Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is yceG [C]
Identifier: 73541127
GI number: 73541127
Start: 1548497
End: 1549492
Strand: Direct
Name: yceG [C]
Synonym: Reut_A1433
Alternate gene names: 73541127
Gene position: 1548497-1549492 (Clockwise)
Preceding gene: 73541123
Following gene: 73541128
Centisome position: 40.68
GC content: 65.86
Gene sequence:
>996_bases ATGACACGTCTTTTTCTACGCCTGGGACTGCTCGTCCTCGTTCTTGCCCTGGCTGCCGCCGGCGCTTTCGCGTGGTGGGC CAACCAGCCGCTGGGCCTGTCCGCCTCGCCTGTCGAAGTCGTCATCAAGCCGAATTCCGGTGTCGCCAGCGTCGGCCGCC AGCTCCAGCGCGGCGGCGTGAGCATGGACCCGCGCCTGTTCCAGTTGCTGGCGCGGCTGACCGGCCATGGTCCGGACCTG AAGGCAGGCGGCTATACATTCGAAACGGGCATTACGCCGATGGGTGTGGTCGGCAAGCTCGCACGCGGCGAAGTCACGCA CTATGTCGTCACCGTGATCGAGGGCTGGGAATTCCGCAAGATGCGCGCCGCGGTGGATGCCAGCCCGGCTCTGCGCCATG ACACGAAGGACATGTCGGACGCCGATCTGATGAAGGCGATTGGCGCCACGGAAGATGCCCCGGAAGGGCTCTTCTTCCCC GACACCTACCTGTTCGCGCGCGGCAGCAGCGATATCGAGCTGTACCGCCATGCCTACAAGGCCATGCAGCGGCGGCTGAA CGAGGCCTGGAACGCGCGCTCCGCGGACCTGCCGTACAAGACCCCGTACGAGGCGCTGGTGATGGCGTCGATCGTCGAGA AGGAAACCGGCCAGGCCACCGAGCGCCCGATGATCGCCGCGGTGTTTGTCAACCGCCTGCGCAAGAACATGATGCTCCAG ACCGACCCGACCGTGATCTACGGCATTGGCGAGCGCTTCGACGGCAACCTGCGCAAGCGCGACCTGCAGACCGACACGCC GTACAATACCTACACCCGTACCGGCCTGCCGCCCACGCCGATCGCGCTGCCGGGCCTGGCTTCGCTGGCCGCGGCTACCG CGCCGGCCCCGTCCGATGCGCTGTATTTCGTGGCGCGCGGCGACGGTACCAGCCATTTCTCCAATACGCTTCCCGAACAC AACCGCGCGGTAGATCAGTACCAGCGCGGCAAATAA
Upstream 100 bases:
>100_bases CCCGGTATTATATGAGGCTGCCGGCATTTCAGCCGGCGCCGGCAGCGCGCGGCTGGGACATCACCCGCAGTCCGGACGCT GCCGCGACCGAACGGATTTC
Downstream 100 bases:
>100_bases GCATCCATGCGCGGAAAATTCATTACCTTCGAAGGCATCGACGGCGCCGGCAAGAGCACCCATATCGGCGCGGTGGCGGC GCGGCTGCGCGAGCGCAAGG
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTRLFLRLGLLVLVLALAAAGAFAWWANQPLGLSASPVEVVIKPNSGVASVGRQLQRGGVSMDPRLFQLLARLTGHGPDL KAGGYTFETGITPMGVVGKLARGEVTHYVVTVIEGWEFRKMRAAVDASPALRHDTKDMSDADLMKAIGATEDAPEGLFFP DTYLFARGSSDIELYRHAYKAMQRRLNEAWNARSADLPYKTPYEALVMASIVEKETGQATERPMIAAVFVNRLRKNMMLQ TDPTVIYGIGERFDGNLRKRDLQTDTPYNTYTRTGLPPTPIALPGLASLAAATAPAPSDALYFVARGDGTSHFSNTLPEH NRAVDQYQRGK
Sequences:
>Translated_331_residues MTRLFLRLGLLVLVLALAAAGAFAWWANQPLGLSASPVEVVIKPNSGVASVGRQLQRGGVSMDPRLFQLLARLTGHGPDL KAGGYTFETGITPMGVVGKLARGEVTHYVVTVIEGWEFRKMRAAVDASPALRHDTKDMSDADLMKAIGATEDAPEGLFFP DTYLFARGSSDIELYRHAYKAMQRRLNEAWNARSADLPYKTPYEALVMASIVEKETGQATERPMIAAVFVNRLRKNMMLQ TDPTVIYGIGERFDGNLRKRDLQTDTPYNTYTRTGLPPTPIALPGLASLAAATAPAPSDALYFVARGDGTSHFSNTLPEH NRAVDQYQRGK >Mature_330_residues TRLFLRLGLLVLVLALAAAGAFAWWANQPLGLSASPVEVVIKPNSGVASVGRQLQRGGVSMDPRLFQLLARLTGHGPDLK AGGYTFETGITPMGVVGKLARGEVTHYVVTVIEGWEFRKMRAAVDASPALRHDTKDMSDADLMKAIGATEDAPEGLFFPD TYLFARGSSDIELYRHAYKAMQRRLNEAWNARSADLPYKTPYEALVMASIVEKETGQATERPMIAAVFVNRLRKNMMLQT DPTVIYGIGERFDGNLRKRDLQTDTPYNTYTRTGLPPTPIALPGLASLAAATAPAPSDALYFVARGDGTSHFSNTLPEHN RAVDQYQRGK
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=287, Percent_Identity=40.418118466899, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36184; Mature: 36053
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLFLRLGLLVLVLALAAAGAFAWWANQPLGLSASPVEVVIKPNSGVASVGRQLQRGGV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCC SMDPRLFQLLARLTGHGPDLKAGGYTFETGITPMGVVGKLARGEVTHYVVTVIEGWEFRK CCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHEEEEEECCCCHHHH MRAAVDASPALRHDTKDMSDADLMKAIGATEDAPEGLFFPDTYLFARGSSDIELYRHAYK HHHHHCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH AMQRRLNEAWNARSADLPYKTPYEALVMASIVEKETGQATERPMIAAVFVNRLRKNMMLQ HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHCEEE TDPTVIYGIGERFDGNLRKRDLQTDTPYNTYTRTGLPPTPIALPGLASLAAATAPAPSDA CCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC LYFVARGDGTSHFSNTLPEHNRAVDQYQRGK EEEEEECCCCHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure TRLFLRLGLLVLVLALAAAGAFAWWANQPLGLSASPVEVVIKPNSGVASVGRQLQRGGV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCC SMDPRLFQLLARLTGHGPDLKAGGYTFETGITPMGVVGKLARGEVTHYVVTVIEGWEFRK CCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHEEEEEECCCCHHHH MRAAVDASPALRHDTKDMSDADLMKAIGATEDAPEGLFFPDTYLFARGSSDIELYRHAYK HHHHHCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH AMQRRLNEAWNARSADLPYKTPYEALVMASIVEKETGQATERPMIAAVFVNRLRKNMMLQ HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHCEEE TDPTVIYGIGERFDGNLRKRDLQTDTPYNTYTRTGLPPTPIALPGLASLAAATAPAPSDA CCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC LYFVARGDGTSHFSNTLPEHNRAVDQYQRGK EEEEEECCCCHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]