| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is dxr
Identifier: 73541564
GI number: 73541564
Start: 2052194
End: 2053381
Strand: Reverse
Name: dxr
Synonym: Reut_A1875
Alternate gene names: 73541564
Gene position: 2053381-2052194 (Counterclockwise)
Preceding gene: 73541565
Following gene: 73541563
Centisome position: 53.94
GC content: 64.73
Gene sequence:
>1188_bases ATGCATCGAATTACCATCCTGGGCGCTACTGGCTCGATCGGCGAAAGCACGCTCGACGTCGTACGGCGCCACGCCGACCG GTATGCGGTGCATGCCCTCACCGCACATCGGCAGGTGCAGAAGCTCGCGGCGAGTTGCATCGAGTTTCGCCCCGCCCGCG CTGTGGTGGGGACGTCGGAAGCCGCAGCCGAACTGGAAGCGCTGCTGCGCATGGCCGGTGTCAAGACCGAAGTCAGCCAC GGCGAAGCCGCGCTGGAATCGGTGGCCAGCGACGCGCAGACCGATTCGGTCATGGCTGCGATCGTCGGTGCAGCGGGGCT GCGTCCGACGCTGGCAGCGGCGCGCGCCGGCAAGCGCGTGCTGCTGGCCAACAAAGAAGCGCTGGTCATGTCCGGGCGCA TCTTCATGGATGCGGTCCGCGAACACGGCGCCACGCTACTGCCGATCGACAGCGAACACAATGCCATCTTCCAGTGCCTG CCGGCGAACGATCAGCGTTATCGGGCAGGCGTTGCCAAGGTCGTGTTGACCGCTTCGGGCGGCCCATTCCGTACGCGCGA TCCGGCGACGCTCCACGACATTACCCCGGACCAGGCCTGCGCCCATCCGAACTGGGTGATGGGTCGCAAGATCTCGGTGG ACTCGGCGACCATGATGAACAAGGGCCTGGAAGTCATCGAGGCCCATTGGCTGTTCGGGGCGCCGGCCGAGCACATCGAA GTGCTGATTCATCCGCAAAGCATCGTGCATTCGATGGTTGCCTACCGCGACGGATCGGTGCTTGCCCAACTCGGCAATCC CGACATGCGCACTCCGATCGCCTATGGGCTGGCTTATCCGGAGCGGATCGATGCAGGGGTTTCTCCGCTTGACCTGACGC TGGCCGGAGCCCTGAATTTCGAGAAACCGGATCTGGTGCGATTTCCTTGCCTGGCGCTTGCCTTCGACGCGCTTCGTGCC GGCGGTGTGGCGCCGGCCGTACTCAATGCCGCCAATGAGGTGGCTGTCGAAGCATTCCTGCAGGGCGGCATCCGCTTCAC CGACATCGCCAGGATCGTCGGCAACGTGCTGGAAAAAGCACCCCATGGTGCGGCTGACTCGCTCGAATGCGTGCTCGAGG CCGACCAGTTGGCGCGACAGTCCGCGCGTGCATGTCTGCAGGACGTGACAACAAGCGCCGTCCGCTGA
Upstream 100 bases:
>100_bases CTGGCCACGGCGGCGTGCTGGACCGCATTGACGCGCTGGTGCCGGTGTTCCCGCTGGCCGCGCTGATGGTGACCTATTTC TGAAGCTGCTCTGTTCTGAT
Downstream 100 bases:
>100_bases CGGCGGGGCCGGTGGCATCTGCGACAATGGTATTGCCGCCGCGACCGGCGCCTATGCCATCGCGACCTGCCCCCCGGCCC TGCCAACTTTCCTGACGACC
Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Products: NA
Alternate protein names: DXP reductoisomerase; 1-deoxyxylulose-5-phosphate reductoisomerase; 2-C-methyl-D-erythritol 4-phosphate synthase
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MHRITILGATGSIGESTLDVVRRHADRYAVHALTAHRQVQKLAASCIEFRPARAVVGTSEAAAELEALLRMAGVKTEVSH GEAALESVASDAQTDSVMAAIVGAAGLRPTLAAARAGKRVLLANKEALVMSGRIFMDAVREHGATLLPIDSEHNAIFQCL PANDQRYRAGVAKVVLTASGGPFRTRDPATLHDITPDQACAHPNWVMGRKISVDSATMMNKGLEVIEAHWLFGAPAEHIE VLIHPQSIVHSMVAYRDGSVLAQLGNPDMRTPIAYGLAYPERIDAGVSPLDLTLAGALNFEKPDLVRFPCLALAFDALRA GGVAPAVLNAANEVAVEAFLQGGIRFTDIARIVGNVLEKAPHGAADSLECVLEADQLARQSARACLQDVTTSAVR
Sequences:
>Translated_395_residues MHRITILGATGSIGESTLDVVRRHADRYAVHALTAHRQVQKLAASCIEFRPARAVVGTSEAAAELEALLRMAGVKTEVSH GEAALESVASDAQTDSVMAAIVGAAGLRPTLAAARAGKRVLLANKEALVMSGRIFMDAVREHGATLLPIDSEHNAIFQCL PANDQRYRAGVAKVVLTASGGPFRTRDPATLHDITPDQACAHPNWVMGRKISVDSATMMNKGLEVIEAHWLFGAPAEHIE VLIHPQSIVHSMVAYRDGSVLAQLGNPDMRTPIAYGLAYPERIDAGVSPLDLTLAGALNFEKPDLVRFPCLALAFDALRA GGVAPAVLNAANEVAVEAFLQGGIRFTDIARIVGNVLEKAPHGAADSLECVLEADQLARQSARACLQDVTTSAVR >Mature_395_residues MHRITILGATGSIGESTLDVVRRHADRYAVHALTAHRQVQKLAASCIEFRPARAVVGTSEAAAELEALLRMAGVKTEVSH GEAALESVASDAQTDSVMAAIVGAAGLRPTLAAARAGKRVLLANKEALVMSGRIFMDAVREHGATLLPIDSEHNAIFQCL PANDQRYRAGVAKVVLTASGGPFRTRDPATLHDITPDQACAHPNWVMGRKISVDSATMMNKGLEVIEAHWLFGAPAEHIE VLIHPQSIVHSMVAYRDGSVLAQLGNPDMRTPIAYGLAYPERIDAGVSPLDLTLAGALNFEKPDLVRFPCLALAFDALRA GGVAPAVLNAANEVAVEAFLQGGIRFTDIARIVGNVLEKAPHGAADSLECVLEADQLARQSARACLQDVTTSAVR
Specific function: Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
COG id: COG0743
COG function: function code I; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DXR family
Homologues:
Organism=Escherichia coli, GI1786369, Length=390, Percent_Identity=55.6410256410256, Blast_Score=405, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DXR_CUPPJ (Q470E3)
Other databases:
- EMBL: CP000090 - RefSeq: YP_296084.1 - ProteinModelPortal: Q470E3 - SMR: Q470E3 - GeneID: 3609554 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A1875 - NMPDR: fig|264198.3.peg.2405 - HOGENOM: HBG430762 - OMA: IHSMVEY - ProtClustDB: PRK05447 - BioCyc: REUT264198:REUT_A1875-MONOMER - HAMAP: MF_00183 - InterPro: IPR003821 - InterPro: IPR013644 - InterPro: IPR013512 - InterPro: IPR016040 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF006205 - TIGRFAMs: TIGR00243
Pfam domain/function: PF08436 DXP_redisom_C; PF02670 DXP_reductoisom
EC number: =1.1.1.267
Molecular weight: Translated: 41866; Mature: 41866
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: BINDING 125-125 BINDING 152-152 BINDING 179-179 BINDING 202-202 BINDING 224-224
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRITILGATGSIGESTLDVVRRHADRYAVHALTAHRQVQKLAASCIEFRPARAVVGTSE CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCHH AAAELEALLRMAGVKTEVSHGEAALESVASDAQTDSVMAAIVGAAGLRPTLAAARAGKRV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCEE LLANKEALVMSGRIFMDAVREHGATLLPIDSEHNAIFQCLPANDQRYRAGVAKVVLTASG EEECCCEEEECCHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCHHHHHCCEEEEEEECC GPFRTRDPATLHDITPDQACAHPNWVMGRKISVDSATMMNKGLEVIEAHWLFGAPAEHIE CCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECCCHHHHHHCCHHHHHHHHHCCCCHHHEE VLIHPQSIVHSMVAYRDGSVLAQLGNPDMRTPIAYGLAYPERIDAGVSPLDLTLAGALNF EEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHCCCCCCEEEEEEECCCC EKPDLVRFPCLALAFDALRAGGVAPAVLNAANEVAVEAFLQGGIRFTDIARIVGNVLEKA CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC PHGAADSLECVLEADQLARQSARACLQDVTTSAVR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHRITILGATGSIGESTLDVVRRHADRYAVHALTAHRQVQKLAASCIEFRPARAVVGTSE CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCHH AAAELEALLRMAGVKTEVSHGEAALESVASDAQTDSVMAAIVGAAGLRPTLAAARAGKRV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCEE LLANKEALVMSGRIFMDAVREHGATLLPIDSEHNAIFQCLPANDQRYRAGVAKVVLTASG EEECCCEEEECCHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCHHHHHCCEEEEEEECC GPFRTRDPATLHDITPDQACAHPNWVMGRKISVDSATMMNKGLEVIEAHWLFGAPAEHIE CCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECCCHHHHHHCCHHHHHHHHHCCCCHHHEE VLIHPQSIVHSMVAYRDGSVLAQLGNPDMRTPIAYGLAYPERIDAGVSPLDLTLAGALNF EEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHCCCCCCEEEEEEECCCC EKPDLVRFPCLALAFDALRAGGVAPAVLNAANEVAVEAFLQGGIRFTDIARIVGNVLEKA CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC PHGAADSLECVLEADQLARQSARACLQDVTTSAVR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA