| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is kshA [H]
Identifier: 73541266
GI number: 73541266
Start: 1698599
End: 1699675
Strand: Direct
Name: kshA [H]
Synonym: Reut_A1576
Alternate gene names: 73541266
Gene position: 1698599-1699675 (Clockwise)
Preceding gene: 73541265
Following gene: 73541270
Centisome position: 44.62
GC content: 64.25
Gene sequence:
>1077_bases ATGACAACTACCGGCTACAAGATCGAAACGCGCCCGCTCGAGGCCCGCTACGCGCGAGGCTGGCACTGCCTGGGACTGGC CGATGATTATCGCGACGGCAAGCCGCATACGCTGAACATCTTCGGCAAGCGCCTGGCGGCGTTTGCAGACTCGACGGGCG CTATCCGCATCGTCGACAGCTATTGCCCGCATATGGGGGCCGACCTCAGCACCGGCACCGTGCAGGGCGACAACCTGGTC TGCCCGTTCCACGGCTGGCAATGGGGCGGCGACGGCGGTTGCAAGTCGATTCCGTACTGCAAGCGCGTGCCGCCCAAGGC CCGCATCGGCAGCTGGGAGACTAGCGAGCAGAACCGGCTGCTGTTCGTCTGGCACGATCCGGAAGGCCGTCCGGCGCCGC GGGAGGTCGCCATTCCGCGCATCGACGCCTGCTTTGCGGCGGACTGGTCGGACTGGGCCATGGACAAGATGCTGATCGGC ACCAACTGCCGCGAGCTCGTCGACAATATCTCCGACATGGCGCATTTCGGCACCGTGCACGGCGCTCCGGTGGATTACTT CGCCAACCTGTTCGAACACCACAAGGCCACGCAGCTGATGATCGGGCGCAGCGCCCGGCTGTCGGGTGACTCGCGGCTGA CCGCGCACTCGACGTATTTCGGCCCGGCGTACCACATCACCGAGATGACGGGAAAGATGGGCGACCAGGAGATCCACTCG ATCCTGCTCAACTGCCATGTGCCGATCGACCTGAACAGCTTCGAGCTGCGCTACGGTGTGCTGGTCAAGAAGATACCGGG CCTGTCGGACGAGCAGAACCGCGCCGTGGCGCAAGCCTATGTAGAGCAGGCACGTGAGGCCTTCTACGAGGATGTGGCGA TCTGGGATAGCAAGATCCGCATCGACAATCCGCTGCTGTGCGAGGGCGACGGCCCCATCTACCAGATGCGTGACTGGTAC CAGCAGTTCTACACCGATGTGGAACAGGTGCGCCCCGCCAGCGTGGCGCGACGGGTGTTCGAGCTGAATCCTGGCGGCAT CGAACCGCCAACGCTGGGGCACGTGTTCGAGGCTTGA
Upstream 100 bases:
>100_bases CCGTGAAGGCGCACACAGAGCCTAGTCTGATGGGACGATGAGCGGCGTGCGCGCGCCTCGTATCGTGAAGCATCCACAGA GATCCAAGGAGACTGACGCC
Downstream 100 bases:
>100_bases GGCCTGAAGCTGGTGGCCAGGAGGGAGACGAAATGCGCGAAGGCGCATTTCGCCTTTTTCCGCTTAGCGTTGCGAAGGAA TATTGCCGCCGTCGACAACC
Product: Rieske (2Fe-2S) region
Products: NA
Alternate protein names: Rieske-type oxygenase; RO [H]
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTTTGYKIETRPLEARYARGWHCLGLADDYRDGKPHTLNIFGKRLAAFADSTGAIRIVDSYCPHMGADLSTGTVQGDNLV CPFHGWQWGGDGGCKSIPYCKRVPPKARIGSWETSEQNRLLFVWHDPEGRPAPREVAIPRIDACFAADWSDWAMDKMLIG TNCRELVDNISDMAHFGTVHGAPVDYFANLFEHHKATQLMIGRSARLSGDSRLTAHSTYFGPAYHITEMTGKMGDQEIHS ILLNCHVPIDLNSFELRYGVLVKKIPGLSDEQNRAVAQAYVEQAREAFYEDVAIWDSKIRIDNPLLCEGDGPIYQMRDWY QQFYTDVEQVRPASVARRVFELNPGGIEPPTLGHVFEA
Sequences:
>Translated_358_residues MTTTGYKIETRPLEARYARGWHCLGLADDYRDGKPHTLNIFGKRLAAFADSTGAIRIVDSYCPHMGADLSTGTVQGDNLV CPFHGWQWGGDGGCKSIPYCKRVPPKARIGSWETSEQNRLLFVWHDPEGRPAPREVAIPRIDACFAADWSDWAMDKMLIG TNCRELVDNISDMAHFGTVHGAPVDYFANLFEHHKATQLMIGRSARLSGDSRLTAHSTYFGPAYHITEMTGKMGDQEIHS ILLNCHVPIDLNSFELRYGVLVKKIPGLSDEQNRAVAQAYVEQAREAFYEDVAIWDSKIRIDNPLLCEGDGPIYQMRDWY QQFYTDVEQVRPASVARRVFELNPGGIEPPTLGHVFEA >Mature_357_residues TTTGYKIETRPLEARYARGWHCLGLADDYRDGKPHTLNIFGKRLAAFADSTGAIRIVDSYCPHMGADLSTGTVQGDNLVC PFHGWQWGGDGGCKSIPYCKRVPPKARIGSWETSEQNRLLFVWHDPEGRPAPREVAIPRIDACFAADWSDWAMDKMLIGT NCRELVDNISDMAHFGTVHGAPVDYFANLFEHHKATQLMIGRSARLSGDSRLTAHSTYFGPAYHITEMTGKMGDQEIHSI LLNCHVPIDLNSFELRYGVLVKKIPGLSDEQNRAVAQAYVEQAREAFYEDVAIWDSKIRIDNPLLCEGDGPIYQMRDWYQ QFYTDVEQVRPASVARRVFELNPGGIEPPTLGHVFEA
Specific function: Catalyzes the opening of ring B of 1,4-androstadiene- 3,17,-dione (ADD) and 4-androstene-3,17-dione (ADD) with concomitant aromatization of ring A. The ring B is subsequently hydroxylated to yield a catechol and then subject to meta- cleavage [H]
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI71983709, Length=343, Percent_Identity=24.4897959183673, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI161085896, Length=335, Percent_Identity=25.0746268656716, Blast_Score=123, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 40222; Mature: 40091
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTGYKIETRPLEARYARGWHCLGLADDYRDGKPHTLNIFGKRLAAFADSTGAIRIVDS CCCCCCEEECCCCHHHHCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEHH YCPHMGADLSTGTVQGDNLVCPFHGWQWGGDGGCKSIPYCKRVPPKARIGSWETSEQNRL HCCCCCCCCCCCEECCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEE LFVWHDPEGRPAPREVAIPRIDACFAADWSDWAMDKMLIGTNCRELVDNISDMAHFGTVH EEEEECCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC GAPVDYFANLFEHHKATQLMIGRSARLSGDSRLTAHSTYFGPAYHITEMTGKMGDQEIHS CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCEEEEHHHHHCCCHHHHHH ILLNCHVPIDLNSFELRYGVLVKKIPGLSDEQNRAVAQAYVEQAREAFYEDVAIWDSKIR HHHHCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE IDNPLLCEGDGPIYQMRDWYQQFYTDVEQVRPASVARRVFELNPGGIEPPTLGHVFEA ECCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHCCC >Mature Secondary Structure TTTGYKIETRPLEARYARGWHCLGLADDYRDGKPHTLNIFGKRLAAFADSTGAIRIVDS CCCCCEEECCCCHHHHCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEHH YCPHMGADLSTGTVQGDNLVCPFHGWQWGGDGGCKSIPYCKRVPPKARIGSWETSEQNRL HCCCCCCCCCCCEECCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEE LFVWHDPEGRPAPREVAIPRIDACFAADWSDWAMDKMLIGTNCRELVDNISDMAHFGTVH EEEEECCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC GAPVDYFANLFEHHKATQLMIGRSARLSGDSRLTAHSTYFGPAYHITEMTGKMGDQEIHS CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCEEEEHHHHHCCCHHHHHH ILLNCHVPIDLNSFELRYGVLVKKIPGLSDEQNRAVAQAYVEQAREAFYEDVAIWDSKIR HHHHCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE IDNPLLCEGDGPIYQMRDWYQQFYTDVEQVRPASVARRVFELNPGGIEPPTLGHVFEA ECCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA