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The map label for this gene is nusB [H]

Identifier: 73540472

GI number: 73540472

Start: 833901

End: 834404

Strand: Reverse

Name: nusB [H]

Synonym: Reut_A0768

Alternate gene names: 73540472

Gene position: 834404-833901 (Counterclockwise)

Preceding gene: 73540473

Following gene: 73540471

Centisome position: 21.92

GC content: 67.46

Gene sequence:

>504_bases
ATGAGTGACACGCCTGAAACCGGCAAGCCGGCGGCTGGCACCAAGCCCGCTGCCCGCACCGAGGCCAAGGCGCCGCCCAA
GAGCGCGCGCCGCCGCTCGCGCGAGCTGGCTCTGCAGGGCCTGTACCAATGGCTGCTGAACCGCAACGACATCGGCGCGA
TCCAGGCCCACCTGCATGACGCCCAGGGCTTCAACAAGGCCGACAGCGAGCACTTCGACGCGCTGCTCAATGGCGCCGTG
CGCGAAGAAGCGCGCCTGACGGCGGCGTTCGAGCCGTTCCTGGACCGCAAGGTCGAGGAACTGTCGCCGGTCGAGCGTGC
CGCCCTGCTGGTGGGCAGCTACGAACTCGTGCACTGCGTCGACATTCCGTACAAGGTCGTCATCAATGAAGCCGTCGAGC
TGACCAAGACCTTTGGCGGAGTCGAGGGCTACAAGTACGTGAACGGCGTGCTGGACAAGCTGGCCGCCCAAGTACGGTCG
GCCGAGGTCGCGGCGCGCCGCTGA

Upstream 100 bases:

>100_bases
AAGGGCCGCGACTGCGCCCGCGCCGCCGTGGAAATGGCCAACCTGGTTGTCGCGCTCGATTCGCTGCGCGATCAGGAAGA
TGAAGAAGACGAGGACGACG

Downstream 100 bases:

>100_bases
AGCGCCGGGGTTCAACGCCCAGCCGCAACGGATACGACACCCGCTGACGCGGGTGTTTTTACTTCTATCACCCGCCCGGG
AACGGGCATCGCCGAATCGC

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSDTPETGKPAAGTKPAARTEAKAPPKSARRRSRELALQGLYQWLLNRNDIGAIQAHLHDAQGFNKADSEHFDALLNGAV
REEARLTAAFEPFLDRKVEELSPVERAALLVGSYELVHCVDIPYKVVINEAVELTKTFGGVEGYKYVNGVLDKLAAQVRS
AEVAARR

Sequences:

>Translated_167_residues
MSDTPETGKPAAGTKPAARTEAKAPPKSARRRSRELALQGLYQWLLNRNDIGAIQAHLHDAQGFNKADSEHFDALLNGAV
REEARLTAAFEPFLDRKVEELSPVERAALLVGSYELVHCVDIPYKVVINEAVELTKTFGGVEGYKYVNGVLDKLAAQVRS
AEVAARR
>Mature_166_residues
SDTPETGKPAAGTKPAARTEAKAPPKSARRRSRELALQGLYQWLLNRNDIGAIQAHLHDAQGFNKADSEHFDALLNGAVR
EEARLTAAFEPFLDRKVEELSPVERAALLVGSYELVHCVDIPYKVVINEAVELTKTFGGVEGYKYVNGVLDKLAAQVRSA
EVAARR

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

Organism=Escherichia coli, GI1786618, Length=125, Percent_Identity=44, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 18297; Mature: 18166

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPETGKPAAGTKPAARTEAKAPPKSARRRSRELALQGLYQWLLNRNDIGAIQAHLHD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AQGFNKADSEHFDALLNGAVREEARLTAAFEPFLDRKVEELSPVERAALLVGSYELVHCV
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHC
DIPYKVVINEAVELTKTFGGVEGYKYVNGVLDKLAAQVRSAEVAARR
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDTPETGKPAAGTKPAARTEAKAPPKSARRRSRELALQGLYQWLLNRNDIGAIQAHLHD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AQGFNKADSEHFDALLNGAVREEARLTAAFEPFLDRKVEELSPVERAALLVGSYELVHCV
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHC
DIPYKVVINEAVELTKTFGGVEGYKYVNGVLDKLAAQVRSAEVAARR
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA