| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73542683
Identifier: 73542683
GI number: 73542683
Start: 3293446
End: 3294585
Strand: Reverse
Name: 73542683
Synonym: Reut_A2999
Alternate gene names: NA
Gene position: 3294585-3293446 (Counterclockwise)
Preceding gene: 73542684
Following gene: 73542679
Centisome position: 86.55
GC content: 66.23
Gene sequence:
>1140_bases ATGGACTGGAAAAAGGTTCGCCGGCGGACGGCGGGCATCCTTGCAGCGGCGGGGCTGACGCTGGCGGTGGCCGGCTGTGA CACGCTCGGCTATTACTACCAGTCCATCGGCGGCCATCTTGGCGTGATGGCGCAGGCGCAGGCGCTCGACGATGCCATTG CCCGCGCACAGGCGTCCAACGACACGCGCCTTGCTCAGCGCCTGGGGCTCGCGCGCCAGATCCGGGACTATGCCTCGCGC GAGTTGAAGCTGCCCGACAACGGCAGCTACCGCCGCTATGCCAACCTCCATCGGCCCTATGTCGTGTGGAGCGTGTTCGC GACGCCGGAATTGTCGATGGCGCTGCACAAGTGGTGCTTCCCGATCGTCGGCTGCATCAGCTACCGCGGCTATTACGCGC AGGGCGATGCCGAACAATATGCCGCCGGCCTGCGCCGTGAGGGCCTGGAAACCTATGTGGCCGGTATCCCGGCCTATTCC ACGCTTGGCTATTTTGACGATCCGCTGCTGAACACCTTCCTGTACCTGCCAGAAGGGGAGCTGGCGCGGATGATCTTCCA CGAACTGGCGCACCAGGTCGTGTACGTGCGCAACGACACGCCCTTCAACGAGTCCTTCGCGACCGCAGTCGAAATGGCCG GCGTCGAGCGCTGGCTTCGCGACGAGGCGTCCGAGGATGCTCGCGCGAGTTACCGGCAGTACGACAACCGGCGCAAGCAG TTCCGGGCCCTGCTGCTCGATACGCGCGACCGGCTCGACGCCATGTACCGTTCGGGCGCCGACGATGACGCCAAGCGCCG CGGCAAGAACGAGATCTTTGACAGCCTGCGGCACCAGTACGCCGCGTTGCGTACGGAGTGGGGCGGCTACAGCGGCTACG ACCGCTGGTTCGACCAGCCGTTGACCAATGCGCACCTGGCCGCCGTGGCGACGTACCAGCAATGGGTGCCCGCGTTCTCC GCACTGCTCGACAGCGTGGGCGGCGACTGGACGCGGTTCTATGCCGAAGTGCAGCGCATCGGCGACCTGCCGGAAGCCGA GCGCCACGCCGCGCTGAGCAAGCTGGCCCCGCCGGCGGTGAACACCGGTACGCTAAACGCCGAAGATCACTCATCGGGCG TGGGCAAGTTGGGCCACTGA
Upstream 100 bases:
>100_bases ACGGATCTGGGCCGCGCGCCCGTGTTCTACGATTGCCTGGTCGAGGTGGAGGCATGGCAGGAAGTCGGCGAGGCAGCGGC GGCTGCCTCATGATGCAGTG
Downstream 100 bases:
>100_bases CCGGACACGGGCCAAATCAGACGCCGGTAGGCCGCTTCATGTGGCAGGCGGACGGCAAGTCGAGTGCCTGTGCCGGCGTC ACGCTGTTCAGGCGCAAGCC
Product: putative zinc protease protein
Products: NA
Alternate protein names: Aminopeptidase; Aminopeptidase-Like Protein; Lipoprotein
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MDWKKVRRRTAGILAAAGLTLAVAGCDTLGYYYQSIGGHLGVMAQAQALDDAIARAQASNDTRLAQRLGLARQIRDYASR ELKLPDNGSYRRYANLHRPYVVWSVFATPELSMALHKWCFPIVGCISYRGYYAQGDAEQYAAGLRREGLETYVAGIPAYS TLGYFDDPLLNTFLYLPEGELARMIFHELAHQVVYVRNDTPFNESFATAVEMAGVERWLRDEASEDARASYRQYDNRRKQ FRALLLDTRDRLDAMYRSGADDDAKRRGKNEIFDSLRHQYAALRTEWGGYSGYDRWFDQPLTNAHLAAVATYQQWVPAFS ALLDSVGGDWTRFYAEVQRIGDLPEAERHAALSKLAPPAVNTGTLNAEDHSSGVGKLGH
Sequences:
>Translated_379_residues MDWKKVRRRTAGILAAAGLTLAVAGCDTLGYYYQSIGGHLGVMAQAQALDDAIARAQASNDTRLAQRLGLARQIRDYASR ELKLPDNGSYRRYANLHRPYVVWSVFATPELSMALHKWCFPIVGCISYRGYYAQGDAEQYAAGLRREGLETYVAGIPAYS TLGYFDDPLLNTFLYLPEGELARMIFHELAHQVVYVRNDTPFNESFATAVEMAGVERWLRDEASEDARASYRQYDNRRKQ FRALLLDTRDRLDAMYRSGADDDAKRRGKNEIFDSLRHQYAALRTEWGGYSGYDRWFDQPLTNAHLAAVATYQQWVPAFS ALLDSVGGDWTRFYAEVQRIGDLPEAERHAALSKLAPPAVNTGTLNAEDHSSGVGKLGH >Mature_379_residues MDWKKVRRRTAGILAAAGLTLAVAGCDTLGYYYQSIGGHLGVMAQAQALDDAIARAQASNDTRLAQRLGLARQIRDYASR ELKLPDNGSYRRYANLHRPYVVWSVFATPELSMALHKWCFPIVGCISYRGYYAQGDAEQYAAGLRREGLETYVAGIPAYS TLGYFDDPLLNTFLYLPEGELARMIFHELAHQVVYVRNDTPFNESFATAVEMAGVERWLRDEASEDARASYRQYDNRRKQ FRALLLDTRDRLDAMYRSGADDDAKRRGKNEIFDSLRHQYAALRTEWGGYSGYDRWFDQPLTNAHLAAVATYQQWVPAFS ALLDSVGGDWTRFYAEVQRIGDLPEAERHAALSKLAPPAVNTGTLNAEDHSSGVGKLGH
Specific function: Unknown
COG id: COG4324
COG function: function code R; Predicted aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42616; Mature: 42616
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWKKVRRRTAGILAAAGLTLAVAGCDTLGYYYQSIGGHLGVMAQAQALDDAIARAQASN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC DTRLAQRLGLARQIRDYASRELKLPDNGSYRRYANLHRPYVVWSVFATPELSMALHKWCF HHHHHHHHHHHHHHHHHHHCEECCCCCCCCHHHHHCCCCEEEEEEECCCHHHHHHHHHHH PIVGCISYRGYYAQGDAEQYAAGLRREGLETYVAGIPAYSTLGYFDDPLLNTFLYLPEGE HHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHEEECCCHH LARMIFHELAHQVVYVRNDTPFNESFATAVEMAGVERWLRDEASEDARASYRQYDNRRKQ HHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FRALLLDTRDRLDAMYRSGADDDAKRRGKNEIFDSLRHQYAALRTEWGGYSGYDRWFDQP HHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC LTNAHLAAVATYQQWVPAFSALLDSVGGDWTRFYAEVQRIGDLPEAERHAALSKLAPPAV CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC NTGTLNAEDHSSGVGKLGH CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDWKKVRRRTAGILAAAGLTLAVAGCDTLGYYYQSIGGHLGVMAQAQALDDAIARAQASN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC DTRLAQRLGLARQIRDYASRELKLPDNGSYRRYANLHRPYVVWSVFATPELSMALHKWCF HHHHHHHHHHHHHHHHHHHCEECCCCCCCCHHHHHCCCCEEEEEEECCCHHHHHHHHHHH PIVGCISYRGYYAQGDAEQYAAGLRREGLETYVAGIPAYSTLGYFDDPLLNTFLYLPEGE HHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHEEECCCHH LARMIFHELAHQVVYVRNDTPFNESFATAVEMAGVERWLRDEASEDARASYRQYDNRRKQ HHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FRALLLDTRDRLDAMYRSGADDDAKRRGKNEIFDSLRHQYAALRTEWGGYSGYDRWFDQP HHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC LTNAHLAAVATYQQWVPAFSALLDSVGGDWTRFYAEVQRIGDLPEAERHAALSKLAPPAV CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC NTGTLNAEDHSSGVGKLGH CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA