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The map label for this gene is 73540030

Identifier: 73540030

GI number: 73540030

Start: 353632

End: 354327

Strand: Direct

Name: 73540030

Synonym: Reut_A0324

Alternate gene names: NA

Gene position: 353632-354327 (Clockwise)

Preceding gene: 73540029

Following gene: 73540032

Centisome position: 9.29

GC content: 62.07

Gene sequence:

>696_bases
ATGGGCGATACTGTGTGCTGCCCTCGCCATCGCGGCGCCTCGGATTTGCCGGCGCCCCTCGACTTCCGATTTCCCATGAC
CAAGCCAAGCCAGCCCCACGGGCTCTTCGCCTCATTCCGCCGCTTTGCCGCGCTCGCATTCCTCGCCCTCGCCCTGGCAG
CCTGCGGACAACAGAAGGCGTCTTTCCGGAACGTCGACATCAGCGGCGGGGCCGATTTCGGCAAGGATTTCTCGCTGATC
GACCACAACGGCAAAGTCCGGACGATTTCGGACTTCAAGGGCAAGGTTGTCGTGATGTTCTTCGGCTACACCCATTGCCC
GGATGTCTGCCCGACCACCATGGCGGAGTTGAAGGCGGTCATGGAGCAGCTTGGGCCGGATGCGGACAAGGTGCAGGTGT
TGTTCGTGACGGTGGATCCGGAGCGGGATACCCAGGCGCTGTTGGCGCAGTACGTGCCGGCGTTTGATCCGCGTTTCCTG
GGCATGCGACCGGCCGATGAGGCTGCGTTGCAGAAGGTGGCGAAGGACTTCAAGGTCTACTACGCCAAGGTACCGGGTAC
GTCGCCCAACAACTACACCATGGATCACTCGGCTGGCAGCTACGTGTTCGACCCGGAAGGGCATCTGCGGCTGTTCATTC
GTCACGGCCAGGGACCAGAGCCCATCGCCCACGATATCAAGCAGTTGCTGTCCTGA

Upstream 100 bases:

>100_bases
GCTGATCGATCACTACTTCAAGTTCGTGCCCCAGATCTGAGCGGTCTGGAGCTTCGCGGCCTGCGGCATCTTGTCGCGGC
CGCGGTGCCGCACAGCACGA

Downstream 100 bases:

>100_bases
GAGACGGCACGGCAATGAAAAAAGGCCGGTCCACTGGACCGGCCTTTTGCATGGCGCCTCGTTAGCGCCGGGGGTCAGGC
AAACGCCTGCAACGCCCCCT

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MGDTVCCPRHRGASDLPAPLDFRFPMTKPSQPHGLFASFRRFAALAFLALALAACGQQKASFRNVDISGGADFGKDFSLI
DHNGKVRTISDFKGKVVVMFFGYTHCPDVCPTTMAELKAVMEQLGPDADKVQVLFVTVDPERDTQALLAQYVPAFDPRFL
GMRPADEAALQKVAKDFKVYYAKVPGTSPNNYTMDHSAGSYVFDPEGHLRLFIRHGQGPEPIAHDIKQLLS

Sequences:

>Translated_231_residues
MGDTVCCPRHRGASDLPAPLDFRFPMTKPSQPHGLFASFRRFAALAFLALALAACGQQKASFRNVDISGGADFGKDFSLI
DHNGKVRTISDFKGKVVVMFFGYTHCPDVCPTTMAELKAVMEQLGPDADKVQVLFVTVDPERDTQALLAQYVPAFDPRFL
GMRPADEAALQKVAKDFKVYYAKVPGTSPNNYTMDHSAGSYVFDPEGHLRLFIRHGQGPEPIAHDIKQLLS
>Mature_230_residues
GDTVCCPRHRGASDLPAPLDFRFPMTKPSQPHGLFASFRRFAALAFLALALAACGQQKASFRNVDISGGADFGKDFSLID
HNGKVRTISDFKGKVVVMFFGYTHCPDVCPTTMAELKAVMEQLGPDADKVQVLFVTVDPERDTQALLAQYVPAFDPRFLG
MRPADEAALQKVAKDFKVYYAKVPGTSPNNYTMDHSAGSYVFDPEGHLRLFIRHGQGPEPIAHDIKQLLS

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=182, Percent_Identity=35.1648351648352, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI281182722, Length=182, Percent_Identity=35.1648351648352, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI281182716, Length=182, Percent_Identity=35.1648351648352, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI153791313, Length=182, Percent_Identity=35.1648351648352, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI4759068, Length=141, Percent_Identity=34.7517730496454, Blast_Score=104, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17531419, Length=164, Percent_Identity=31.7073170731707, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6319498, Length=224, Percent_Identity=31.6964285714286, Blast_Score=104, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6319511, Length=144, Percent_Identity=34.0277777777778, Blast_Score=89, Evalue=7e-19,
Organism=Drosophila melanogaster, GI19920710, Length=143, Percent_Identity=39.1608391608392, Blast_Score=124, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 25395; Mature: 25264

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDTVCCPRHRGASDLPAPLDFRFPMTKPSQPHGLFASFRRFAALAFLALALAACGQQKA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SFRNVDISGGADFGKDFSLIDHNGKVRTISDFKGKVVVMFFGYTHCPDVCPTTMAELKAV
CCCCEECCCCCCCCCCCEEEECCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
MEQLGPDADKVQVLFVTVDPERDTQALLAQYVPAFDPRFLGMRPADEAALQKVAKDFKVY
HHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEE
YAKVPGTSPNNYTMDHSAGSYVFDPEGHLRLFIRHGQGPEPIAHDIKQLLS
EEECCCCCCCCEEECCCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHC
>Mature Secondary Structure 
GDTVCCPRHRGASDLPAPLDFRFPMTKPSQPHGLFASFRRFAALAFLALALAACGQQKA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SFRNVDISGGADFGKDFSLIDHNGKVRTISDFKGKVVVMFFGYTHCPDVCPTTMAELKAV
CCCCEECCCCCCCCCCCEEEECCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
MEQLGPDADKVQVLFVTVDPERDTQALLAQYVPAFDPRFLGMRPADEAALQKVAKDFKVY
HHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEE
YAKVPGTSPNNYTMDHSAGSYVFDPEGHLRLFIRHGQGPEPIAHDIKQLLS
EEECCCCCCCCEEECCCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA