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The map label for this gene is secB [H]

Identifier: 73540013

GI number: 73540013

Start: 338758

End: 339276

Strand: Direct

Name: secB [H]

Synonym: Reut_A0307

Alternate gene names: 73540013

Gene position: 338758-339276 (Clockwise)

Preceding gene: 73540012

Following gene: 73540014

Centisome position: 8.9

GC content: 63.01

Gene sequence:

>519_bases
ATGAGCGACCAGCAAAACACCCAGCAGGAAGACCAACCCTTCTTCAACATCCAGCGCGTGTACCTCAAGGACATGTCGCT
CGAGCAGCCGAACTCGCCGGGCATCTTCCTCGAATCGGAAGCGCCGTCGGTCGAAGTCCAGGTCAACGTGGCCGCTTCGC
AGCTGCAGGAAGGCATCTTCGAAGTGGTGGTGACGGGCACCGTGACGACCAAGGTCCAGGAAAAGGTCGCTTTCCTCGTG
GAAGCGCACCAGGCCGGCATCTTCGACATCCGCAACGTGCCGGTCGAGCAGCTCGACCCGCTGCTGGGCATTGCCTGCCC
GACCATCCTGTATCCGTACCTGCGCGGCAATATTGCGGACGTCATCACGCGTGCAGGCTTCCAGGCCATCCACCTGTCGG
AAATCAACTTCCAGGCCCTGTACGAGCAGCGCCTGCAGGCCGCCATGGAAGAAGCCCAGGCCGCCGGCGGCGCCAACAGC
GGCATCGTGATGCCTGACGGCAGCCAGGCTCGCCACTGA

Upstream 100 bases:

>100_bases
ATATTGCCACCCGCGTCATGTACCATATGCGTTTTCCAACCGGGCGCAGGCTCGTGCCGCACCCGGCCGCCGCGTCCAAC
GCCCATCCCGGAAGCCTTTC

Downstream 100 bases:

>100_bases
TCCGGCAGTCCCGCACTGCCTGACGAAACGGGGCTGCGGCCCCGTTTTGCCTTTTCGGGGCCCGCGCACAGGGCTACCAT
CGATTGCGCCGATCCACCGT

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSDQQNTQQEDQPFFNIQRVYLKDMSLEQPNSPGIFLESEAPSVEVQVNVAASQLQEGIFEVVVTGTVTTKVQEKVAFLV
EAHQAGIFDIRNVPVEQLDPLLGIACPTILYPYLRGNIADVITRAGFQAIHLSEINFQALYEQRLQAAMEEAQAAGGANS
GIVMPDGSQARH

Sequences:

>Translated_172_residues
MSDQQNTQQEDQPFFNIQRVYLKDMSLEQPNSPGIFLESEAPSVEVQVNVAASQLQEGIFEVVVTGTVTTKVQEKVAFLV
EAHQAGIFDIRNVPVEQLDPLLGIACPTILYPYLRGNIADVITRAGFQAIHLSEINFQALYEQRLQAAMEEAQAAGGANS
GIVMPDGSQARH
>Mature_171_residues
SDQQNTQQEDQPFFNIQRVYLKDMSLEQPNSPGIFLESEAPSVEVQVNVAASQLQEGIFEVVVTGTVTTKVQEKVAFLVE
AHQAGIFDIRNVPVEQLDPLLGIACPTILYPYLRGNIADVITRAGFQAIHLSEINFQALYEQRLQAAMEEAQAAGGANSG
IVMPDGSQARH

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=146, Percent_Identity=41.0958904109589, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 18857; Mature: 18726

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS00296 CHAPERONINS_CPN60

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQQNTQQEDQPFFNIQRVYLKDMSLEQPNSPGIFLESEAPSVEVQVNVAASQLQEGIF
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHH
EVVVTGTVTTKVQEKVAFLVEAHQAGIFDIRNVPVEQLDPLLGIACPTILYPYLRGNIAD
HHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
VITRAGFQAIHLSEINFQALYEQRLQAAMEEAQAAGGANSGIVMPDGSQARH
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
SDQQNTQQEDQPFFNIQRVYLKDMSLEQPNSPGIFLESEAPSVEVQVNVAASQLQEGIF
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHH
EVVVTGTVTTKVQEKVAFLVEAHQAGIFDIRNVPVEQLDPLLGIACPTILYPYLRGNIAD
HHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
VITRAGFQAIHLSEINFQALYEQRLQAAMEEAQAAGGANSGIVMPDGSQARH
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA