| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is thlA [H]
Identifier: 73541047
GI number: 73541047
Start: 1455089
End: 1456273
Strand: Direct
Name: thlA [H]
Synonym: Reut_A1353
Alternate gene names: 73541047
Gene position: 1455089-1456273 (Clockwise)
Preceding gene: 73541046
Following gene: 73541048
Centisome position: 38.23
GC content: 66.33
Gene sequence:
>1185_bases ATGACGCGTGAAGTCGTGGTAGTGAGTGGCGTACGTACGGCAATCGGCACTTTCGGCGGCAGCCTGAAGGACATGGCACC GACCCAACTGGGTGCACTCGTGGTGCGCGAGGCGCTGGCCCGTGCTCAGGTGTCGGGCGACGATGTTGGTCACGTGGTGT TCGGTAACGTGATTCAGACCGAGCCGCGCGACATGTATCTGGGCCGCGTGGCGGCCGTCGATGGCGGTGTGACGATCAAT GCGCCTGCGCTGACCGTGAACCGCCTGTGCGGCTCGGGCCTGCAAGCCATCGTCAGCGCCGCGCAGACCATTCTGCTCGG CGACGCCGACGTGGCCATCGGCGGCGGTGCGGAAAGCATGAGCCGCGCGCCGTACCTGGCGCCCGCAGTTCGCTGGGGCG CGCGCATGGGCGATGCCAGCATGGTCGACATGATGCTGGGCGCGCTGCATGACCCGTTCCACCGCATTCACATGGGTGTC ACGGCCGAGAACGTGGCCAAGGAATACGACATCACGCGCAGCCAGCAGGACGAAGCCGCGCTGGAATCGCACCGTCGCGC TTCGGCCGCGATCAAGGCTGGTTACTTCAAGGACCAGATCGTTCCGGTGACGCTCAAGACCCGCAAGGGCGAGGTGAGCT TCGACACCGACGAGCACGTGCGTCACGACGCCACGATCGACGACATGACCAAGCTCAAGCCGGTCTTCGTCAAGGAAAAC GGCACCGTGACGGCGGGCAATGCCTCCGGCCTGAACGACGCCGCTGCGGCTGTCGTGCTGATGGAGCGCGCCGAAGCCGA GCGCCGTGACCTGAAGCCGCTGGCTCGCCTGGTGTCGTATGGCCACGCTGGCGTGGATCCGAAGACCATGGGTATCGGCC CGGTGCCGGCTACCAAGAAGGCGCTGGAGCGCGCTGGCCTGTCGGTGTCCGACCTGGACGTGATCGAAGCCAACGAAGCG TTTGCCGCGCAGGCTTGCGCGGTGACCAAGGCGCTGGGCCTGGACCCGGCCAAGGTCAATCCCAACGGTTCCGGCATTTC GCTTGGCCACCCGATCGGCGCCACCGGCGCGCTGATCACGGTCAAGGCGTTGCATGAGCTGCAACGCGTGCAGGGCCGCT ATGCGCTGGTGACGATGTGCATCGGCGGCGGCCAGGGCATTGCCGCCATCTTCGAGCGCATCTGA
Upstream 100 bases:
>100_bases TGCAACGGGCTTCTGCTGCCCTTAAGTAAAAGTACGATCGTTCGATTCCGTCGCGATGCCGCTATACTGTGCACCGCAAC ATAACCTCATGGAGAGAGAC
Downstream 100 bases:
>100_bases GTCTTGTTGATGTGTCGTCGCACCCCGTTGCAGCGCCGTTCGCTCGTCAGCCTGGCTGCCGCGCTGGCGCTTGCGGGGGC GATGCCGGTGCGGGCCGCCG
Product: beta-ketothiolase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTREVVVVSGVRTAIGTFGGSLKDMAPTQLGALVVREALARAQVSGDDVGHVVFGNVIQTEPRDMYLGRVAAVDGGVTIN APALTVNRLCGSGLQAIVSAAQTILLGDADVAIGGGAESMSRAPYLAPAVRWGARMGDASMVDMMLGALHDPFHRIHMGV TAENVAKEYDITRSQQDEAALESHRRASAAIKAGYFKDQIVPVTLKTRKGEVSFDTDEHVRHDATIDDMTKLKPVFVKEN GTVTAGNASGLNDAAAAVVLMERAEAERRDLKPLARLVSYGHAGVDPKTMGIGPVPATKKALERAGLSVSDLDVIEANEA FAAQACAVTKALGLDPAKVNPNGSGISLGHPIGATGALITVKALHELQRVQGRYALVTMCIGGGQGIAAIFERI
Sequences:
>Translated_394_residues MTREVVVVSGVRTAIGTFGGSLKDMAPTQLGALVVREALARAQVSGDDVGHVVFGNVIQTEPRDMYLGRVAAVDGGVTIN APALTVNRLCGSGLQAIVSAAQTILLGDADVAIGGGAESMSRAPYLAPAVRWGARMGDASMVDMMLGALHDPFHRIHMGV TAENVAKEYDITRSQQDEAALESHRRASAAIKAGYFKDQIVPVTLKTRKGEVSFDTDEHVRHDATIDDMTKLKPVFVKEN GTVTAGNASGLNDAAAAVVLMERAEAERRDLKPLARLVSYGHAGVDPKTMGIGPVPATKKALERAGLSVSDLDVIEANEA FAAQACAVTKALGLDPAKVNPNGSGISLGHPIGATGALITVKALHELQRVQGRYALVTMCIGGGQGIAAIFERI >Mature_393_residues TREVVVVSGVRTAIGTFGGSLKDMAPTQLGALVVREALARAQVSGDDVGHVVFGNVIQTEPRDMYLGRVAAVDGGVTINA PALTVNRLCGSGLQAIVSAAQTILLGDADVAIGGGAESMSRAPYLAPAVRWGARMGDASMVDMMLGALHDPFHRIHMGVT AENVAKEYDITRSQQDEAALESHRRASAAIKAGYFKDQIVPVTLKTRKGEVSFDTDEHVRHDATIDDMTKLKPVFVKENG TVTAGNASGLNDAAAAVVLMERAEAERRDLKPLARLVSYGHAGVDPKTMGIGPVPATKKALERAGLSVSDLDVIEANEAF AAQACAVTKALGLDPAKVNPNGSGISLGHPIGATGALITVKALHELQRVQGRYALVTMCIGGGQGIAAIFERI
Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI148539872, Length=391, Percent_Identity=47.3145780051151, Blast_Score=362, Evalue=1e-100, Organism=Homo sapiens, GI167614485, Length=393, Percent_Identity=45.8015267175573, Blast_Score=355, Evalue=3e-98, Organism=Homo sapiens, GI4557237, Length=400, Percent_Identity=41, Blast_Score=281, Evalue=8e-76, Organism=Homo sapiens, GI4501853, Length=396, Percent_Identity=41.1616161616162, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI4504327, Length=425, Percent_Identity=35.7647058823529, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI194353979, Length=391, Percent_Identity=31.2020460358056, Blast_Score=148, Evalue=1e-35, Organism=Escherichia coli, GI1788554, Length=398, Percent_Identity=50.251256281407, Blast_Score=347, Evalue=7e-97, Organism=Escherichia coli, GI87082165, Length=392, Percent_Identity=46.1734693877551, Blast_Score=333, Evalue=1e-92, Organism=Escherichia coli, GI1787663, Length=401, Percent_Identity=45.3865336658354, Blast_Score=315, Evalue=3e-87, Organism=Escherichia coli, GI48994986, Length=399, Percent_Identity=40.1002506265664, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI1788683, Length=412, Percent_Identity=33.252427184466, Blast_Score=204, Evalue=1e-53, Organism=Caenorhabditis elegans, GI133906874, Length=391, Percent_Identity=46.8030690537084, Blast_Score=360, Evalue=1e-99, Organism=Caenorhabditis elegans, GI25147385, Length=394, Percent_Identity=36.8020304568528, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI17535921, Length=396, Percent_Identity=33.8383838383838, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17551802, Length=424, Percent_Identity=31.6037735849057, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17535917, Length=406, Percent_Identity=28.0788177339901, Blast_Score=157, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6325229, Length=406, Percent_Identity=39.1625615763547, Blast_Score=273, Evalue=5e-74, Organism=Saccharomyces cerevisiae, GI6322031, Length=399, Percent_Identity=36.5914786967419, Blast_Score=223, Evalue=4e-59, Organism=Drosophila melanogaster, GI24655093, Length=392, Percent_Identity=45.4081632653061, Blast_Score=345, Evalue=3e-95, Organism=Drosophila melanogaster, GI17648125, Length=395, Percent_Identity=45.3164556962025, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24640423, Length=397, Percent_Identity=41.0579345088161, Blast_Score=282, Evalue=3e-76, Organism=Drosophila melanogaster, GI17137578, Length=427, Percent_Identity=33.0210772833724, Blast_Score=186, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 41145; Mature: 41013
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00098 THIOLASE_1 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTREVVVVSGVRTAIGTFGGSLKDMAPTQLGALVVREALARAQVSGDDVGHVVFGNVIQT CCCCEEEECCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC EPRDMYLGRVAAVDGGVTINAPALTVNRLCGSGLQAIVSAAQTILLGDADVAIGGGAESM CCHHHHHEEEEEECCCEEECCCHHHHHHHHCCHHHHHHHHHHHEEECCCCEEECCCHHHH SRAPYLAPAVRWGARMGDASMVDMMLGALHDPFHRIHMGVTAENVAKEYDITRSQQDEAA CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHH LESHRRASAAIKAGYFKDQIVPVTLKTRKGEVSFDTDEHVRHDATIDDMTKLKPVFVKEN HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHCCEEEEECC GTVTAGNASGLNDAAAAVVLMERAEAERRDLKPLARLVSYGHAGVDPKTMGIGPVPATKK CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH ALERAGLSVSDLDVIEANEAFAAQACAVTKALGLDPAKVNPNGSGISLGHPIGATGALIT HHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCCEECCCCCCCCCHHHH VKALHELQRVQGRYALVTMCIGGGQGIAAIFERI HHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCC >Mature Secondary Structure TREVVVVSGVRTAIGTFGGSLKDMAPTQLGALVVREALARAQVSGDDVGHVVFGNVIQT CCCEEEECCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC EPRDMYLGRVAAVDGGVTINAPALTVNRLCGSGLQAIVSAAQTILLGDADVAIGGGAESM CCHHHHHEEEEEECCCEEECCCHHHHHHHHCCHHHHHHHHHHHEEECCCCEEECCCHHHH SRAPYLAPAVRWGARMGDASMVDMMLGALHDPFHRIHMGVTAENVAKEYDITRSQQDEAA CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHH LESHRRASAAIKAGYFKDQIVPVTLKTRKGEVSFDTDEHVRHDATIDDMTKLKPVFVKEN HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHCCEEEEECC GTVTAGNASGLNDAAAAVVLMERAEAERRDLKPLARLVSYGHAGVDPKTMGIGPVPATKK CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH ALERAGLSVSDLDVIEANEAFAAQACAVTKALGLDPAKVNPNGSGISLGHPIGATGALIT HHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCCEECCCCCCCCCHHHH VKALHELQRVQGRYALVTMCIGGGQGIAAIFERI HHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7867955; 11075929; 11466286; 1685080 [H]