Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is yhhW [C]
Identifier: 73540032
GI number: 73540032
Start: 355668
End: 356543
Strand: Direct
Name: yhhW [C]
Synonym: Reut_A0326
Alternate gene names: 73540032
Gene position: 355668-356543 (Clockwise)
Preceding gene: 73540030
Following gene: 73540038
Centisome position: 9.34
GC content: 65.64
Gene sequence:
>876_bases ATGTCTGCCATCGAACACTTGCTCAAGCCCCATGTGCGGGACCTGGGCGATTTCACTGTGCGTCGCCTCCTGCCGGCAGC GGCGACCCAGACCATCGGCCCGTTCATCTTCTTTGATCACATGGGACCCGTGGCGATGCCGCCGGGGAAGGGCGCCGATG TGCGCCCGCATCCGCATATCGGACTGGCCACGGTCACCTATCTGTTCGAAGGCGAGATCATGCACCGCGACAGTCTCGGC AGCGAGCAGGTGATCCGGCCCGGTGACGTGAACTGGATGACGGCCGGCAACGGCATTGTGCACTCCGAACGCTCGCCCGA CGCCGTGCGCGAAGCCGGCGCAAGGCTGCACGGTATCCAGACCTGGGTGGCGCTGCCCAAGGACCACGAAACTGTCGCGC CCTCGTTCTTCCATCATCCGGGCGCCACGCTGCCGAAGATTGAACAGCCGGGGGTGCGCATGACGGTGATTGCCGGAGAT GCCTTTGGCAAGACTTCGCCGGTCACGGTGTTCAGCCGCACGCTGTACGTAGCGATCGAGATGGACGCCGGCGCGACCCT GGAGATTCCCGCCGAGCATGCCGAGCGGGGCGTCTACCCGGTCGACGGCAGCGTGGCGCTCGACGGCGAAACCTTGCCCT CCGAGCATCTGGTCGTGCTGACGCCCGGTCAGGCGGTGACGTTGACCGCCACGGCGCCATCGCGCGTGATGCTGCTCGGC GGCGATCCCACGGACGGCCACCGATTCATCTTCTGGAACTTCGTGGCCAGCAGTAAAGAGGCTATCGAAGCCGCTTCGCA GCGCTGGGAGGACGACCAGTTTCCCCTCGTTCCCGGCGAAACGGAGCGCATTCCGCTGCCCCAGCGCAAATCCTGA
Upstream 100 bases:
>100_bases GGTTCGCACCGCCTGGCGGGATACTGTGTTGCACCACCCGCTACACTGGCAGTGCTGGCGCACGCCACGGCCAATAAAGC CCCTACAAACCGGAGAACCT
Downstream 100 bases:
>100_bases GCAGCGGACGGACTGGCGCCGCTCAGAGCGGGCTTGCCCAGGCGACGCGCGTGCCTTGCTGCAGGCATTCCTGAATGGCG CGCACCTGGGTGGCGATCGG
Product: Pirin, N-terminal:Pirin, C-terminal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSAIEHLLKPHVRDLGDFTVRRLLPAAATQTIGPFIFFDHMGPVAMPPGKGADVRPHPHIGLATVTYLFEGEIMHRDSLG SEQVIRPGDVNWMTAGNGIVHSERSPDAVREAGARLHGIQTWVALPKDHETVAPSFFHHPGATLPKIEQPGVRMTVIAGD AFGKTSPVTVFSRTLYVAIEMDAGATLEIPAEHAERGVYPVDGSVALDGETLPSEHLVVLTPGQAVTLTATAPSRVMLLG GDPTDGHRFIFWNFVASSKEAIEAASQRWEDDQFPLVPGETERIPLPQRKS
Sequences:
>Translated_291_residues MSAIEHLLKPHVRDLGDFTVRRLLPAAATQTIGPFIFFDHMGPVAMPPGKGADVRPHPHIGLATVTYLFEGEIMHRDSLG SEQVIRPGDVNWMTAGNGIVHSERSPDAVREAGARLHGIQTWVALPKDHETVAPSFFHHPGATLPKIEQPGVRMTVIAGD AFGKTSPVTVFSRTLYVAIEMDAGATLEIPAEHAERGVYPVDGSVALDGETLPSEHLVVLTPGQAVTLTATAPSRVMLLG GDPTDGHRFIFWNFVASSKEAIEAASQRWEDDQFPLVPGETERIPLPQRKS >Mature_290_residues SAIEHLLKPHVRDLGDFTVRRLLPAAATQTIGPFIFFDHMGPVAMPPGKGADVRPHPHIGLATVTYLFEGEIMHRDSLGS EQVIRPGDVNWMTAGNGIVHSERSPDAVREAGARLHGIQTWVALPKDHETVAPSFFHHPGATLPKIEQPGVRMTVIAGDA FGKTSPVTVFSRTLYVAIEMDAGATLEIPAEHAERGVYPVDGSVALDGETLPSEHLVVLTPGQAVTLTATAPSRVMLLGG DPTDGHRFIFWNFVASSKEAIEAASQRWEDDQFPLVPGETERIPLPQRKS
Specific function: Unknown
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=254, Percent_Identity=31.496062992126, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI4505823, Length=254, Percent_Identity=31.496062992126, Blast_Score=108, Evalue=7e-24, Organism=Escherichia coli, GI1789847, Length=188, Percent_Identity=27.1276595744681, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: NA
Molecular weight: Translated: 31514; Mature: 31383
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIEHLLKPHVRDLGDFTVRRLLPAAATQTIGPFIFFDHMGPVAMPPGKGADVRPHPHI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC GLATVTYLFEGEIMHRDSLGSEQVIRPGDVNWMTAGNGIVHSERSPDAVREAGARLHGIQ CCEEEEEEECCCEEECCCCCCCCCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHEEEE TWVALPKDHETVAPSFFHHPGATLPKIEQPGVRMTVIAGDAFGKTSPVTVFSRTLYVAIE EEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEE MDAGATLEIPAEHAERGVYPVDGSVALDGETLPSEHLVVLTPGQAVTLTATAPSRVMLLG ECCCCEEEECHHHHHCCCEECCCCEEECCCCCCCCCEEEECCCCEEEEEECCCCEEEEEE GDPTDGHRFIFWNFVASSKEAIEAASQRWEDDQFPLVPGETERIPLPQRKS CCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAIEHLLKPHVRDLGDFTVRRLLPAAATQTIGPFIFFDHMGPVAMPPGKGADVRPHPHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC GLATVTYLFEGEIMHRDSLGSEQVIRPGDVNWMTAGNGIVHSERSPDAVREAGARLHGIQ CCEEEEEEECCCEEECCCCCCCCCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHEEEE TWVALPKDHETVAPSFFHHPGATLPKIEQPGVRMTVIAGDAFGKTSPVTVFSRTLYVAIE EEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEE MDAGATLEIPAEHAERGVYPVDGSVALDGETLPSEHLVVLTPGQAVTLTATAPSRVMLLG ECCCCEEEECHHHHHCCCEECCCCEEECCCCCCCCCEEEECCCCEEEEEECCCCEEEEEE GDPTDGHRFIFWNFVASSKEAIEAASQRWEDDQFPLVPGETERIPLPQRKS CCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]