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The map label for this gene is bdlA [H]

Identifier: 73540475

GI number: 73540475

Start: 836314

End: 837543

Strand: Reverse

Name: bdlA [H]

Synonym: Reut_A0771

Alternate gene names: 73540475

Gene position: 837543-836314 (Counterclockwise)

Preceding gene: 73540476

Following gene: 229220876

Centisome position: 22.0

GC content: 64.72

Gene sequence:

>1230_bases
ATGCCGGGCGGCTTTTTTCTTTGCGGCGACGCCATCGGTCTTTGCAGTAATCCACAGCACACCCTCTACGCACCAAAAGT
GCGCAATGATTGGCACAAATCTTGCCATTCCCCCGAAGCAAGGGCGCCTCGCCACGATCAGGCGCCCGAAAGAATAATCA
TCAAAGGGAGAAAGCAATTGGCAAGTGCCGACCGCATCGTTGAACTGTCCCACCACGTCGGCCGCGTCGCGGACGGAAAG
ATCTCGGGCATTGCGGAGATCAACCGCGAAACGAAATTCCTGGCGCTGAACGCGTTGATCGAAGCCGCGCGCGCCGGCGA
TGCGGGCCGCGGCTTCAGCGTCGTGGCCAGCCAGGTCAAGCAGGTGTCCGAACGCATCTCGGCGATCACAGCCGAACTCA
ACAGCGAGCTCGCAGGCTCGATCGCGGAACTGACGCAACTCGGCGACGCCATGATCCGGCAGATGCGCGACCACCAGGGC
CAGCGCTTTGCCGACATGGCACTGAACATGATCGAACTGATCGACCGCAACCTCTACGAGCGCTCGTGCGATGTCCGCTG
GTGGGCCACCGACGCAGCCATCGTGGCCGCCGCCGCGCAGCCTGAGCCATCGACGTGCGCGTGGGCCAGCAAGCGGCTCG
GCGTGATCCTGGACAGCTATACGGTCTATCTGGATCTGTGGGTCATCGACGCGCAGGGCCGCGTGCTGGCCAACGGCCGG
CCCGGCACCTACGGCAGCGTGACCGGGAAGATGGTGTCGGGCGTGGACTGGTTTCGCCGCGCCATGGGCACTGCCTCGGG
CCAGGACTACATCTCGCACGACATCGCCGTGTCGCGCTTCCTGAACCAGTCCGAAGTGGCCACCTACGCCACCGCGATCC
GCGCCGATGGCAAGGCCGATGGAGAGCCGATCGGCGTGCTGGCGATCTTCTTCGACTGGGCTCCGCAAGCCGACGCGGTG
GTGAAGCATGTGCGGCTGTCGCAGGAGGAATGGCGCGGCACGCGTTGCCTGCTGCTCGATTCCGGACGCCGCGTGATCGC
CGCATCCGATGGCGTCGGCGTGCTCGACGAGGTGTTCCCGCTCCAGGATGGGAACGCCCCATCCGGCTTCTATACGGACA
AGGCGGGCCGGCTGGTCGCCTTTGCGCGTACGCCGGGCTACGAAACCTACCCCGGCATGGGTTGGTATGGGGTAATCGTC
CACGACCACGGGCAACCACCCTGCCACTGA

Upstream 100 bases:

>100_bases
ATACGCCGCGCTTCGTCGGCCACCTCGAAGATCAGTTCACGCATTTGGTCGGCGCCCTGGGCTGAGCTGAACGGCGCTCC
ATGCAGAAGCCGCTCGGCGC

Downstream 100 bases:

>100_bases
AGCCCGGTCGAAATCTTGCGCGGCGTGCCTCGGGCGCCGCGCCAGCACCCGGCTATCCAAGCGGCTGGCCCGGGCGCGCT
CCTCCATTGCCTGCCTTGGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MPGGFFLCGDAIGLCSNPQHTLYAPKVRNDWHKSCHSPEARAPRHDQAPERIIIKGRKQLASADRIVELSHHVGRVADGK
ISGIAEINRETKFLALNALIEAARAGDAGRGFSVVASQVKQVSERISAITAELNSELAGSIAELTQLGDAMIRQMRDHQG
QRFADMALNMIELIDRNLYERSCDVRWWATDAAIVAAAAQPEPSTCAWASKRLGVILDSYTVYLDLWVIDAQGRVLANGR
PGTYGSVTGKMVSGVDWFRRAMGTASGQDYISHDIAVSRFLNQSEVATYATAIRADGKADGEPIGVLAIFFDWAPQADAV
VKHVRLSQEEWRGTRCLLLDSGRRVIAASDGVGVLDEVFPLQDGNAPSGFYTDKAGRLVAFARTPGYETYPGMGWYGVIV
HDHGQPPCH

Sequences:

>Translated_409_residues
MPGGFFLCGDAIGLCSNPQHTLYAPKVRNDWHKSCHSPEARAPRHDQAPERIIIKGRKQLASADRIVELSHHVGRVADGK
ISGIAEINRETKFLALNALIEAARAGDAGRGFSVVASQVKQVSERISAITAELNSELAGSIAELTQLGDAMIRQMRDHQG
QRFADMALNMIELIDRNLYERSCDVRWWATDAAIVAAAAQPEPSTCAWASKRLGVILDSYTVYLDLWVIDAQGRVLANGR
PGTYGSVTGKMVSGVDWFRRAMGTASGQDYISHDIAVSRFLNQSEVATYATAIRADGKADGEPIGVLAIFFDWAPQADAV
VKHVRLSQEEWRGTRCLLLDSGRRVIAASDGVGVLDEVFPLQDGNAPSGFYTDKAGRLVAFARTPGYETYPGMGWYGVIV
HDHGQPPCH
>Mature_408_residues
PGGFFLCGDAIGLCSNPQHTLYAPKVRNDWHKSCHSPEARAPRHDQAPERIIIKGRKQLASADRIVELSHHVGRVADGKI
SGIAEINRETKFLALNALIEAARAGDAGRGFSVVASQVKQVSERISAITAELNSELAGSIAELTQLGDAMIRQMRDHQGQ
RFADMALNMIELIDRNLYERSCDVRWWATDAAIVAAAAQPEPSTCAWASKRLGVILDSYTVYLDLWVIDAQGRVLANGRP
GTYGSVTGKMVSGVDWFRRAMGTASGQDYISHDIAVSRFLNQSEVATYATAIRADGKADGEPIGVLAIFFDWAPQADAVV
KHVRLSQEEWRGTRCLLLDSGRRVIAASDGVGVLDEVFPLQDGNAPSGFYTDKAGRLVAFARTPGYETYPGMGWYGVIVH
DHGQPPCH

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 44529; Mature: 44398

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGGFFLCGDAIGLCSNPQHTLYAPKVRNDWHKSCHSPEARAPRHDQAPERIIIKGRKQL
CCCCEEEECCCCCCCCCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCHHHH
ASADRIVELSHHVGRVADGKISGIAEINRETKFLALNALIEAARAGDAGRGFSVVASQVK
HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
QVSERISAITAELNSELAGSIAELTQLGDAMIRQMRDHQGQRFADMALNMIELIDRNLYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RSCDVRWWATDAAIVAAAAQPEPSTCAWASKRLGVILDSYTVYLDLWVIDAQGRVLANGR
HCCCEEEEECCCEEEEECCCCCCCCHHHHHHCCCEEEECEEEEEEEEEEECCCEEEECCC
PGTYGSVTGKMVSGVDWFRRAMGTASGQDYISHDIAVSRFLNQSEVATYATAIRADGKAD
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
GEPIGVLAIFFDWAPQADAVVKHVRLSQEEWRGTRCLLLDSGRRVIAASDGVGVLDEVFP
CCCEEEEEEEECCCCCHHHHHHHHHCCHHHCCCCEEEEEECCCEEEEECCCCCHHHHHCC
LQDGNAPSGFYTDKAGRLVAFARTPGYETYPGMGWYGVIVHDHGQPPCH
CCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
PGGFFLCGDAIGLCSNPQHTLYAPKVRNDWHKSCHSPEARAPRHDQAPERIIIKGRKQL
CCCEEEECCCCCCCCCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCHHHH
ASADRIVELSHHVGRVADGKISGIAEINRETKFLALNALIEAARAGDAGRGFSVVASQVK
HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
QVSERISAITAELNSELAGSIAELTQLGDAMIRQMRDHQGQRFADMALNMIELIDRNLYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RSCDVRWWATDAAIVAAAAQPEPSTCAWASKRLGVILDSYTVYLDLWVIDAQGRVLANGR
HCCCEEEEECCCEEEEECCCCCCCCHHHHHHCCCEEEECEEEEEEEEEEECCCEEEECCC
PGTYGSVTGKMVSGVDWFRRAMGTASGQDYISHDIAVSRFLNQSEVATYATAIRADGKAD
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
GEPIGVLAIFFDWAPQADAVVKHVRLSQEEWRGTRCLLLDSGRRVIAASDGVGVLDEVFP
CCCEEEEEEEECCCCCHHHHHHHHHCCHHHCCCCEEEEEECCCEEEEECCCCCHHHHHCC
LQDGNAPSGFYTDKAGRLVAFARTPGYETYPGMGWYGVIVHDHGQPPCH
CCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]