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The map label for this gene is mtrC [H]

Identifier: 73542747

GI number: 73542747

Start: 3369918

End: 3371156

Strand: Reverse

Name: mtrC [H]

Synonym: Reut_A3063

Alternate gene names: 73542747

Gene position: 3371156-3369918 (Counterclockwise)

Preceding gene: 73542748

Following gene: 73542746

Centisome position: 88.56

GC content: 67.96

Gene sequence:

>1239_bases
ATGCTCAACTGGCGCAATGCAGCGGGGCTGATTGCGGTCTTGCTGGCAGCGGGCTGCGGCAAGGAGAAGCCGGTAGCCGT
CGCGCCCCCGCCAGCCGAGGTCGGGGTCATGACGGTGGCGCTGCGCGACGTGCCGCTGATCTACGATTTCGTCGGGCAGA
CGGAAAGCTCGCAGCAGGTTGAAATCCGGGCGCGCGTCAATGGCTTCCTGGACAAGCGGGTCTATACCGAAGGCGCGGTG
GTCAAGGCCGGCCAGACCCTGTTCCTGATGGACCGCAAGCCGTTCGAGGCCACGCTGCAGGCGGCCGAGGCGCAGTTGGG
CCAGGAGCAGGCCCGGCTGTCCACGGCGCGCGCCGACCTGAAACGTGTACGCCCGCTGGCTGAGCGCAATGCCCTGAGCC
AGCGCGACCTGGACGATGCCATTGGCAAGGAGCAAGCGGCCGCCGCAGCGGTCGAGGGGGCGCGCGCCAATGTCATCACC
GCCAAGCTCAATCTCGGCTACACGACGATTACTTCGCCGGTGGCGGGCCTGTCGAGCTTTGCCAAGCGCCAGCCGGGCTC
CTACATTGACCCGACCAACAGCCTGCTCACGTACGTCGCCAAGCTGGATCCGATGTGGGTGAACTTCAGCCTGTCGGAGA
ACGAGGTGTTGCGAATTCGCACCGAGCGCGAATCCGGCGCGATTCGTTACCCCGAACAGGACAAGTTCGAGGTAGCCATC
GTGCTGGCCGACGGCACGGTATTCCCGAACCGCGGTCGGATCGCTTTCGCCGATGCATCGTTCAACGCCGAAACCGGCAC
TTATCTGGTCCGTGCCGAGGTGGCCAACCCGGAAGGCGTGCTGCGTCCCGGCCAGTTCGTGCGGGTCAAGGTGCACGGGG
CCACGCGGACGAACGCGATTGCGGTGCCGCAGGACGCGATCATCCAGAGCCAGCGCGGCCAGACGGTGTGGGTGATCGGC
CCGGACAACAAGGCCCAGCAGCGCGTGGTCGACGTTGGCGAGTGGACCGGCAACAACTGGGTGGTACGTTCCGGACTGAA
GCCCGGTGAGCGCGTGGCGGTGAGCGGCACCTTGCGCCTGGCGCCCGGTGCGCCGGTCAAGGCGGTCGAGGTCAAGCCGG
GCACCGTGCCTGCGGCGGCCAGCGGTGCCGCGGCGGAAATGCCGGCACCTCAGGCCCCGACGACGCCGGCATCTGGCGCA
GCGGCGGCGGCATCGGCGCCGGCGGGAGGCAAGTCATGA

Upstream 100 bases:

>100_bases
CGTAACCTGCCTGAACAGGCACCGGAGCGGCGGGATTTCACCCGTTTGTCCGACAGGGGGAGCGGCCATGGCTGCTGGCA
CAGGAGGTCACGTGAGGACA

Downstream 100 bases:

>100_bases
AACTTGCCCATTTCTTTATCGACCGGCCCATCTTTGCGTCGGTCCTTTCCATCATCATCACGGTCGGCGGCCTGGTGGCG
CTGACCAAGCTGCCGATCGC

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MLNWRNAAGLIAVLLAAGCGKEKPVAVAPPPAEVGVMTVALRDVPLIYDFVGQTESSQQVEIRARVNGFLDKRVYTEGAV
VKAGQTLFLMDRKPFEATLQAAEAQLGQEQARLSTARADLKRVRPLAERNALSQRDLDDAIGKEQAAAAAVEGARANVIT
AKLNLGYTTITSPVAGLSSFAKRQPGSYIDPTNSLLTYVAKLDPMWVNFSLSENEVLRIRTERESGAIRYPEQDKFEVAI
VLADGTVFPNRGRIAFADASFNAETGTYLVRAEVANPEGVLRPGQFVRVKVHGATRTNAIAVPQDAIIQSQRGQTVWVIG
PDNKAQQRVVDVGEWTGNNWVVRSGLKPGERVAVSGTLRLAPGAPVKAVEVKPGTVPAAASGAAAEMPAPQAPTTPASGA
AAAASAPAGGKS

Sequences:

>Translated_412_residues
MLNWRNAAGLIAVLLAAGCGKEKPVAVAPPPAEVGVMTVALRDVPLIYDFVGQTESSQQVEIRARVNGFLDKRVYTEGAV
VKAGQTLFLMDRKPFEATLQAAEAQLGQEQARLSTARADLKRVRPLAERNALSQRDLDDAIGKEQAAAAAVEGARANVIT
AKLNLGYTTITSPVAGLSSFAKRQPGSYIDPTNSLLTYVAKLDPMWVNFSLSENEVLRIRTERESGAIRYPEQDKFEVAI
VLADGTVFPNRGRIAFADASFNAETGTYLVRAEVANPEGVLRPGQFVRVKVHGATRTNAIAVPQDAIIQSQRGQTVWVIG
PDNKAQQRVVDVGEWTGNNWVVRSGLKPGERVAVSGTLRLAPGAPVKAVEVKPGTVPAAASGAAAEMPAPQAPTTPASGA
AAAASAPAGGKS
>Mature_412_residues
MLNWRNAAGLIAVLLAAGCGKEKPVAVAPPPAEVGVMTVALRDVPLIYDFVGQTESSQQVEIRARVNGFLDKRVYTEGAV
VKAGQTLFLMDRKPFEATLQAAEAQLGQEQARLSTARADLKRVRPLAERNALSQRDLDDAIGKEQAAAAAVEGARANVIT
AKLNLGYTTITSPVAGLSSFAKRQPGSYIDPTNSLLTYVAKLDPMWVNFSLSENEVLRIRTERESGAIRYPEQDKFEVAI
VLADGTVFPNRGRIAFADASFNAETGTYLVRAEVANPEGVLRPGQFVRVKVHGATRTNAIAVPQDAIIQSQRGQTVWVIG
PDNKAQQRVVDVGEWTGNNWVVRSGLKPGERVAVSGTLRLAPGAPVKAVEVKPGTVPAAASGAAAEMPAPQAPTTPASGA
AAAASAPAGGKS

Specific function: Cell membrane lipoprotein, involved in cell membrane permeability to hydrophobic compounds such as antibiotics, dyes and detergents [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1786668, Length=375, Percent_Identity=33.6, Blast_Score=195, Evalue=4e-51,
Organism=Escherichia coli, GI1789929, Length=359, Percent_Identity=33.1476323119777, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1789665, Length=368, Percent_Identity=31.25, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI87082036, Length=353, Percent_Identity=30.028328611898, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI87081796, Length=330, Percent_Identity=26.969696969697, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87081951, Length=143, Percent_Identity=30.7692307692308, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 43491; Mature: 43491

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNWRNAAGLIAVLLAAGCGKEKPVAVAPPPAEVGVMTVALRDVPLIYDFVGQTESSQQV
CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHCEEEEEECCCCEEEHHHCCCCCCCEE
EIRARVNGFLDKRVYTEGAVVKAGQTLFLMDRKPFEATLQAAEAQLGQEQARLSTARADL
EEEEEHHHHHHHHEECCCCEEECCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHH
KRVRPLAERNALSQRDLDDAIGKEQAAAAAVEGARANVITAKLNLGYTTITSPVAGLSSF
HHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHCCCCCEEEEEEEECCEEEHHHHHHHHHHH
AKRQPGSYIDPTNSLLTYVAKLDPMWVNFSLSENEVLRIRTERESGAIRYPEQDKFEVAI
HHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCEECCCCCCEEEEE
VLADGTVFPNRGRIAFADASFNAETGTYLVRAEVANPEGVLRPGQFVRVKVHGATRTNAI
EEECCEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEE
AVPQDAIIQSQRGQTVWVIGPDNKAQQRVVDVGEWTGNNWVVRSGLKPGERVAVSGTLRL
ECCHHHHHHCCCCCEEEEECCCCHHHHHEEECCEECCCCEEEECCCCCCCEEEEEEEEEE
APGAPVKAVEVKPGTVPAAASGAAAEMPAPQAPTTPASGAAAAASAPAGGKS
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNWRNAAGLIAVLLAAGCGKEKPVAVAPPPAEVGVMTVALRDVPLIYDFVGQTESSQQV
CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHCEEEEEECCCCEEEHHHCCCCCCCEE
EIRARVNGFLDKRVYTEGAVVKAGQTLFLMDRKPFEATLQAAEAQLGQEQARLSTARADL
EEEEEHHHHHHHHEECCCCEEECCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHH
KRVRPLAERNALSQRDLDDAIGKEQAAAAAVEGARANVITAKLNLGYTTITSPVAGLSSF
HHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHCCCCCEEEEEEEECCEEEHHHHHHHHHHH
AKRQPGSYIDPTNSLLTYVAKLDPMWVNFSLSENEVLRIRTERESGAIRYPEQDKFEVAI
HHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCEECCCCCCEEEEE
VLADGTVFPNRGRIAFADASFNAETGTYLVRAEVANPEGVLRPGQFVRVKVHGATRTNAI
EEECCEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEE
AVPQDAIIQSQRGQTVWVIGPDNKAQQRVVDVGEWTGNNWVVRSGLKPGERVAVSGTLRL
ECCHHHHHHCCCCCEEEEECCCCHHHHHEEECCEECCCCEEEECCCCCCCEEEEEEEEEE
APGAPVKAVEVKPGTVPAAASGAAAEMPAPQAPTTPASGAAAAASAPAGGKS
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8196548 [H]