| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is cdsA [H]
Identifier: 71893885
GI number: 71893885
Start: 692362
End: 693288
Strand: Reverse
Name: cdsA [H]
Synonym: MHJ_0534
Alternate gene names: 71893885
Gene position: 693288-692362 (Counterclockwise)
Preceding gene: 71893886
Following gene: 71893884
Centisome position: 77.25
GC content: 23.62
Gene sequence:
>927_bases ATGAGCCTATCCTGGCCTAAAAAATTACCAGCTGATTTTTTTATCAGGTTTTTAGTTGCTTTTTTAGTTTTAGTAGTTGT TTTCCCGGCTTTATTTATTGGTTATTACTTTATTTTTTGAGGTCGGATTTTTTCCTTTATTTTTTTAGGTTGTCTTTTAT TTTATAGTCTTTTTGAGATTTTCAATCATTTTCAGTCAAAAAAAATCTATACTTTTTTACTAGCATTTTTGGGTATTTTT TTATTTGTATTACCAGTAAGAAAAGATTTAATTGAAACTAGTTTTTCAAAAGATGCAAATTTTGACTGAAATCTAGCATT TTTTTTAATTAAATGGCAATTTTTAGATTATCACATTTTTTTTATTTTTCCACTTACTTTAATAGTTAGTTTTTTTGATA ATAAAATTGAAAAAACAGGAGGATTTTTTCTTGCTGGAATACTAAAATTTAGTATCATTTTTATATCGACTTTGTTTTTT AAATCACTATGAATTTTAAATACTTTTAACTTTTTTTTAGTCATTTTTTTAATTTCGATTCCAATAACTAGCGATACTTT TGGTTATCTTTTTGGTTCAATTTTTGCTAAAAAATTTTTTAGGACAAATTTTAATTTTTCACCGAAAAAATCAGTTGAAG GCTTTATTAGTTCCTTTATTTTTTCATTGATTTTGGTAATATCTATAATTCTTAATTTCGATTTTAATATTTCAACTGGT AGAGATCTATTATTAAAAATTTTGACAATTTTGTTATTGCCTTCTGCTGCAATTATCGGCGATATTTTTTTCTCAATTAT AAAAAGATACTTAAAAATAAAGGATTTTTCGAAAATTATCAAAGGTCATGGAGGAATTTTTGACCGGCTTGATTCGATTT CTTTTGTATTTTTAGTATTCTCATTTATTGTAATTACAGTTAGTTAG
Upstream 100 bases:
>100_bases AAAGATTATCTTGGTCAAGTTCAGAAAAATATTAATTCTGAAATAGAAAAAATTGATCAACTTTTTGATAAAAAAGTAAA AGCAATTCAAACAATTTAAA
Downstream 100 bases:
>100_bases TTTTTGTTTTTTAAATACAAGGAGAGGGTAAAAATGAATACAAAATTCAGAAAATTTTCCCAATTAATAAATTGATCAAA TCCATATGACTGAGATGATG
Product: putative phosphatidate cytidylyltransferase synthase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSLSWPKKLPADFFIRFLVAFLVLVVVFPALFIGYYFIFWGRIFSFIFLGCLLFYSLFEIFNHFQSKKIYTFLLAFLGIF LFVLPVRKDLIETSFSKDANFDWNLAFFLIKWQFLDYHIFFIFPLTLIVSFFDNKIEKTGGFFLAGILKFSIIFISTLFF KSLWILNTFNFFLVIFLISIPITSDTFGYLFGSIFAKKFFRTNFNFSPKKSVEGFISSFIFSLILVISIILNFDFNISTG RDLLLKILTILLLPSAAIIGDIFFSIIKRYLKIKDFSKIIKGHGGIFDRLDSISFVFLVFSFIVITVS
Sequences:
>Translated_308_residues MSLSWPKKLPADFFIRFLVAFLVLVVVFPALFIGYYFIF*GRIFSFIFLGCLLFYSLFEIFNHFQSKKIYTFLLAFLGIF LFVLPVRKDLIETSFSKDANFD*NLAFFLIKWQFLDYHIFFIFPLTLIVSFFDNKIEKTGGFFLAGILKFSIIFISTLFF KSL*ILNTFNFFLVIFLISIPITSDTFGYLFGSIFAKKFFRTNFNFSPKKSVEGFISSFIFSLILVISIILNFDFNISTG RDLLLKILTILLLPSAAIIGDIFFSIIKRYLKIKDFSKIIKGHGGIFDRLDSISFVFLVFSFIVITVS >Mature_307_residues SLSWPKKLPADFFIRFLVAFLVLVVVFPALFIGYYFIF*GRIFSFIFLGCLLFYSLFEIFNHFQSKKIYTFLLAFLGIFL FVLPVRKDLIETSFSKDANFD*NLAFFLIKWQFLDYHIFFIFPLTLIVSFFDNKIEKTGGFFLAGILKFSIIFISTLFFK SL*ILNTFNFFLVIFLISIPITSDTFGYLFGSIFAKKFFRTNFNFSPKKSVEGFISSFIFSLILVISIILNFDFNISTGR DLLLKILTILLLPSAAIIGDIFFSIIKRYLKIKDFSKIIKGHGGIFDRLDSISFVFLVFSFIVITVS
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=164, Percent_Identity=26.8292682926829, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787677, Length=118, Percent_Identity=32.2033898305085, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 35330; Mature: 35199
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSWPKKLPADFFIRFLVAFLVLVVVFPALFIGYYFIFGRIFSFIFLGCLLFYSLFEIF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHFQSKKIYTFLLAFLGIFLFVLPVRKDLIETSFSKDANFDNLAFFLIKWQFLDYHIFFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH FPLTLIVSFFDNKIEKTGGFFLAGILKFSIIFISTLFFKSLILNTFNFFLVIFLISIPIT HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDTFGYLFGSIFAKKFFRTNFNFSPKKSVEGFISSFIFSLILVISIILNFDFNISTGRDL CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LLKILTILLLPSAAIIGDIFFSIIKRYLKIKDFSKIIKGHGGIFDRLDSISFVFLVFSFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VITVS HHHCC >Mature Secondary Structure SLSWPKKLPADFFIRFLVAFLVLVVVFPALFIGYYFIFGRIFSFIFLGCLLFYSLFEIF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHFQSKKIYTFLLAFLGIFLFVLPVRKDLIETSFSKDANFDNLAFFLIKWQFLDYHIFFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH FPLTLIVSFFDNKIEKTGGFFLAGILKFSIIFISTLFFKSLILNTFNFFLVIFLISIPIT HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDTFGYLFGSIFAKKFFRTNFNFSPKKSVEGFISSFIFSLILVISIILNFDFNISTGRDL CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LLKILTILLLPSAAIIGDIFFSIIKRYLKIKDFSKIIKGHGGIFDRLDSISFVFLVFSFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VITVS HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA