGLAEGFAFGFAAGAFWGAASPYWGPYWWGGPYNW NYVNVNQANFYGRWGQGTVTHAQGWNAWTGTEWRGTAASGFNPATGAHFQGSRGAAFNPYSGNYAAGRQGSFANPSTGRE GAGRGGVVGNEYTGNYAAGRQVAGYNAQTGRVGAAEAGIAGNTQTGEHTAGSRGFVANPDKGNAVAWNNGNVYAGHDGSV YQHTDSGWQKHTPGGWEPVQPNNEVTGRLEQQRQARDIGQQRFQGAAQQWQGGGRFGGGGGGFRGGGRFHGGFRR >Mature_794_residues SFPLKHTSALVAAVCIAIAPAMAEAATPPKAVTPLDWPRNFDAASEHVELYQPEIEKWEGNRMSGRAAVAVGAKDGTPTY GVVHFSAVADIDKPSALVQLTQITIESVEVPTRPEAADQVRNALLARLPAGGLTVPLDELQASYAVSRQLASATKVPVKN DAPQIIFATTPTLLVHVDGDPAWRNVPGTSYERALNSRAMLLREPGGELYLQAAGYWFRSESAGGAWEVMSTVPKGLQAA ATKAAAASRPDAMLPSDGKRPARAPAIQLATRPTELVVTSGAPQMTPVGGGGLLTMSNADHAVFVDPASNNYYVLVSGRW FRAPMLTGPWQYVPGGELPADFAKISPNDAKANVLVSVPGTPQAKEAVIAATIPQTANVSRAKAALTVAYDGAPRFVSIT GTSLSYAVNTGTPVIEVDSSHYYAVANGVWFTAPVPTGAWRVATEVPSAIYTIPPSSPVYYVTYVRIYSVTPDTVVVGYT PGYMGVVVSADGTVVYGTGYVYPAYLGAVYYGYPVTYGYGAGFGIGLAEGFAFGFAAGAFWGAASPYWGPYWWGGPYNWN YVNVNQANFYGRWGQGTVTHAQGWNAWTGTEWRGTAASGFNPATGAHFQGSRGAAFNPYSGNYAAGRQGSFANPSTGREG AGRGGVVGNEYTGNYAAGRQVAGYNAQTGRVGAAEAGIAGNTQTGEHTAGSRGFVANPDKGNAVAWNNGNVYAGHDGSVY QHTDSGWQKHTPGGWEPVQPNNEVTGRLEQQRQARDIGQQRFQGAAQQWQGGGRFGGGGGGFRGGGRFHGGFRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83592; Mature: 83460
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPLKHTSALVAAVCIAIAPAMAEAATPPKAVTPLDWPRNFDAASEHVELYQPEIEKWE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHEEECCCHHHCC GNRMSGRAAVAVGAKDGTPTYGVVHFSAVADIDKPSALVQLTQITIESVEVPTRPEAADQ CCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCHHHEEEEEEEEEEECCCCCCCHHHH VRNALLARLPAGGLTVPLDELQASYAVSRQLASATKVPVKNDAPQIIFATTPTLLVHVDG HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECC DPAWRNVPGTSYERALNSRAMLLREPGGELYLQAAGYWFRSESAGGAWEVMSTVPKGLQA CCCCCCCCCCHHHHHHCCCEEEEECCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHH AATKAAAASRPDAMLPSDGKRPARAPAIQLATRPTELVVTSGAPQMTPVGGGGLLTMSNA HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCC DHAVFVDPASNNYYVLVSGRWFRAPMLTGPWQYVPGGELPADFAKISPNDAKANVLVSVP CCEEEEECCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECC GTPQAKEAVIAATIPQTANVSRAKAALTVAYDGAPRFVSITGTSLSYAVNTGTPVIEVDS CCCCHHCEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEECCEEEEEEECCCEEEEECC SHYYAVANGVWFTAPVPTGAWRVATEVPSAIYTIPPSSPVYYVTYVRIYSVTPDTVVVGY CEEEEEECCEEEECCCCCCCEEEHHHCCCEEEECCCCCCEEEEEEEEEEEECCCEEEEEE TPGYMGVVVSADGTVVYGTGYVYPAYLGAVYYGYPVTYGYGAGFGIGLAEGFAFGFAAGA CCCCEEEEEECCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHH FWGAASPYWGPYWWGGPYNWNYVNVNQANFYGRWGQGTVTHAQGWNAWTGTEWRGTAASG HHCCCCCCCCCEECCCCCCCCEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCC FNPATGAHFQGSRGAAFNPYSGNYAAGRQGSFANPSTGREGAGRGGVVGNEYTGNYAAGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QVAGYNAQTGRVGAAEAGIAGNTQTGEHTAGSRGFVANPDKGNAVAWNNGNVYAGHDGSV EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCEEECCCCCE YQHTDSGWQKHTPGGWEPVQPNNEVTGRLEQQRQARDIGQQRFQGAAQQWQGGGRFGGGG EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GGFRGGGRFHGGFRR CCCCCCCCCCCCCCC >Mature Secondary Structure SFPLKHTSALVAAVCIAIAPAMAEAATPPKAVTPLDWPRNFDAASEHVELYQPEIEKWE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHEEECCCHHHCC GNRMSGRAAVAVGAKDGTPTYGVVHFSAVADIDKPSALVQLTQITIESVEVPTRPEAADQ CCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCHHHEEEEEEEEEEECCCCCCCHHHH VRNALLARLPAGGLTVPLDELQASYAVSRQLASATKVPVKNDAPQIIFATTPTLLVHVDG HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECC DPAWRNVPGTSYERALNSRAMLLREPGGELYLQAAGYWFRSESAGGAWEVMSTVPKGLQA CCCCCCCCCCHHHHHHCCCEEEEECCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHH AATKAAAASRPDAMLPSDGKRPARAPAIQLATRPTELVVTSGAPQMTPVGGGGLLTMSNA HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCC DHAVFVDPASNNYYVLVSGRWFRAPMLTGPWQYVPGGELPADFAKISPNDAKANVLVSVP CCEEEEECCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECC GTPQAKEAVIAATIPQTANVSRAKAALTVAYDGAPRFVSITGTSLSYAVNTGTPVIEVDS CCCCHHCEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEECCEEEEEEECCCEEEEECC SHYYAVANGVWFTAPVPTGAWRVATEVPSAIYTIPPSSPVYYVTYVRIYSVTPDTVVVGY CEEEEEECCEEEECCCCCCCEEEHHHCCCEEEECCCCCCEEEEEEEEEEEECCCEEEEEE TPGYMGVVVSADGTVVYGTGYVYPAYLGAVYYGYPVTYGYGAGFGIGLAEGFAFGFAAGA CCCCEEEEEECCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHH FWGAASPYWGPYWWGGPYNWNYVNVNQANFYGRWGQGTVTHAQGWNAWTGTEWRGTAASG HHCCCCCCCCCEECCCCCCCCEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCC FNPATGAHFQGSRGAAFNPYSGNYAAGRQGSFANPSTGREGAGRGGVVGNEYTGNYAAGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QVAGYNAQTGRVGAAEAGIAGNTQTGEHTAGSRGFVANPDKGNAVAWNNGNVYAGHDGSV EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCEEECCCCCE YQHTDSGWQKHTPGGWEPVQPNNEVTGRLEQQRQARDIGQQRFQGAAQQWQGGGRFGGGG EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GGFRGGGRFHGGFRR CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA