| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73542635
Identifier: 73542635
GI number: 73542635
Start: 3236451
End: 3237176
Strand: Reverse
Name: 73542635
Synonym: Reut_A2951
Alternate gene names: NA
Gene position: 3237176-3236451 (Counterclockwise)
Preceding gene: 73542636
Following gene: 73542634
Centisome position: 85.04
GC content: 69.28
Gene sequence:
>726_bases ATGCGCGCGGCCCGTCTGGTTCGCACGGCCGGCAGCCTGCTGCTGGCCTTTGCCGCCACTGCCGCGCAGGCTGGCGCGCA AAAGGAAGAAGATCTGGCCGATTCGGTGCGCGGCGCGCTGGCTGCGGCCATTGCCGACTCGCGCCCGGTGCGGCCGGTCT TTGCCACCGGCGGCGAACGGCTGGCCTACCTCAAGTGGCTCGGCGAAATGTCGCATCGGCTCGAAGGCCGCATCCCCGAG CCGCAGATGCGCGTGGAGCTGATCGAAGCCGCGTACTACGAAGCCAAGCGCGCCGGGCTCGAACCCTCGCTGGTGCTGGG CCTGGTGCAGGTCGAAAGCAACTTCCGCAAGTACGCGATCAGCTCGGTCGGCGCGCGCGGTCTGATGCAAGTGATGCCCT TCTGGGTCCGCACGATCGGCGACAACGACCCGCGCAAGCTGTTCCACCTGCAGAGCAACCTGCGCTACGGCTGCACCATC CTGCGCCACTACCTGGACCGCGAGCAGGGCGACCTGTTCCTGGCGCTCGGCCGCTACAACGGCAGCCGCGGCCGTCCTGA ATACCCGAACGCGGTGCTGGCCGCGTGGAAGCGCTGGCAGTATTCGGAAGCCACGGTTACCGTCGCGGGCGACCCGGAGA ACGCGCCGACCCGTCCGCGCAAGCTGCTGCCCGAGGCGCCCGCGCGTAACCCGTTCTCGCCGCAGCGCCTGGCCAATCCG TCATGA
Upstream 100 bases:
>100_bases GGCAAGGTCGAATACCAGGGCCGCCGCGACGCGCAGGCGACGCAAGTGGCCGTGGCCGACGTGGTCGGCCACGTACGCGG CCAGATCGGCAAGTAAGCCC
Downstream 100 bases:
>100_bases CTGTCGACACGCGTCCGGCCGTGGGCAATCCGGGCTATGCCACCTCGTCGCCCGAGCTTGAGCGCTGGCTGGCGCGGCAT ATTTCCGAGGGCTTTGGCGC
Product: lytic transglycosylase, catalytic
Products: NA
Alternate protein names: Transglycosylase; Transglycosylase SLT Domain Protein; Lytic Murein Transglycosylase; Twin-Arginine Translocation Pathway Signal; Soluble Lytic Murein Transglycosylase-Like; Soluble Lytic Murein Transglycosylase- Related Protein; Lytic Transglycosylase; SLT Domain-Containing Protein; Signal Peptide Protein; Soluble Lytic Murein Transglycosylase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MRAARLVRTAGSLLLAFAATAAQAGAQKEEDLADSVRGALAAAIADSRPVRPVFATGGERLAYLKWLGEMSHRLEGRIPE PQMRVELIEAAYYEAKRAGLEPSLVLGLVQVESNFRKYAISSVGARGLMQVMPFWVRTIGDNDPRKLFHLQSNLRYGCTI LRHYLDREQGDLFLALGRYNGSRGRPEYPNAVLAAWKRWQYSEATVTVAGDPENAPTRPRKLLPEAPARNPFSPQRLANP S
Sequences:
>Translated_241_residues MRAARLVRTAGSLLLAFAATAAQAGAQKEEDLADSVRGALAAAIADSRPVRPVFATGGERLAYLKWLGEMSHRLEGRIPE PQMRVELIEAAYYEAKRAGLEPSLVLGLVQVESNFRKYAISSVGARGLMQVMPFWVRTIGDNDPRKLFHLQSNLRYGCTI LRHYLDREQGDLFLALGRYNGSRGRPEYPNAVLAAWKRWQYSEATVTVAGDPENAPTRPRKLLPEAPARNPFSPQRLANP S >Mature_241_residues MRAARLVRTAGSLLLAFAATAAQAGAQKEEDLADSVRGALAAAIADSRPVRPVFATGGERLAYLKWLGEMSHRLEGRIPE PQMRVELIEAAYYEAKRAGLEPSLVLGLVQVESNFRKYAISSVGARGLMQVMPFWVRTIGDNDPRKLFHLQSNLRYGCTI LRHYLDREQGDLFLALGRYNGSRGRPEYPNAVLAAWKRWQYSEATVTVAGDPENAPTRPRKLLPEAPARNPFSPQRLANP S
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26714; Mature: 26714
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAARLVRTAGSLLLAFAATAAQAGAQKEEDLADSVRGALAAAIADSRPVRPVFATGGER CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCH LAYLKWLGEMSHRLEGRIPEPQMRVELIEAAYYEAKRAGLEPSLVLGLVQVESNFRKYAI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SSVGARGLMQVMPFWVRTIGDNDPRKLFHLQSNLRYGCTILRHYLDREQGDLFLALGRYN HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCC GSRGRPEYPNAVLAAWKRWQYSEATVTVAGDPENAPTRPRKLLPEAPARNPFSPQRLANP CCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHCCCC S C >Mature Secondary Structure MRAARLVRTAGSLLLAFAATAAQAGAQKEEDLADSVRGALAAAIADSRPVRPVFATGGER CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCH LAYLKWLGEMSHRLEGRIPEPQMRVELIEAAYYEAKRAGLEPSLVLGLVQVESNFRKYAI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SSVGARGLMQVMPFWVRTIGDNDPRKLFHLQSNLRYGCTILRHYLDREQGDLFLALGRYN HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCC GSRGRPEYPNAVLAAWKRWQYSEATVTVAGDPENAPTRPRKLLPEAPARNPFSPQRLANP CCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA