Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73540373
Identifier: 73540373
GI number: 73540373
Start: 715233
End: 716450
Strand: Direct
Name: 73540373
Synonym: Reut_A0667
Alternate gene names: NA
Gene position: 715233-716450 (Clockwise)
Preceding gene: 73540371
Following gene: 73540377
Centisome position: 18.79
GC content: 67.32
Gene sequence:
>1218_bases ATGGTCACCGGCCGCCTACGCGTTGTCATCGTCAAGCTGCACCTGTATATCGGGCTGATCTTCGGCCTGTTGTTCGTCCT GATGGGGCTGACCGGCACTACCATCGCATGGCGCGACGAGCTCGATGCATGGCTGAATCCCGATCTGCTGGTGGCATCGG CGCCCGTGCGGATGCCGGTGTCCTCCGATACGGTGCAGGCCGTCACCGAGCGCCTGTCCGGCCCCGGCTATGGCCGGCCG AACATGCTGATGCTGCCGGTGGAGGAACACGGCGTCTTCGTCGCCTGGTATCCGGTCAAGGGACCCGATGGCGTGGTGCC GGGCCGCTCGCGCCAGGTCATGGTCGATCCGGTCACGTTCGAAGTGAAGGGCGAGCGGGTGTGGGGCGAGTTTGGCCTGT CGCGCCAGTTGCTGCTGCCGACGCTGTTCCATCTGCACCGCTACCTGCTCAGCGGCGAAACCGGCAAGACCATCACAGGT GTGACCGGCATGATGCTGCTGATCATGGTGCTGCTCGGCATTGTGGCATGGTGGCCGAAGCTGCGGCCGCGCTCCGTGTT CCAGGCGTTCCGCATCACGCATGGCGGCTCGTGGTCGCGCTTCACCTATACGTTGCACCGTGCGGGCGGCATCTTTGCCG CGCCGGTGCTGGCGACCATCGCTTTCTCGGGCTGGTACCTGAACCTGCCGAAGTGGGTGACGCCCATCGTTTCCAGCGTC ATGACGGTGACGCCGCCGGCCAAGCATGCATCGGCACCCGCCGAGCCCGGTGCGCGGCCGCTCGGCGCCGCGCAGATCAT GGCGACCGCCCAAGCCGAATATCCCGACGCCACCGTGACCCGCATCAGTTTTCCTCGTAAGGCGGGCGATGCCTATGAAG TGCGCCTGCGCCAGCCCGACGAGGTGCGCAAGGACAGCGGCGCTACGCGGCTATGGCTAGATGCCTATACCGGCAAGCGC CTTGGCGCGCGCGACCCGGCCGATGCGCCGGCCGGCGACACCTTCCTGAACTGGCTGTTCCCGCTGCATACGGGCGAGGC CTTCGGCGTGCCCGGCCGCCTCTTCATCACCGTCTTTGGCCTGGCGCCGCTGATGTTCGGGATCACCGGCGTGCTGATCT GGTGGAAGCGCCGGCGCGGGCACCAGCGCCACGTGACCAAGGTCCGCCAGCGGGCCGGCATCCGCAGCACGCGCAGCGCT GAAAAGGCCGAGGCCTGA
Upstream 100 bases:
>100_bases GCTCGTACCCTGATAGAATTGCGAATCTTTCCCATTTGCATTGTCGGGGCTGGCACCACGCGCCTTTCCTGCCGACTCCC ACAATCCCTTCTGTCGCCCA
Downstream 100 bases:
>100_bases AATGCAAAGAGCAAGCCGCAAGGCTTGCTCTTCTTGTCTGGGCGAAGTGGCCGCTGGCCGCGGGGCTCAGATTTCGAGGT TGTCGATGAGGCGGGTGGCG
Product: PepSY-associated TM helix
Products: NA
Alternate protein names: PepSY-Associated TM Helix; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family; Iron-Regulated Membrane Protein; Iron-Uptake Factor; Flavodoxin/Nitric Oxide Synthase; Peptidase; Rare Lipoprotein B; Oxidoreductase; Transmembrane Protein; Transporter-Like Membrane Protein; Pepsy-Associated Tm Helix Domain Protein; Sulfite Reductase Flavoprotein Component
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MVTGRLRVVIVKLHLYIGLIFGLLFVLMGLTGTTIAWRDELDAWLNPDLLVASAPVRMPVSSDTVQAVTERLSGPGYGRP NMLMLPVEEHGVFVAWYPVKGPDGVVPGRSRQVMVDPVTFEVKGERVWGEFGLSRQLLLPTLFHLHRYLLSGETGKTITG VTGMMLLIMVLLGIVAWWPKLRPRSVFQAFRITHGGSWSRFTYTLHRAGGIFAAPVLATIAFSGWYLNLPKWVTPIVSSV MTVTPPAKHASAPAEPGARPLGAAQIMATAQAEYPDATVTRISFPRKAGDAYEVRLRQPDEVRKDSGATRLWLDAYTGKR LGARDPADAPAGDTFLNWLFPLHTGEAFGVPGRLFITVFGLAPLMFGITGVLIWWKRRRGHQRHVTKVRQRAGIRSTRSA EKAEA
Sequences:
>Translated_405_residues MVTGRLRVVIVKLHLYIGLIFGLLFVLMGLTGTTIAWRDELDAWLNPDLLVASAPVRMPVSSDTVQAVTERLSGPGYGRP NMLMLPVEEHGVFVAWYPVKGPDGVVPGRSRQVMVDPVTFEVKGERVWGEFGLSRQLLLPTLFHLHRYLLSGETGKTITG VTGMMLLIMVLLGIVAWWPKLRPRSVFQAFRITHGGSWSRFTYTLHRAGGIFAAPVLATIAFSGWYLNLPKWVTPIVSSV MTVTPPAKHASAPAEPGARPLGAAQIMATAQAEYPDATVTRISFPRKAGDAYEVRLRQPDEVRKDSGATRLWLDAYTGKR LGARDPADAPAGDTFLNWLFPLHTGEAFGVPGRLFITVFGLAPLMFGITGVLIWWKRRRGHQRHVTKVRQRAGIRSTRSA EKAEA >Mature_405_residues MVTGRLRVVIVKLHLYIGLIFGLLFVLMGLTGTTIAWRDELDAWLNPDLLVASAPVRMPVSSDTVQAVTERLSGPGYGRP NMLMLPVEEHGVFVAWYPVKGPDGVVPGRSRQVMVDPVTFEVKGERVWGEFGLSRQLLLPTLFHLHRYLLSGETGKTITG VTGMMLLIMVLLGIVAWWPKLRPRSVFQAFRITHGGSWSRFTYTLHRAGGIFAAPVLATIAFSGWYLNLPKWVTPIVSSV MTVTPPAKHASAPAEPGARPLGAAQIMATAQAEYPDATVTRISFPRKAGDAYEVRLRQPDEVRKDSGATRLWLDAYTGKR LGARDPADAPAGDTFLNWLFPLHTGEAFGVPGRLFITVFGLAPLMFGITGVLIWWKRRRGHQRHVTKVRQRAGIRSTRSA EKAEA
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44707; Mature: 44707
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTGRLRVVIVKLHLYIGLIFGLLFVLMGLTGTTIAWRDELDAWLNPDLLVASAPVRMPV CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCEEEECCCEECCC SSDTVQAVTERLSGPGYGRPNMLMLPVEEHGVFVAWYPVKGPDGVVPGRSRQVMVDPVTF CCHHHHHHHHHHCCCCCCCCCEEEEEEHHCCEEEEEEECCCCCCCCCCCCCEEEECCEEE EVKGERVWGEFGLSRQLLLPTLFHLHRYLLSGETGKTITGVTGMMLLIMVLLGIVAWWPK EEECCEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC LRPRSVFQAFRITHGGSWSRFTYTLHRAGGIFAAPVLATIAFSGWYLNLPKWVTPIVSSV CCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEECHHHHHHHHHHH MTVTPPAKHASAPAEPGARPLGAAQIMATAQAEYPDATVTRISFPRKAGDAYEVRLRQPD EECCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCH EVRKDSGATRLWLDAYTGKRLGARDPADAPAGDTFLNWLFPLHTGEAFGVPGRLFITVFG HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH LAPLMFGITGVLIWWKRRRGHQRHVTKVRQRAGIRSTRSAEKAEA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHCCC >Mature Secondary Structure MVTGRLRVVIVKLHLYIGLIFGLLFVLMGLTGTTIAWRDELDAWLNPDLLVASAPVRMPV CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCEEEECCCEECCC SSDTVQAVTERLSGPGYGRPNMLMLPVEEHGVFVAWYPVKGPDGVVPGRSRQVMVDPVTF CCHHHHHHHHHHCCCCCCCCCEEEEEEHHCCEEEEEEECCCCCCCCCCCCCEEEECCEEE EVKGERVWGEFGLSRQLLLPTLFHLHRYLLSGETGKTITGVTGMMLLIMVLLGIVAWWPK EEECCEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC LRPRSVFQAFRITHGGSWSRFTYTLHRAGGIFAAPVLATIAFSGWYLNLPKWVTPIVSSV CCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEECHHHHHHHHHHH MTVTPPAKHASAPAEPGARPLGAAQIMATAQAEYPDATVTRISFPRKAGDAYEVRLRQPD EECCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCH EVRKDSGATRLWLDAYTGKRLGARDPADAPAGDTFLNWLFPLHTGEAFGVPGRLFITVFG HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH LAPLMFGITGVLIWWKRRRGHQRHVTKVRQRAGIRSTRSAEKAEA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA