Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73542394
Identifier: 73542394
GI number: 73542394
Start: 2973221
End: 2974846
Strand: Direct
Name: 73542394
Synonym: Reut_A2709
Alternate gene names: NA
Gene position: 2973221-2974846 (Clockwise)
Preceding gene: 73542393
Following gene: 73542395
Centisome position: 78.11
GC content: 61.01
Gene sequence:
>1626_bases ATGACCAAACCGGATATGTCCAAGCTGGCGAGCCTCTCGCCGTTCGAACTGAAGGATGAACTGATCAAGCTTGCCAGCAG CGATGCGGACCGCCTGATGCTGAACGCGGGCCGCGGCAACCCCAATTTCCTCGCCACGATTCCGCGCCACGGCTTCTGGC AGCTCGGCCTGTTCGCCATGCGCGAATCGGAGCGTTCGTTCTCGTACATGCCCGAAGGCGTAGGCGGCTTCCCGCGCCGC GAAGGCATCGAGGAACGCTTCGACCTGTTCGCGCGCGAGTTCGCTCACGTGCCGGGCGTCTCGTTCCTGGCCGGAGCCGT CTCCTATGTGCGCGACCAGCTTGGGCTGAACGCCGGCGCTTTCCTCTATGAAATGTGCGAAGGCATCCTGGCCTGCAATT ACCCGGTGCCGGACCGCATGCTGAAGCTGTCCGAGGTTATCGTGGGCCAGTACATCCGCAAGGAGATGATCGGCAACCAT CCGTTCATCGGCGAGTTCGACCTGTTCGCGGTCGAAGGCGGCACCGCGGCGATGACGTACCTGTTCAACTCGATCCGCGA AAACCACCTGCTCAAGGCCGGCGATACCATTGCGCTGGGCATGCCGATCTTCACGCCGTACATCGAGATCCCGGAACTGA ACGACTACAAGCTCGTCGAGCTTTCGGTCGAGGCCGATCCCGGCGAACGTTGGCAGTACTCGAACAAGGAACTCGACAAG CTGCGCGACCCGAAGGTCAAGGCCTTCTTCCTCGTCAATCCGAGCAACCCGCCCTCGGTACGCATGAGCGATGAAAGCCT CGAGTACCTGGCGTCGATCATCGAGGAACGTCCCGACCTGATCATCCTGACCGACGATGTGTATGGCACCTTTGCTGACA ACTTCGTCTCGCTGTTTGCGATGTGCCCGAAGAACACCATCCTGGTGTACTCGTTCTCGAAGTACTTCGGCGCGACCGGC TGGCGGCTCGGCGTGATTGCCACGCACCGCGACAACGTGTTCGACGAAAAGATCGCCGCGCTGCCCGATGCCGCGCGCAA GGAGCTGCACGAACGCTATACGTCGATCACCACCGAGCCGGACAAGCTTAAATTCATCGACCGCCTGGTGGCCGACAGTC GCACGGTGGCGCTGAACCACACGGCCGGCCTGTCCACGCCGCAGCAGGTACAGATGGTGCTGTTCTCGTTGTTCTCTCTG ATGGACACGCCCGACAACTACAAGATCGCCATGAAGCGGCTGATCCGGAACCGCAAGGCTGCGCTGTATCGCGAAATTGG CATCGCGCCGGAGGCGGACGATCCGAATGCCGTGGATTACTACACGCTGCTCGACATCGAGGCGCTGGGCGGCAAAGCGC TCGGTCCTGACTTCGTGAAATGGGTGCTCGCCTCGGTGGAGCCCAATGAGCTGCTGTTCCGCCTGGCTGAAGATGCAGGC GTGGTGCTGCTGCCAGGCCGTGGCTTTGGTACGCGCCATCCGTCCGGCCGCGTATCGCTGGCCAACCTGAACGAATCGGA CTACGCGAAAATCGGCCGCTCGATCCGCAAGCTCTTCGAGGAGTATGTGGAAAAGTACAACGAAGCCACCGGCAATAAGG CCAACAAACACGTGGTGAAGAAGTAG
Upstream 100 bases:
>100_bases TAGCGGTCACGTCGTTTCACCGTTCTTCCTGCTGCGCGGGCCGCCCTTCCCTCCCGGCCCGCCAGCGCCAACCCGACAAG CGTCTTAACAGGAGCAAGTC
Downstream 100 bases:
>100_bases GCGCGACGCGCCCGGCACTGCGGTGCCGGGCGCGTCGCCGGCTGCATGCGGTTGGCTGCATGCAGCCGGCTCTGGTATGG TCGTGGGCGATTCCAGTGAC
Product: aspartate aminotransferase
Products: NA
Alternate protein names: Aminotransferase Class I And II; Aspartate/Tyrosine/Aromatic Aminotransferase; Aspartate 4-Decarboxylase; L-Aspartate Beta-Decarboxylase; Class I/II Aminotransferase; Aromatic Amino Acid Aminotransferase; Class I And II Aminotransferase; Transferase; Aminotransferase Classes I And II; Aromatic Aminotransferase; Aminotransferase Classes I And II Superfamily; Aspartate Decarboxylase
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MTKPDMSKLASLSPFELKDELIKLASSDADRLMLNAGRGNPNFLATIPRHGFWQLGLFAMRESERSFSYMPEGVGGFPRR EGIEERFDLFAREFAHVPGVSFLAGAVSYVRDQLGLNAGAFLYEMCEGILACNYPVPDRMLKLSEVIVGQYIRKEMIGNH PFIGEFDLFAVEGGTAAMTYLFNSIRENHLLKAGDTIALGMPIFTPYIEIPELNDYKLVELSVEADPGERWQYSNKELDK LRDPKVKAFFLVNPSNPPSVRMSDESLEYLASIIEERPDLIILTDDVYGTFADNFVSLFAMCPKNTILVYSFSKYFGATG WRLGVIATHRDNVFDEKIAALPDAARKELHERYTSITTEPDKLKFIDRLVADSRTVALNHTAGLSTPQQVQMVLFSLFSL MDTPDNYKIAMKRLIRNRKAALYREIGIAPEADDPNAVDYYTLLDIEALGGKALGPDFVKWVLASVEPNELLFRLAEDAG VVLLPGRGFGTRHPSGRVSLANLNESDYAKIGRSIRKLFEEYVEKYNEATGNKANKHVVKK
Sequences:
>Translated_541_residues MTKPDMSKLASLSPFELKDELIKLASSDADRLMLNAGRGNPNFLATIPRHGFWQLGLFAMRESERSFSYMPEGVGGFPRR EGIEERFDLFAREFAHVPGVSFLAGAVSYVRDQLGLNAGAFLYEMCEGILACNYPVPDRMLKLSEVIVGQYIRKEMIGNH PFIGEFDLFAVEGGTAAMTYLFNSIRENHLLKAGDTIALGMPIFTPYIEIPELNDYKLVELSVEADPGERWQYSNKELDK LRDPKVKAFFLVNPSNPPSVRMSDESLEYLASIIEERPDLIILTDDVYGTFADNFVSLFAMCPKNTILVYSFSKYFGATG WRLGVIATHRDNVFDEKIAALPDAARKELHERYTSITTEPDKLKFIDRLVADSRTVALNHTAGLSTPQQVQMVLFSLFSL MDTPDNYKIAMKRLIRNRKAALYREIGIAPEADDPNAVDYYTLLDIEALGGKALGPDFVKWVLASVEPNELLFRLAEDAG VVLLPGRGFGTRHPSGRVSLANLNESDYAKIGRSIRKLFEEYVEKYNEATGNKANKHVVKK >Mature_540_residues TKPDMSKLASLSPFELKDELIKLASSDADRLMLNAGRGNPNFLATIPRHGFWQLGLFAMRESERSFSYMPEGVGGFPRRE GIEERFDLFAREFAHVPGVSFLAGAVSYVRDQLGLNAGAFLYEMCEGILACNYPVPDRMLKLSEVIVGQYIRKEMIGNHP FIGEFDLFAVEGGTAAMTYLFNSIRENHLLKAGDTIALGMPIFTPYIEIPELNDYKLVELSVEADPGERWQYSNKELDKL RDPKVKAFFLVNPSNPPSVRMSDESLEYLASIIEERPDLIILTDDVYGTFADNFVSLFAMCPKNTILVYSFSKYFGATGW RLGVIATHRDNVFDEKIAALPDAARKELHERYTSITTEPDKLKFIDRLVADSRTVALNHTAGLSTPQQVQMVLFSLFSLM DTPDNYKIAMKRLIRNRKAALYREIGIAPEADDPNAVDYYTLLDIEALGGKALGPDFVKWVLASVEPNELLFRLAEDAGV VLLPGRGFGTRHPSGRVSLANLNESDYAKIGRSIRKLFEEYVEKYNEATGNKANKHVVKK
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322401, Length=150, Percent_Identity=32, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60722; Mature: 60591
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPDMSKLASLSPFELKDELIKLASSDADRLMLNAGRGNPNFLATIPRHGFWQLGLFAM CCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHH RESERSFSYMPEGVGGFPRREGIEERFDLFAREFAHVPGVSFLAGAVSYVRDQLGLNAGA HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHH FLYEMCEGILACNYPVPDRMLKLSEVIVGQYIRKEMIGNHPFIGEFDLFAVEGGTAAMTY HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHH LFNSIRENHLLKAGDTIALGMPIFTPYIEIPELNDYKLVELSVEADPGERWQYSNKELDK HHHHHHHCCCEECCCEEEECCCHHCCCEECCCCCCEEEEEEEEECCCCCCCCCCCCHHHH LRDPKVKAFFLVNPSNPPSVRMSDESLEYLASIIEERPDLIILTDDVYGTFADNFVSLFA HCCCCEEEEEEECCCCCCCEEECHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH MCPKNTILVYSFSKYFGATGWRLGVIATHRDNVFDEKIAALPDAARKELHERYTSITTEP HCCCCEEEEEEEHHHHCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCC DKLKFIDRLVADSRTVALNHTAGLSTPQQVQMVLFSLFSLMDTPDNYKIAMKRLIRNRKA HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ALYREIGIAPEADDPNAVDYYTLLDIEALGGKALGPDFVKWVLASVEPNELLFRLAEDAG HHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC VVLLPGRGFGTRHPSGRVSLANLNESDYAKIGRSIRKLFEEYVEKYNEATGNKANKHVVK EEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC K C >Mature Secondary Structure TKPDMSKLASLSPFELKDELIKLASSDADRLMLNAGRGNPNFLATIPRHGFWQLGLFAM CCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHH RESERSFSYMPEGVGGFPRREGIEERFDLFAREFAHVPGVSFLAGAVSYVRDQLGLNAGA HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHH FLYEMCEGILACNYPVPDRMLKLSEVIVGQYIRKEMIGNHPFIGEFDLFAVEGGTAAMTY HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHH LFNSIRENHLLKAGDTIALGMPIFTPYIEIPELNDYKLVELSVEADPGERWQYSNKELDK HHHHHHHCCCEECCCEEEECCCHHCCCEECCCCCCEEEEEEEEECCCCCCCCCCCCHHHH LRDPKVKAFFLVNPSNPPSVRMSDESLEYLASIIEERPDLIILTDDVYGTFADNFVSLFA HCCCCEEEEEEECCCCCCCEEECHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH MCPKNTILVYSFSKYFGATGWRLGVIATHRDNVFDEKIAALPDAARKELHERYTSITTEP HCCCCEEEEEEEHHHHCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCC DKLKFIDRLVADSRTVALNHTAGLSTPQQVQMVLFSLFSLMDTPDNYKIAMKRLIRNRKA HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ALYREIGIAPEADDPNAVDYYTLLDIEALGGKALGPDFVKWVLASVEPNELLFRLAEDAG HHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC VVLLPGRGFGTRHPSGRVSLANLNESDYAKIGRSIRKLFEEYVEKYNEATGNKANKHVVK EEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA